BLASTX nr result

ID: Coptis24_contig00000557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000557
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002970237.1| hypothetical protein SELMODRAFT_411087 [Sela...   118   4e-25
ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group] g...   117   8e-25
ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group] g...   117   8e-25
tpg|DAA52377.1| TPA: putative translation elongation factor fami...   117   8e-25
gb|AFW85122.1| putative translation elongation factor family pro...   117   8e-25

>ref|XP_002970237.1| hypothetical protein SELMODRAFT_411087 [Selaginella moellendorffii]
           gi|300161753|gb|EFJ28367.1| hypothetical protein
           SELMODRAFT_411087 [Selaginella moellendorffii]
          Length = 842

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/76 (76%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   NCDPEGPLMLYVSKMIPASDXXXXXXXXXXXXXXXSTGTKVRIMGPNYVPGQKKDLYTKS 181
           NCDPEGPLMLYVSKMIPASD               STG KVRIMGPNY+PGQKKDLY KS
Sbjct: 369 NCDPEGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGLKVRIMGPNYIPGQKKDLYVKS 428

Query: 182 VQRTVIWMGKKQESVE 229
           VQRTVIWMGKKQESVE
Sbjct: 429 VQRTVIWMGKKQESVE 444


>ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group]
           gi|49387779|dbj|BAD26337.1| putative elongation factor 2
           [Oryza sativa Japonica Group]
           gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa
           Japonica Group] gi|119395216|gb|ABL74569.1| elongation
           factor 2 [Oryza sativa Japonica Group]
           gi|125539668|gb|EAY86063.1| hypothetical protein
           OsI_07431 [Oryza sativa Indica Group]
           gi|125582310|gb|EAZ23241.1| hypothetical protein
           OsJ_06933 [Oryza sativa Japonica Group]
          Length = 843

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/76 (76%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   NCDPEGPLMLYVSKMIPASDXXXXXXXXXXXXXXXSTGTKVRIMGPNYVPGQKKDLYTKS 181
           NCDPEGPLMLYVSKMIPASD               +TG KVRIMGPNYVPGQKKDLY KS
Sbjct: 369 NCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQKKDLYVKS 428

Query: 182 VQRTVIWMGKKQESVE 229
           VQRTVIWMGKKQESVE
Sbjct: 429 VQRTVIWMGKKQESVE 444


>ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group]
           gi|38344860|emb|CAE01286.2| OSJNBa0020P07.3 [Oryza
           sativa Japonica Group] gi|113563628|dbj|BAF13971.1|
           Os04g0118400 [Oryza sativa Japonica Group]
           gi|116308871|emb|CAH66007.1| H0613H07.5 [Oryza sativa
           Indica Group] gi|119395218|gb|ABL74570.1| elongation
           factor [Oryza sativa Japonica Group]
           gi|125589153|gb|EAZ29503.1| hypothetical protein
           OsJ_13577 [Oryza sativa Japonica Group]
           gi|215704910|dbj|BAG94938.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215715300|dbj|BAG95051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 843

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/76 (76%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   NCDPEGPLMLYVSKMIPASDXXXXXXXXXXXXXXXSTGTKVRIMGPNYVPGQKKDLYTKS 181
           NCDPEGPLMLYVSKMIPASD               +TG KVRIMGPNYVPGQKKDLY KS
Sbjct: 369 NCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQKKDLYVKS 428

Query: 182 VQRTVIWMGKKQESVE 229
           VQRTVIWMGKKQESVE
Sbjct: 429 VQRTVIWMGKKQESVE 444


>tpg|DAA52377.1| TPA: putative translation elongation factor family protein [Zea
           mays]
          Length = 843

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/76 (76%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   NCDPEGPLMLYVSKMIPASDXXXXXXXXXXXXXXXSTGTKVRIMGPNYVPGQKKDLYTKS 181
           NCDPEGPLMLYVSKMIPASD               +TG KVRIMGPNYVPGQKKDLY KS
Sbjct: 369 NCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGMKVRIMGPNYVPGQKKDLYVKS 428

Query: 182 VQRTVIWMGKKQESVE 229
           VQRTVIWMGKKQESVE
Sbjct: 429 VQRTVIWMGKKQESVE 444


>gb|AFW85122.1| putative translation elongation factor family protein [Zea mays]
          Length = 843

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/76 (76%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   NCDPEGPLMLYVSKMIPASDXXXXXXXXXXXXXXXSTGTKVRIMGPNYVPGQKKDLYTKS 181
           NCDPEGPLMLYVSKMIPASD               +TG KVRIMGPNYVPGQKKDLY KS
Sbjct: 369 NCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGMKVRIMGPNYVPGQKKDLYVKS 428

Query: 182 VQRTVIWMGKKQESVE 229
           VQRTVIWMGKKQESVE
Sbjct: 429 VQRTVIWMGKKQESVE 444


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