BLASTX nr result
ID: Coptis24_contig00000555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000555
(3455 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1... 762 0.0
ref|XP_002513846.1| serine hydroxymethyltransferase, putative [R... 761 0.0
ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1... 749 0.0
ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1... 744 0.0
gb|ABO61379.1| serine hydroxymethyltransferase [Populus tremuloi... 741 0.0
>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 577
Score = 762 bits (1967), Expect = 0.0
Identities = 369/471 (78%), Positives = 402/471 (85%), Gaps = 3/471 (0%)
Frame = +1
Query: 1 ESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAVMEALGSHLTN 180
E+RRSAVRAW NQ LC+ADP + +IMEKEK RQ KGIELIASENFVCRAVMEALGSHLTN
Sbjct: 106 EARRSAVRAWGNQRLCVADPDVFDIMEKEKRRQFKGIELIASENFVCRAVMEALGSHLTN 165
Query: 181 KYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCTSANFAVYTGL 360
KYSEGMPGARYY GNQ+ID+IE LCC RAL+AF LD + WGVNVQPYSCTSANFAVYTGL
Sbjct: 166 KYSEGMPGARYYCGNQYIDEIEWLCCKRALKAFDLDPENWGVNVQPYSCTSANFAVYTGL 225
Query: 361 LLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGYIDYDKLEDTA 540
LLP DRIMGLDT SGG+ SHGYYT +G+KVSGASIFFE+LPYKVNP TGYID+DKLE+ A
Sbjct: 226 LLPGDRIMGLDTPSGGNTSHGYYTPNGRKVSGASIFFESLPYKVNPQTGYIDFDKLEERA 285
Query: 541 LVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKACISPFDYCDV 720
L +RPKILICGGSSYPREWDYARFRQIADKCGAVL+CDMA ISGLVAAK C++PFDYCD+
Sbjct: 286 LDFRPKILICGGSSYPREWDYARFRQIADKCGAVLLCDMAQISGLVAAKECVNPFDYCDI 345
Query: 721 VTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFAVFPSLQGGPH 900
VTSTTHKSLRGPRGGI+FYRKG KPRKRG + S GD+ D YD+EE+INFAVFPSLQGGPH
Sbjct: 346 VTSTTHKSLRGPRGGIIFYRKGTKPRKRGMILSQGDDNDHYDYEEKINFAVFPSLQGGPH 405
Query: 901 NNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTDNHLVLWDLRN 1080
NNH KQVA PEY AYM QVKKN VTGGTDNHL+LWDLR
Sbjct: 406 NNHIAALAIALKQVATPEYKAYMLQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLRT 465
Query: 1081 FGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLEADFETIADFL 1251
GLTGKNYEKVCE+C+ITLNK AIFGDNG I GVRIGTPAMTSRGCLEADFETIADFL
Sbjct: 466 LGLTGKNYEKVCEMCHITLNKIAIFGDNGTITPGGVRIGTPAMTSRGCLEADFETIADFL 525
Query: 1252 LRVAQIACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMPAFD 1404
LR AQIA VVQREHG +QK FLKGL++NKD+V+LR RVE FA+ F MP FD
Sbjct: 526 LRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEIFATQFVMPGFD 576
>ref|XP_002513846.1| serine hydroxymethyltransferase, putative [Ricinus communis]
gi|223546932|gb|EEF48429.1| serine
hydroxymethyltransferase, putative [Ricinus communis]
Length = 567
Score = 761 bits (1965), Expect = 0.0
Identities = 369/471 (78%), Positives = 399/471 (84%), Gaps = 3/471 (0%)
Frame = +1
Query: 1 ESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAVMEALGSHLTN 180
ESRR+ VRAW NQPL ADP IHEIMEKEK RQ+KGIELIASENFVCRAVMEALGSHLTN
Sbjct: 96 ESRRAMVRAWGNQPLPFADPEIHEIMEKEKQRQIKGIELIASENFVCRAVMEALGSHLTN 155
Query: 181 KYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCTSANFAVYTGL 360
KYSEG+PG+RYY GNQ IDQIE +CC+RAL AF LDSDKWGVNVQPYSCTSANFAVYTGL
Sbjct: 156 KYSEGLPGSRYYTGNQLIDQIESICCNRALVAFGLDSDKWGVNVQPYSCTSANFAVYTGL 215
Query: 361 LLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGYIDYDKLEDTA 540
LLP DRIMGLD+ SGGHLSHGY GKKVS +SIFFE+LPYKVNP TGYIDYDK+E+ A
Sbjct: 216 LLPGDRIMGLDSPSGGHLSHGYCVPGGKKVSASSIFFESLPYKVNPQTGYIDYDKMEEKA 275
Query: 541 LVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKACISPFDYCDV 720
