BLASTX nr result
ID: Coptis24_contig00000553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000553
(2124 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADL36811.1| NAC domain class transcription factor [Malus x do... 234 e-117
ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-... 235 e-117
emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera] 226 e-114
ref|XP_002315338.1| NAC domain protein, IPR003441 [Populus trich... 209 e-108
ref|XP_004150380.1| PREDICTED: NAC domain-containing protein 78-... 205 e-105
>gb|ADL36811.1| NAC domain class transcription factor [Malus x domestica]
Length = 607
Score = 234 bits (597), Expect(3) = e-117
Identities = 179/480 (37%), Positives = 239/480 (49%), Gaps = 66/480 (13%)
Frame = -2
Query: 1445 KDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNNV-----------VFPKSEFDHD-- 1305
KD +VLCR+F+KSG GPKNGE YGAP++EEEWDD++V V SE H
Sbjct: 149 KDPYVLCRIFQKSGTGPKNGEKYGAPVMEEEWDDDDVTCVPGEEAAADVVALSEEPHVEA 208
Query: 1304 -CTLDGFDEYVQA-QQDLAVATTAPNELLIGNDG---EDGCNYVGNPEGSSEDDQKALIG 1140
C DG YV+A D + T P+E + +Y+ + EDD KA+IG
Sbjct: 209 ICVNDG--AYVEAFDLDQNLDTGIPSESAPPPSNFYYGETSHYIEHSGDFVEDDTKAVIG 266
Query: 1139 TGQNDGILDLPDQKMFNFPE-----------QFQMDQTP-----------NENDYFALED 1026
TG+ + DQ FN+PE ++ Q+P NE D +++D
Sbjct: 267 TGET--LEYHGDQMFFNYPEHNETVGNPVKNEYMTSQSPEDLKFVDLPEHNEADAKSVKD 324
Query: 1025 --FLNPADD------NYSAQDPVDGKLTYFDAPQNPPVTDESFVEVDERKPFDADQSPFE 870
FL P+DD NYS +P Y +A +N P+ D F+E ++ + F+
Sbjct: 325 ECFLEPSDDANPAVVNYSLNEP------YLNATENTPIGDGLFLEANDLSNPVESTAGFD 378
Query: 869 MLDEYINYFDAYDNDVMLSFNASEFGEVGVPNMV-------QPALIGEVHT---GNEHAH 720
MLDEY+ YFDA D D+ + +G +GV N V Q + GE G EH
Sbjct: 379 MLDEYLTYFDAND-DISQYIDFDSYGMMGVENYVPDEAPADQKLVNGETEPQPMGGEHVQ 437
Query: 719 LPFPEP-------SETNVEGASSSEQKPVIAKTAADVQFDKGWDGSIAKQVSRM-LGSIS 564
P P+P + + ASSS K A+ +F+ + K+ S M LGSI
Sbjct: 438 -PEPQPLGGEHLVQPVDTDDASSS-------KKTAEFKFESDGNYPFIKKASHMMLGSIP 489
Query: 563 APTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTLIDNDKIWSLGKSGNADLL 384
AP AFA+E P K A NS A SSSSVHVTA MI I +T DN WS GK G +L+
Sbjct: 490 APPAFASEFPGKEAMRRLNSGAASSSSVHVTAAMIRIRDITSSDNRMDWSFGKDGVVNLV 549
Query: 383 LPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFLWVMLLSMSCKIGSYIYTR 204
++ + N S + P+G +LS K V+ R F F F WV+ LSMS KIGSYIYTR
Sbjct: 550 FSVQLSQDDGN--SGNLVPVGGSLSGKTGCVVMRGWFLFMFFWVLFLSMSLKIGSYIYTR 607
Score = 206 bits (523), Expect(3) = e-117
Identities = 97/120 (80%), Positives = 102/120 (85%)
Frame = -1
Query: 1923 HPTDEELVIYYLKRKIFNKPFRIDAISVIDIYKFEPWDLPDRSRLKSRDLEWYFFSGLDK 1744
HPTDEELV YYLKRK+ K FR D ISVIDIYK EPWDLP +S+LK+RDLEWYFFS LDK
