BLASTX nr result
ID: Coptis24_contig00000530
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000530 (606 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250... 204 1e-50 emb|CBI33920.3| unnamed protein product [Vitis vinifera] 204 1e-50 emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera] 204 1e-50 ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu... 197 9e-49 ref|XP_004155748.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 184 1e-44 >ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera] Length = 1105 Score = 204 bits (518), Expect = 1e-50 Identities = 106/131 (80%), Positives = 114/131 (87%), Gaps = 1/131 (0%) Frame = +3 Query: 9 LGDSNRDLAFRKGSLSDVGAMPFPPGVGGGRG-ADVNSNVQSYEVITPDKAIDESNVGNR 185 +GDS RD AF+KGSL +MPFPPGVGGGRG D N NVQSYEVIT DKAIDESNVGNR Sbjct: 979 IGDSTRDSAFKKGSLD---SMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNR 1035 Query: 186 MLRNMGWQEGLGLGKDGSGIVEPVQAQAMDVRAGLGSHPRKVVDPSLEVQAGDSYRTLIQ 365 MLR+MGWQEG GLGKDGSG+VEPVQAQAMD RAGLGSH +K +DP LEVQ GDSYRTLIQ Sbjct: 1036 MLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKK-LDPGLEVQPGDSYRTLIQ 1094 Query: 366 KKALARFREMS 398 KKALARF+EMS Sbjct: 1095 KKALARFQEMS 1105 >emb|CBI33920.3| unnamed protein product [Vitis vinifera] Length = 1029 Score = 204 bits (518), Expect = 1e-50 Identities = 106/131 (80%), Positives = 114/131 (87%), Gaps = 1/131 (0%) Frame = +3 Query: 9 LGDSNRDLAFRKGSLSDVGAMPFPPGVGGGRG-ADVNSNVQSYEVITPDKAIDESNVGNR 185 +GDS RD AF+KGSL +MPFPPGVGGGRG D N NVQSYEVIT DKAIDESNVGNR Sbjct: 903 IGDSTRDSAFKKGSLD---SMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNR 959 Query: 186 MLRNMGWQEGLGLGKDGSGIVEPVQAQAMDVRAGLGSHPRKVVDPSLEVQAGDSYRTLIQ 365 MLR+MGWQEG GLGKDGSG+VEPVQAQAMD RAGLGSH +K +DP LEVQ GDSYRTLIQ Sbjct: 960 MLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKK-LDPGLEVQPGDSYRTLIQ 1018 Query: 366 KKALARFREMS 398 KKALARF+EMS Sbjct: 1019 KKALARFQEMS 1029 >emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera] Length = 1070 Score = 204 bits (518), Expect = 1e-50 Identities = 106/131 (80%), Positives = 114/131 (87%), Gaps = 1/131 (0%) Frame = +3 Query: 9 LGDSNRDLAFRKGSLSDVGAMPFPPGVGGGRG-ADVNSNVQSYEVITPDKAIDESNVGNR 185 +GDS RD AF+KGSL +MPFPPGVGGGRG D N NVQSYEVIT DKAIDESNVGNR Sbjct: 944 IGDSTRDSAFKKGSLD---SMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNR 1000 Query: 186 MLRNMGWQEGLGLGKDGSGIVEPVQAQAMDVRAGLGSHPRKVVDPSLEVQAGDSYRTLIQ 365 MLR+MGWQEG GLGKDGSG+VEPVQAQAMD RAGLGSH +K +DP LEVQ GDSYRTLIQ Sbjct: 1001 MLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKK-LDPGLEVQPGDSYRTLIQ 1059 Query: 366 KKALARFREMS 398 KKALARF+EMS Sbjct: 1060 KKALARFQEMS 1070 >ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis] gi|223527250|gb|EEF29409.1| RNA-binding protein, putative [Ricinus communis] Length = 962 Score = 197 bits (502), Expect = 9e-49 Identities = 103/130 (79%), Positives = 113/130 (86%), Gaps = 1/130 (0%) Frame = +3 Query: 12 GDSNRDLAFRKGSLSDVGAMPFPPGVGGGRGA-DVNSNVQSYEVITPDKAIDESNVGNRM 188 GD NRDL F+KGSL +MPFPPGVGGGRGA D + N QSYEVIT DKAIDESNVGNRM Sbjct: 834 GDLNRDLPFKKGSLD---SMPFPPGVGGGRGAGDASINTQSYEVITADKAIDESNVGNRM 890 Query: 189 LRNMGWQEGLGLGKDGSGIVEPVQAQAMDVRAGLGSHPRKVVDPSLEVQAGDSYRTLIQK 368 LR+MGW EGLGLGKDGSG++EPVQAQA + RAGLGS +K +DPSLEVQAGDSY+TLIQK Sbjct: 891 LRSMGWHEGLGLGKDGSGMIEPVQAQATEKRAGLGSQQKK-LDPSLEVQAGDSYKTLIQK 949 Query: 369 KALARFREMS 398 KALARFREMS Sbjct: 950 KALARFREMS 959 >ref|XP_004155748.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101209801 [Cucumis sativus] Length = 464 Score = 184 bits (466), Expect = 1e-44 Identities = 97/134 (72%), Positives = 113/134 (84%), Gaps = 2/134 (1%) Frame = +3 Query: 3 SNL--GDSNRDLAFRKGSLSDVGAMPFPPGVGGGRGADVNSNVQSYEVITPDKAIDESNV 176 SNL GD NRD++ +KGSL AMPFPPGVGGGR + ++N+ ++EVIT D+AIDE+NV Sbjct: 336 SNLEFGDLNRDISVKKGSLD---AMPFPPGVGGGRVSG-DANLNTFEVITADRAIDENNV 391 Query: 177 GNRMLRNMGWQEGLGLGKDGSGIVEPVQAQAMDVRAGLGSHPRKVVDPSLEVQAGDSYRT 356 GNRMLRNMGW EG GLGKDGSG+ EPVQAQAMD RAGLGS +K +DPSLE+QAGDSY+T Sbjct: 392 GNRMLRNMGWHEGSGLGKDGSGMTEPVQAQAMDSRAGLGSQQKK-MDPSLEIQAGDSYKT 450 Query: 357 LIQKKALARFREMS 398 LI KKALARFREMS Sbjct: 451 LIHKKALARFREMS 464