+ +RPKILICGGSSYPREWDYARFRQ+ADK GAVLMCDMAHISGLVAAK C SPFDYCDV
Sbjct: 276 MDFRPKILICGGSSYPREWDYARFRQVADKIGAVLMCDMAHISGLVAAKECASPFDYCDV 335
Query: 721 VTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFAVFPSLQGGPH 900
VTSTTHKSLRGPRGGI+F+RKG K RK+G L +HGD YDFEERINFAV PSLQGGPH
Sbjct: 336 VTSTTHKSLRGPRGGIIFFRKGQKSRKQGNLLNHGDSSSHYDFEERINFAVHPSLQGGPH 395
Query: 901 NNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTDNHLVLWDLRN 1080
NNH KQVA+PEY YMQQVKKN VTGGTDNHL+LWDL
Sbjct: 396 NNHIAALAIALKQVASPEYRTYMQQVKKNARTLASALLRRKCRLVTGGTDNHLLLWDLTT 455
Query: 1081 FGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLEADFETIADFL 1251
GL GKNYEKVCE+C+ITLNKSAIFG+NGAI GVRIGTPAMTSRGCLE DFETIADFL
Sbjct: 456 LGLAGKNYEKVCEMCHITLNKSAIFGENGAICLGGVRIGTPAMTSRGCLEGDFETIADFL 515
Query: 1252 LRVAQIACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMPAFD 1404
LR AQIAC +QREHG +QK+FLKGLQ N+D+V+LRNRVE+FAS FAMP FD
Sbjct: 516 LRAAQIACAIQREHGKIQKEFLKGLQNNRDIVELRNRVETFASQFAMPGFD 566
>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
Length = 563
Score = 749 bits (1934), Expect = 0.0
Identities = 362/472 (76%), Positives = 400/472 (84%), Gaps = 3/472 (0%)
Frame = +1
Query: 1 ESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAVMEALGSHLTN 180
++R++AVRAW QPL IADP +HEIMEKEK RQ +GIELIASENFVCRAVMEALGSHLTN
Sbjct: 92 DARKAAVRAWGCQPLSIADPDVHEIMEKEKKRQFRGIELIASENFVCRAVMEALGSHLTN 151
Query: 181 KYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCTSANFAVYTGL 360
KYSEGMPGARYYGGNQ+ID+IE LCC RAL AF LD WGVNVQPYSCTSANFAVYTGL
Sbjct: 152 KYSEGMPGARYYGGNQYIDEIETLCCERALNAFGLDPKCWGVNVQPYSCTSANFAVYTGL 211
Query: 361 LLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGYIDYDKLEDTA 540
LLP DRIMGLDT SGG+ SHGYYT +GKKVSGASIFFE+LPYKVNP TGYIDYDKLE+ A
Sbjct: 212 LLPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYIDYDKLEERA 271
Query: 541 LVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKACISPFDYCDV 720
L +RPKILICGGSSYPREWDYARFR IADKCGAVL+CDMA ISG++AAK C++PFDYCD+
Sbjct: 272 LDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGIIAAKECVNPFDYCDI 331
Query: 721 VTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFAVFPSLQGGPH 900
VTSTTHKSLRGPRGGI+FYRKG KPRKRG L S G E D+YDFEE+INFAVFPS+QGGPH
Sbjct: 332 VTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGHESDQYDFEEKINFAVFPSMQGGPH 391
Query: 901 NNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTDNHLVLWDLRN 1080
NNH KQVA PEY AYMQQVKKN VTGGTDNHL+LWDLR
Sbjct: 392 NNHIAALAIALKQVATPEYKAYMQQVKKNAQALACALLRRKCRLVTGGTDNHLILWDLRP 451
Query: 1081 FGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLEADFETIADFL 1251
GLTGK YEKVCE C+ITLNK AIFGDNG I GVR+GTPAMTSRGCLEA FET+A+FL
Sbjct: 452 LGLTGKFYEKVCETCHITLNKIAIFGDNGTIIPGGVRVGTPAMTSRGCLEAHFETMAEFL 511
Query: 1252 LRVAQIACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMPAFDV 1407
+R AQIA ++QREHG LQK LKGL++N+DVV+LR RVE+FA+ FAMP FD+
Sbjct: 512 IRAAQIASILQREHGKLQKTTLKGLESNRDVVELRARVEAFATQFAMPGFDI 563
>ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
Length = 566
Score = 744 bits (1920), Expect = 0.0
Identities = 359/472 (76%), Positives = 399/472 (84%), Gaps = 3/472 (0%)
Frame = +1
Query: 1 ESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAVMEALGSHLTN 180
++R++AVRAW QPL IADP IHEIMEKEK RQ GIELIASENFVCRAVMEALGSHLTN
Sbjct: 95 DARKAAVRAWGCQPLSIADPDIHEIMEKEKKRQFCGIELIASENFVCRAVMEALGSHLTN 154
Query: 181 KYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCTSANFAVYTGL 360