Sbjct: 16 HPTDEELVWYYLKRKVSGKNFRFDPISVIDIYKTEPWDLPGKSKLKTRDLEWYFFSFLDK 75
Query: 1743 KYGNGWRTNRATEQGYWKTTGKDRAVKRGERLVGMKKTLVFHIGRAPTGERTNWVMHEYR 1564
KYGN RTNRATE+GYWKTTGKDR VK R VGMKKTLVFH GRAPTG RTNWVMHEYR
Sbjct: 76 KYGNSSRTNRATEKGYWKTTGKDRPVKHNSRDVGMKKTLVFHSGRAPTGARTNWVMHEYR 135
Score = 33.1 bits (74), Expect(3) = e-117
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 2011 APGFRFHPTDEEL 1973
APGFRFHPTDEEL
Sbjct: 10 APGFRFHPTDEEL 22
>ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera]
gi|296085948|emb|CBI31389.3| unnamed protein product
[Vitis vinifera]
Length = 559
Score = 235 bits (599), Expect(3) = e-117
Identities = 161/430 (37%), Positives = 238/430 (55%), Gaps = 14/430 (3%)
Frame = -2
Query: 1451 VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNN--VVFPKSEFDHDCTLDGF--- 1287
V +DAFVLCR+F+KSG GPKNGE YGAP +EEEWD++ VVF E + + G
Sbjct: 146 VAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEWDEDEDVVVFVPGELAAEEVVAGHEPS 205
Query: 1286 DEYVQAQQDLAVATTAPNELLIGNDGEDGCN-YVGNPEGSSEDDQKALIGTGQNDGILDL 1110
DE V ++ L + N+ L N C+ Y + +E++QK IG +N +L
Sbjct: 206 DEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKYAEDSRVFNENEQKPFIGMEENHCGSEL 265
Query: 1109 P-DQKMFNFPEQFQMDQTPNENDYFALE-DFLNPADDNYSAQDPVDGKLTYFDAPQNPPV 936
P DQK+F+ EQ+++D +++Y+ + + +N + +Y +P Y DA +N
Sbjct: 266 PNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVNSVEVDYLLDEP------YLDASENLAF 319
Query: 935 TDESFVEVDE-RKPFDADQSPFEMLDEYINYFDAYDNDVMLSFNASEFGEVGVPNMVQ-- 765
D F+E D+ P + D S F+ +DEY+ + DA D D + F +G N +
Sbjct: 320 EDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDA-DGDNLQQMAFGSFEMMGSENPLSDL 377
Query: 764 -PALIGEVHTGNEHAHLPFPEPSETNVE-GASSSEQKPVIAKTAADVQFDKGWDGSIAKQ 591
P V+ G E + + SE + GASSS++ P + +D+ + KQ
Sbjct: 378 APLDQEPVNGGAEKLPIGSQQLSEAYGDSGASSSKKNPEATEFESDIPYP------FIKQ 431
Query: 590 VS-RMLGSISAPTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTLIDNDKIWS 414
S ++LG I AP A A++ PTK+ A NSA +SSSSVH+TAGMI I TL N WS
Sbjct: 432 ASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQIRDTTLSGNGVDWS 491
Query: 413 LGKSGNADLLLPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFLWVMLLSMS 234
GKSGN + +L +G+ N S+S EP+ + +S KA VI R+GFY F+WV++LS+S
Sbjct: 492 YGKSGNINFMLSFGLPQGETN--SASLEPIASLMSGKAGPVISRAGFYLIFIWVLILSVS 549
Query: 233 CKIGSYIYTR 204
KIG+ I +R
Sbjct: 550 YKIGTCICSR 559
Score = 203 bits (516), Expect(3) = e-117
Identities = 95/120 (79%), Positives = 102/120 (85%)
Frame = -1
Query: 1923 HPTDEELVIYYLKRKIFNKPFRIDAISVIDIYKFEPWDLPDRSRLKSRDLEWYFFSGLDK 1744
HPTDEELV YYLKRK+ K FR D IS IDIYK EPWDLP +S+LKSRDLEWYFFS LDK
Sbjct: 16 HPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSKLKSRDLEWYFFSVLDK 75
