BLASTX nr result

ID: Coptis24_contig00000565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000565
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAO78600.1| endochitinase and N-acetylglucosamine-binding he...    80   1e-13
pdb|2GSJ|A Chain A, Cdna Cloning And 1.75a Crystal Structure Det...    80   1e-13
ref|XP_002279661.1| PREDICTED: acidic endochitinase [Vitis vinif...    79   3e-13
emb|CAA09110.1| chitinase [Hevea brasiliensis] gi|119871519|gb|A...    78   6e-13
pdb|1KQY|A Chain A, Hevamine Mutant D125aE127AY183F IN COMPLEX W...    78   6e-13

>emb|CAO78600.1| endochitinase and N-acetylglucosamine-binding hemagglutinin
           precursor [Parkia platycephala]
          Length = 266

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = +1

Query: 280 IRSCQRKGIKVMXXXXXXXXXXXXXXXEDARQVADYLWNNFLGGKSTSRPLGDAVLDGID 459
           IR+CQR+GIKVM               +DAR VADY+WNNFLGG+S+SRPLGDAVLDG+D
Sbjct: 59  IRACQRRGIKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLDGVD 118


>pdb|2GSJ|A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of
           Ppl2, A Novel Chimerolectin From Parkia Platycephala
           Seeds Exhibiting Endochitinolytic Activity
          Length = 271

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = +1

Query: 280 IRSCQRKGIKVMXXXXXXXXXXXXXXXEDARQVADYLWNNFLGGKSTSRPLGDAVLDGID 459
           IR+CQR+GIKVM               +DAR VADY+WNNFLGG+S+SRPLGDAVLDG+D
Sbjct: 64  IRACQRRGIKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLDGVD 123


>ref|XP_002279661.1| PREDICTED: acidic endochitinase [Vitis vinifera]
           gi|297745380|emb|CBI40460.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/60 (63%), Positives = 44/60 (73%)
 Frame = +1

Query: 280 IRSCQRKGIKVMXXXXXXXXXXXXXXXEDARQVADYLWNNFLGGKSTSRPLGDAVLDGID 459
           IR+CQ +GIKV+               EDARQVA+YLWNNFLGG+S+SRPLGDAVLDGID
Sbjct: 86  IRACQNQGIKVLLSLGGAGGSPFLTSAEDARQVAEYLWNNFLGGQSSSRPLGDAVLDGID 145


>emb|CAA09110.1| chitinase [Hevea brasiliensis] gi|119871519|gb|ABI32402.2|
           chitinase [Hevea brasiliensis]
          Length = 311

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/60 (65%), Positives = 42/60 (70%)
 Frame = +1

Query: 280 IRSCQRKGIKVMXXXXXXXXXXXXXXXEDARQVADYLWNNFLGGKSTSRPLGDAVLDGID 459
           IRSCQ +GIKVM                DA+ VADYLWNNFLGGKS+SRPLGDAVLDGID
Sbjct: 90  IRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGID 149


>pdb|1KQY|A Chain A, Hevamine Mutant D125aE127AY183F IN COMPLEX WITH PENTA-Nag
           gi|18655734|pdb|1KQZ|A Chain A, Hevamine Mutant
           D125aE127AY183F IN COMPLEX WITH TETRA-Nag
          Length = 273

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/60 (65%), Positives = 42/60 (70%)
 Frame = +1

Query: 280 IRSCQRKGIKVMXXXXXXXXXXXXXXXEDARQVADYLWNNFLGGKSTSRPLGDAVLDGID 459
           IRSCQ +GIKVM                DA+ VADYLWNNFLGGKS+SRPLGDAVLDGID
Sbjct: 64  IRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGID 123


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