BLASTX nr result

ID: Coptis24_contig00000539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000539
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [V...   189   6e-46
ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [V...   188   2e-45
emb|CBI22651.3| unnamed protein product [Vitis vinifera]              188   2e-45
emb|CBI34383.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_004166232.1| PREDICTED: 40S ribosomal protein S10-like [C...   185   1e-44

>ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 180

 Score =  189 bits (481), Expect = 6e-46
 Identities = 90/96 (93%), Positives = 93/96 (96%)
 Frame = +1

Query: 58  MIIPKKNRHEISKYLFQEGVLYAKKDYNLEKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 237
           MIIP+KNR EISKYLFQEGV YAKKDYNL KHPDIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 238 WMHYYWYLTNDGIEFLRTFLNLPSEIVPATLKKSLK 345
           WMHYYWYLTNDGIEFLRT+LNLPSEIVPATLKKS+K
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVK 96


>ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 187

 Score =  188 bits (477), Expect = 2e-45
 Identities = 89/103 (86%), Positives = 96/103 (93%)
 Frame = +1

Query: 37  LSAPPPTMIIPKKNRHEISKYLFQEGVLYAKKDYNLEKHPDIDVPNLQVIKLMQSFKSKE 216
           +++ P   IIP+KNR EISKYLFQEGV YAKKDYNL KHP+IDVPNLQVIKLMQSFKSKE
Sbjct: 1   MASLPQHFIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKE 60

Query: 217 YVRETFAWMHYYWYLTNDGIEFLRTFLNLPSEIVPATLKKSLK 345
           YVRETFAWMHYYWYLTNDGIEFLRT+LNLPSEIVPATLKKS+K
Sbjct: 61  YVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVK 103


>emb|CBI22651.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  188 bits (477), Expect = 2e-45
 Identities = 89/96 (92%), Positives = 93/96 (96%)
 Frame = +1

Query: 58  MIIPKKNRHEISKYLFQEGVLYAKKDYNLEKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 237
           MIIP+KNR EISKYLFQEGV YAKKDYNL KHP+IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 36  MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 95

Query: 238 WMHYYWYLTNDGIEFLRTFLNLPSEIVPATLKKSLK 345
           WMHYYWYLTNDGIEFLRT+LNLPSEIVPATLKKS+K
Sbjct: 96  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVK 131


>emb|CBI34383.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  187 bits (476), Expect = 2e-45
 Identities = 89/95 (93%), Positives = 92/95 (96%)
 Frame = +1

Query: 61  IIPKKNRHEISKYLFQEGVLYAKKDYNLEKHPDIDVPNLQVIKLMQSFKSKEYVRETFAW 240
           IIP+KNR EISKYLFQEGV YAKKDYNL KHPDIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 32  IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAW 91

Query: 241 MHYYWYLTNDGIEFLRTFLNLPSEIVPATLKKSLK 345
           MHYYWYLTNDGIEFLRT+LNLPSEIVPATLKKS+K
Sbjct: 92  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVK 126


>ref|XP_004166232.1| PREDICTED: 40S ribosomal protein S10-like [Cucumis sativus]
          Length = 179

 Score =  185 bits (470), Expect = 1e-44
 Identities = 88/96 (91%), Positives = 91/96 (94%)
 Frame = +1

Query: 58  MIIPKKNRHEISKYLFQEGVLYAKKDYNLEKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 237
           MIIP+KNR EISKYLFQEGV YAKKDYNL KHP+IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 238 WMHYYWYLTNDGIEFLRTFLNLPSEIVPATLKKSLK 345
           WMHYYWYLTNDGIEFLRT+LNLPSEIVPATLKK  K
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAK 96


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