Query: 1743 KYGNGWRTNRATEQGYWKTTGKDRAVKRGERLVGMKKTLVFHIGRAPTGERTNWVMHEYR 1564
KYGNG RTNRAT++GYWKTTGKDR V+ R VGMKKTLV+H GRAP GERTNWVMHEYR
Sbjct: 76 KYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSGRAPRGERTNWVMHEYR 135
Score = 33.1 bits (74), Expect(3) = e-117
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 2011 APGFRFHPTDEEL 1973
APGFRFHPTDEEL
Sbjct: 10 APGFRFHPTDEEL 22
>emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]
Length = 573
Score = 226 bits (575), Expect(3) = e-114
Identities = 155/418 (37%), Positives = 229/418 (54%), Gaps = 14/418 (3%)
Frame = -2
Query: 1451 VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNN--VVFPKSEFDHDCTLDGF--- 1287
V +DAFVLCR+F+KSG GPKNGE YGAP +EEEWD++ VVF E + + G
Sbjct: 146 VAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEWDEDEDVVVFVPGELAAEEVVAGHEPS 205
Query: 1286 DEYVQAQQDLAVATTAPNELLIGNDGEDGCN-YVGNPEGSSEDDQKALIGTGQNDGILDL 1110
DE V ++ L + N+ L N C+ Y + +E++QK IG +N +L
Sbjct: 206 DEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKYAEDSRVFNENEQKPFIGMEENHCGSEL 265
Query: 1109 P-DQKMFNFPEQFQMDQTPNENDYFALE-DFLNPADDNYSAQDPVDGKLTYFDAPQNPPV 936
P DQK+F+ EQ+++D +++Y+ + + +N + +Y +P Y DA +N
Sbjct: 266 PNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVNSVEVDYLLDEP------YLDASENLAF 319
Query: 935 TDESFVEVDE-RKPFDADQSPFEMLDEYINYFDAYDNDVMLSFNASEFGEVGVPNMVQ-- 765
D F+E D+ P + D S F+ +DEY+ + DA D D + F +G N +
Sbjct: 320 EDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDA-DGDNLQQMAFGSFEMMGSENPLSDL 377
Query: 764 -PALIGEVHTGNEHAHLPFPEPSETNVE-GASSSEQKPVIAKTAADVQFDKGWDGSIAKQ 591
P V+ G E + + SE + GASSS++ P + +D+ + KQ
Sbjct: 378 APLDQEPVNGGAEKXPIGSQQLSEAYGDSGASSSKKNPXATEFESDIPYP------FIKQ 431
Query: 590 VS-RMLGSISAPTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTLIDNDKIWS 414
S ++LG I AP A A++ PTK+ A NSA +SSSSVH+TAGMI I TL N WS
Sbjct: 432 ASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQIRDTTLSGNGVDWS 491
Query: 413 LGKSGNADLLLPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFLWVMLLS 240
GKSGN + +L +G+ N S+S EP+ + +S KA VI R+GFY F+WV++LS
Sbjct: 492 YGKSGNINFMLSFGLPQGETN--SASLEPIASLMSGKAGPVISRAGFYLIFIWVLILS 547
Score = 203 bits (516), Expect(3) = e-114
Identities = 95/120 (79%), Positives = 102/120 (85%)
Frame = -1
Query: 1923 HPTDEELVIYYLKRKIFNKPFRIDAISVIDIYKFEPWDLPDRSRLKSRDLEWYFFSGLDK 1744
HPTDEELV YYLKRK+ K FR D IS IDIYK EPWDLP +S+LKSRDLEWYFFS LDK
Sbjct: 16 HPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSKLKSRDLEWYFFSVLDK 75
Query: 1743 KYGNGWRTNRATEQGYWKTTGKDRAVKRGERLVGMKKTLVFHIGRAPTGERTNWVMHEYR 1564
KYGNG RTNRAT++GYWKTTGKDR V+ R VGMKKTLV+H GRAP GERTNWVMHEYR