KYSEGMPG+RYYGGNQ+ID+IE LCC RAL AF LD WGVNVQPYSCTSANF+VYTGL
Sbjct: 155 KYSEGMPGSRYYGGNQYIDEIETLCCERALNAFGLDPKCWGVNVQPYSCTSANFSVYTGL 214
Query: 361 LLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGYIDYDKLEDTA 540
LLP DRIMGLDT SGG+ SHGYYT +GKKVSGASIFFE+LPYKVNP TGYIDYDKLE+ A
Sbjct: 215 LLPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYIDYDKLEERA 274
Query: 541 LVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKACISPFDYCDV 720
L +RPKILICGGSSYPREWDYARFR IADKCGAVL+CDMA ISG++AAK C++PFDYCD+
Sbjct: 275 LDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGIIAAKECVNPFDYCDI 334
Query: 721 VTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFAVFPSLQGGPH 900
VTSTTHKSLRGPRGGI+FYRKG KPR RG L S G E D+YDFEE+INFAVFPS+QGGPH
Sbjct: 335 VTSTTHKSLRGPRGGIIFYRKGTKPRNRGILLSQGHESDQYDFEEKINFAVFPSMQGGPH 394
Query: 901 NNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTDNHLVLWDLRN 1080
NNH KQVA PEY AYMQQVKKN VTGGTDNHL+LWDLR
Sbjct: 395 NNHIAALAIALKQVATPEYKAYMQQVKKNAQALACALLRRKCRLVTGGTDNHLILWDLRP 454
Query: 1081 FGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLEADFETIADFL 1251
GLTGK YEKVCE C+ITLNK AIFGDNG I GVR+GTPAMTSRGCLEADFET+A+FL
Sbjct: 455 LGLTGKFYEKVCETCHITLNKIAIFGDNGTIIPGGVRVGTPAMTSRGCLEADFETMAEFL 514
Query: 1252 LRVAQIACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMPAFDV 1407
+R AQIA ++QREHG LQK LKGL++++D+V+LR RVE+FA+ FAMP FD+
Sbjct: 515 IRAAQIASILQREHGKLQKTTLKGLESHRDIVELRARVEAFATQFAMPGFDI 566
>gb|ABO61379.1| serine hydroxymethyltransferase [Populus tremuloides]
Length = 555
Score = 741 bits (1914), Expect = 0.0
Identities = 364/472 (77%), Positives = 397/472 (84%), Gaps = 3/472 (0%)
Frame = +1
Query: 1 ESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAVMEALGSHLTN 180
ESRR+ VRAW N PL +ADP IHEIMEKEK RQ KGIELIASENFVCRAVMEALGSHLTN
Sbjct: 86 ESRRAMVRAWGNHPLPVADPEIHEIMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTN 145
Query: 181 KYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCTSANFAVYTGL 360
KYSEG+PG+RY GNQ+IDQIEL+C SRAL AF LDSDKWGVNVQPYSCTSANF+V+TGL
Sbjct: 146 KYSEGLPGSRYLYGNQYIDQIELICWSRALAAFGLDSDKWGVNVQPYSCTSANFSVFTGL 205
Query: 361 LLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGYIDYDKLEDTA 540
LLP DRIMGLD+ SGGHLSHGYYT GK VS +SIFFE+LPYKVNP TGYIDYDK+E+ A
Sbjct: 206 LLPGDRIMGLDSPSGGHLSHGYYTPGGKNVSASSIFFESLPYKVNPQTGYIDYDKMEEKA 265
Query: 541 LVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKACISPFDYCDV 720
+ +RPKILICGGSSYPREWDYARFRQ+ADK GAVLMCDMAHISGLVAAK C+SPF+YCD+
Sbjct: 266 MDFRPKILICGGSSYPREWDYARFRQVADKIGAVLMCDMAHISGLVAAKECVSPFEYCDI 325
Query: 721 VTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFAVFPSLQGGPH 900
VTSTTHKSLRGPRGGI+FYRKG K RK+G L SHGD YDFEE+INFAV PS QGGPH
Sbjct: 326 VTSTTHKSLRGPRGGIIFYRKGPKLRKQGMLLSHGDGSSHYDFEEKINFAVHPSTQGGPH 385
Query: 901 NNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTDNHLVLWDLRN 1080
NNH KQVA PEY AYMQQV+KN VTGGTDNHL+LWDL
Sbjct: 386 NNHIAALAIALKQVATPEYKAYMQQVRKNAQALASALLKRKCRLVTGGTDNHLLLWDLTT 445
Query: 1081 FGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLEADFETIADFL 1251
+GLTGK YEKVCE+C+ITLNKSAIFGDNGAI GVRIG PAMTSRGC+EADFETIADFL
Sbjct: 446 WGLTGKCYEKVCEMCHITLNKSAIFGDNGAIYPGGVRIGAPAMTSRGCIEADFETIADFL 505
Query: 1252 LRVAQIACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMPAFDV 1407
L+ AQI VVQREHG +KDFLKGL NKD+V+LRNRVE FAS FAMP FD+
Sbjct: 506 LKAAQITTVVQREHG--KKDFLKGLHNNKDIVELRNRVEIFASQFAMPGFDI 555