Sbjct: 76 KYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSGRAPRGERTNWVMHEYR 135
Score = 33.1 bits (74), Expect(3) = e-114
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 2011 APGFRFHPTDEEL 1973
APGFRFHPTDEEL
Sbjct: 10 APGFRFHPTDEEL 22
>ref|XP_002315338.1| NAC domain protein, IPR003441 [Populus trichocarpa]
gi|222864378|gb|EEF01509.1| NAC domain protein, IPR003441
[Populus trichocarpa]
Length = 551
Score = 209 bits (531), Expect(3) = e-108
Identities = 95/120 (79%), Positives = 106/120 (88%)
Frame = -1
Query: 1923 HPTDEELVIYYLKRKIFNKPFRIDAISVIDIYKFEPWDLPDRSRLKSRDLEWYFFSGLDK 1744
HPTDEELV YYLKRK+ NKPFR+DAISV D+YK EPWDLP +S+LKSRDLEWYFFS LDK
Sbjct: 12 HPTDEELVRYYLKRKVTNKPFRLDAISVTDVYKSEPWDLPVKSKLKSRDLEWYFFSMLDK 71
Query: 1743 KYGNGWRTNRATEQGYWKTTGKDRAVKRGERLVGMKKTLVFHIGRAPTGERTNWVMHEYR 1564
KYGNG +TNRATE+GYWKTTGKDR + R+VGMKKTLV+H GRAP GER+NWVMHEYR
Sbjct: 72 KYGNGAKTNRATEKGYWKTTGKDRPINWNSRVVGMKKTLVYHQGRAPRGERSNWVMHEYR 131
Score = 201 bits (511), Expect(3) = e-108
Identities = 153/430 (35%), Positives = 224/430 (52%), Gaps = 17/430 (3%)
Frame = -2
Query: 1451 VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEWDDNNV-VFPKSEF----DHDCTLDGF 1287
+ +DAFVLCR+F+KSG GPKNGE YGAP IEEEW+++ V + P E + +
Sbjct: 142 IAQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWENDEVPLLPSEEMVPAGEAPVGDGSY 201
Query: 1286 DEYVQAQQDLAVATTAPNELLIGN--DGEDGCNYVGNPEGSSEDDQKALIGTGQNDGILD 1113
E + Q+ T+ N L N GE N+V P S++D K +I +N
Sbjct: 202 LELNELDQNFDSGITSENTALPLNFYYGETS-NHVEQPSNFSDNDIKPVIRGAENRNGPA 260
Query: 1112 LPDQKMFNFPEQFQMDQTPNENDYFALEDFLNPADDNYSAQDPVDGKLTYFDAPQNPPVT 933
P + + P Q++MD E++ + + +N + NY + +Y DA + P +
Sbjct: 261 PPADQNLDLPGQYEMDADKKEHNAEPI-NIVNALNANYLFDE------SYLDALGDLPPS 313
Query: 932 DESFVEV-DERKPFD----ADQSPFEMLDEYINYFDAYDNDVMLSFNASE-FG-EVGVPN 774
+ F+E D KP + D S F+M+DEY+N+FDA D + +SF+ S+ FG E V +
Sbjct: 314 EGFFLEANDLSKPVEPETGGDSSGFDMVDEYLNFFDAVDEN--MSFDPSDIFGSETAVSD 371
Query: 773 MVQPALIGEVHTGNEHAHLPFPEPSETN-VEGASSSEQKPVIAKTAADVQFDKGWDGS-- 603
+ P +V E ET+ SSS+QKP K FD G D
Sbjct: 372 QLPPQ--EDVKGQTEELSTASLNLLETHGTIDPSSSKQKPEAMK------FDSGADFKYP 423
Query: 602 IAKQVSRMLGSISAPTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTLIDNDK 423
KQ S LG+I AP A A+E P+K+AA + A SSSS++VTAGMI I M+L N+
Sbjct: 424 FIKQASHRLGNIPAPPALASEFPSKDAALHLHPA--SSSSINVTAGMIRIENMSLGGNEM 481
Query: 422 IWSLGKSGNADLLLPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFLWVMLL 243
WS GK+GN +++L +G+ +S PM + K +V+ R Y F WV++L
Sbjct: 482 EWSFGKNGNVNIILSFGLPQQGG---PASLVPMNSLFPGKTESVVSRGWLYLMFFWVLIL 538
Query: 242 SMSCKIGSYI 213
S+S KIG+ I
Sbjct: 539 SVSYKIGTCI 548
Score = 33.1 bits (74), Expect(3) = e-108
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 2011 APGFRFHPTDEEL 1973
APGFRFHPTDEEL
Sbjct: 6 APGFRFHPTDEEL 18
>ref|XP_004150380.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]
gi|449513036|ref|XP_004164210.1| PREDICTED: NAC
domain-containing protein 78-like [Cucumis sativus]
Length = 555
Score = 205 bits (521), Expect(3) = e-105
Identities = 154/437 (35%), Positives = 221/437 (50%), Gaps = 22/437 (5%)
Frame = -2
Query: 1451 VGKDAFVLCRVFRKSGPGPKNGEHYGAPLIEEEW-DDNNVVFPKSEFDHDCTLDGFDEYV 1275
V +DA+VLCR+F+KSG GPKNGE YGAP IEEEW DD + P E + L D+Y+
Sbjct: 146 VVQDAYVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEELTLPGEEVVANEGLVDVDDYM 205
Query: 1274 QAQQDLAVATTAPNELLIGNDG-------EDGCNYVGNPEGSSEDDQKALIGTGQNDGIL 1116
+ D +A E L G G ++ N+V P G E+D K + G D
Sbjct: 206 HFEVD-DIAQYFDGE-LPGEYGQPPLIYPQETSNHVELPNGLVENDNKPEVCAG--DTFE 261
Query: 1115 DLPDQKMFNFPEQFQMDQTPNENDYFA--------LEDFLNPADDNYSAQDPVDGKLTYF 960
P F PEQ+ ++ +D FA D N D NY +P Y
Sbjct: 262 LQPSLNFFQLPEQYGTGESSERDDRFAESSGNLAESSDNFNQEDINYLLDEP------YP 315
Query: 959 DAPQNPPVTDESFVEV-DERKPFDADQSPFEMLDEYINYFDAYDNDVMLSFNASEFGEVG 783
P + + +E F+E D P ++D S ++L+EY +FDA DN + L+F+ S+ +
Sbjct: 316 SVPDDLALNEELFLEANDLSNPVESDPSALDVLEEYFTFFDADDN-LQLAFDPSDLFDSE 374
Query: 782 VPNMVQPALIGEVHTGNEHAHLPFPEPSETNVEGASSSEQKPVIAKTAADVQFDKGWDGS 603
P Q +V E + + S T V AS+S+Q P +T++D +
Sbjct: 375 EPISSQTTSEEKVSEVAEKEFMAAKQSSVTFVNDASTSKQDPKAIETSSDSK------SP 428
Query: 602 IAKQVSRMLGSISAPTAFAAELPTKNAAFGQNSAARSSSSVHVTAGMIHISGMTL---ID 432
K S MLG+I AP AFA+E P+K+ A NSAA++SSSVHVTAGMIHI +T +
Sbjct: 429 FFKGASYMLGNIPAPPAFASEYPSKDMAIRLNSAAQTSSSVHVTAGMIHIRNLTSNGDLV 488
Query: 431 NDKIWSLGKSGNADLLLPYGMTMSNVNLLSSSFEPMGNTLSSKATAVIFRSGFYFFFL-- 258
ND ++ GK+ + +L+L + V + S K ++ GF FFFL
Sbjct: 489 NDPLY--GKNADVNLILSFAQHQHQVE---------SDHQSEKNGTIVGSRGFLFFFLLF 537
Query: 257 WVMLLSMSCKIGSYIYT 207
WV++LS+S K+GS IY+
Sbjct: 538 WVLILSVSFKVGSCIYS 554
Score = 194 bits (493), Expect(3) = e-105
Identities = 88/120 (73%), Positives = 99/120 (82%)
Frame = -1
Query: 1923 HPTDEELVIYYLKRKIFNKPFRIDAISVIDIYKFEPWDLPDRSRLKSRDLEWYFFSGLDK 1744
HPTDEE+V YYL+RK+ K R D ISV +IYK EPWDLP +S+LK+RDLEWYFFS LDK
Sbjct: 16 HPTDEEIVRYYLRRKVSGKSLRFDPISVTEIYKSEPWDLPGKSKLKTRDLEWYFFSPLDK 75
Query: 1743 KYGNGWRTNRATEQGYWKTTGKDRAVKRGERLVGMKKTLVFHIGRAPTGERTNWVMHEYR 1564
KYGN RTNRATE GYWKTTGKDR V+ R+VGMKKTLV+H GRAP G R+NWVMHEYR
Sbjct: 76 KYGNSSRTNRATEHGYWKTTGKDRPVRHNSRVVGMKKTLVYHSGRAPRGARSNWVMHEYR 135
Score = 32.3 bits (72), Expect(3) = e-105
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -3
Query: 2011 APGFRFHPTDEEL 1973
APGFRFHPTDEE+
Sbjct: 10 APGFRFHPTDEEI 22