BLASTX nr result

ID: Coptis24_contig00000527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000527
         (1778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61...   437   e-120
ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus ...   423   e-116
ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|2...   412   e-112
ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-lik...   397   e-108
ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycin...   379   e-102

>ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Vitis vinifera]
          Length = 369

 Score =  437 bits (1123), Expect = e-120
 Identities = 217/370 (58%), Positives = 273/370 (73%), Gaps = 3/370 (0%)
 Frame = +1

Query: 241  MWNSISFDLLARIFSFLPPDSLACAASTCKDWYTCTKSHPTSTLLTGTRGNPPWFLAMTI 420
            MW+++ FDLLA IFSFLP DSLA A+S CK W+TC  ++P +    G R NPPWF+A+ +
Sbjct: 1    MWSNLPFDLLANIFSFLPADSLALASSVCKHWHTCVTAYPATA--AGAR-NPPWFVALPV 57

Query: 421  PKHHGLSCYAYNSDLRRWYSL--EFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 594
             ++ G +CY +N  +  W+ L   FLPH I P+A +G L+L R   S  LQLA+CN FTK
Sbjct: 58   -RNRGHTCYTHNPIIDTWHGLFLGFLPHAIRPVASIGGLVLLRSTTSTTLQLAICNLFTK 116

Query: 595  KCVSLPSLNTLRTTPAVGVV-AMDTDRDASSSSNFRIFVAGGMSVAPRGGGGASYEPTLE 771
            +  SLP LN  RT PAVGVV  +D   D   SS FR++VAGGMS AP   GGA+YEPTLE
Sbjct: 117  RYWSLPMLNIARTNPAVGVVFGLDESPDVRFSS-FRVYVAGGMSEAP--SGGAAYEPTLE 173

Query: 772  MYDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWK 951
            MYDS  ++W  +G MP+EFAVRLTVW+PNESVYS G+LYW+TSARAYS+MG ++ S  W+
Sbjct: 174  MYDSWQDRWDIMGRMPVEFAVRLTVWSPNESVYSGGVLYWMTSARAYSVMGLDIESNSWR 233

Query: 952  EVNVPMADRLEFAALVLRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIELGKKFMG 1131
            E++VPMA+RLEFAALV    R TL+GG     ACIWELG GD W L+E++PIELG + +G
Sbjct: 234  ELSVPMAERLEFAALVRWNGRPTLVGGTCNEGACIWELGEGDTWGLVEKIPIELGMRLLG 293

Query: 1132 CRGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPI 1311
             +GSW STKCVG+D A+ LYR+LGS M+VW EV+   RWEW WVEGCCS+ G+Q+ N PI
Sbjct: 294  VKGSWESTKCVGSDGALCLYRDLGSGMVVWREVE-KGRWEWLWVEGCCSVGGKQVQNIPI 352

Query: 1312 KGVLLHPGLA 1341
            KG+LLHP LA
Sbjct: 353  KGLLLHPNLA 362


>ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223543231|gb|EEF44763.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 367

 Score =  423 bits (1088), Expect = e-116
 Identities = 206/369 (55%), Positives = 262/369 (71%), Gaps = 2/369 (0%)
 Frame = +1

Query: 241  MWNSISFDLLARIFSFLPPDSLACAASTCKDWYTCTKSHPTSTLLTGTRGNPPWFLAMTI 420
            MW+S+ FDLLA IFSFL PDSLA A S C+ W+TC  ++P S   +    +PPWF+A+  
Sbjct: 1    MWSSLPFDLLANIFSFLSPDSLARARSACRHWHTCVDAYPLSLAPSMLHHHPPWFVALPT 60

Query: 421  PKHHGLSCYAYNSDLRRWY--SLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 594
             ++    CY +N   +RW+  SLEFL  P  PI  +  LIL +   S  L LA+CNPFT+
Sbjct: 61   -RNREPCCYVHNPVTKRWHMLSLEFLSDPFRPITCISGLILLKATKSTILSLAMCNPFTR 119

Query: 595  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSSSNFRIFVAGGMSVAPRGGGGASYEPTLEM 774
            +   LP LN  RT PAVGVV ++      SS +FR++VAGGMS A RGG  A+YEPTLEM
Sbjct: 120  QFRHLPLLNIARTNPAVGVVILN------SSQHFRVYVAGGMSEASRGG--ATYEPTLEM 171

Query: 775  YDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWKE 954
            YDSR N W+  G MP+EFAVRLTVW+PNESVYS G+LYWITSARA+S+M + + S  W+E
Sbjct: 172  YDSRHNTWKIAGSMPVEFAVRLTVWSPNESVYSNGILYWITSARAFSMMAFEIESNKWQE 231

Query: 955  VNVPMADRLEFAALVLRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIELGKKFMGC 1134
            V+VPMADRLEFA LV R  RLTL+G   GGEA +W+L  GD+W L+E+VP+ELG K +  
Sbjct: 232  VSVPMADRLEFATLVQRSGRLTLVGSTGGGEAFVWKLNKGDIWCLIEKVPVELGVKLLRG 291

Query: 1135 RGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPIK 1314
            + SW S KCVG + A+ LYR+LGS MLVW EV+   +WEW WVEGCCSI G+Q+ N  ++
Sbjct: 292  KASWGSIKCVGGEGAICLYRDLGSGMLVWREVREKGKWEWLWVEGCCSINGKQVENISVR 351

Query: 1315 GVLLHPGLA 1341
            G+L+HP LA
Sbjct: 352  GLLIHPNLA 360


>ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|222841582|gb|EEE79129.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  412 bits (1060), Expect = e-112
 Identities = 201/370 (54%), Positives = 261/370 (70%), Gaps = 2/370 (0%)
 Frame = +1

Query: 241  MWNSISFDLLARIFSFLPPDSLACAASTCKDWYTCTKSHPTSTLLTGTRGNPPWFLAMTI 420
            MWN +  +LLA IFSFL PDSLA A + C+ W TC  S+P ST  +  R +  WF+A+  
Sbjct: 1    MWNRLPSELLANIFSFLSPDSLARAKTACRYWRTCANSYPLSTAASMVRHHQAWFVALPT 60

Query: 421  PKHHGLSCYAYNSDLRRWY--SLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 594
             +  GL CY +N ++ +W+  SL+F PHP  PIA +G+LIL R  +S  LQLA+ NPFTK
Sbjct: 61   -RSRGLCCYLHNPNIDKWHVLSLDFQPHPTRPIASIGSLILSRPTDSTTLQLAISNPFTK 119

Query: 595  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSSSNFRIFVAGGMSVAPRGGGGASYEPTLEM 774
            +    P L   RT PAVGVV +   +   S  +FR++VAGGMS APRG   A+YEPT+E+
Sbjct: 120  EFRCFPMLKIARTNPAVGVVILGPAQHGPSL-HFRVYVAGGMSEAPRGA--ATYEPTMEV 176

Query: 775  YDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWKE 954
            YDS  + W+ +G +P+EFAVRLTVWTPNESVYS G+LYW+TSARAYSIMG+   S  W+E
Sbjct: 177  YDSEDDAWRIVGSVPVEFAVRLTVWTPNESVYSKGVLYWMTSARAYSIMGFEFRSNKWQE 236

Query: 955  VNVPMADRLEFAALVLRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIELGKKFMGC 1134
            ++V MAD+LEFA L     RLTL+GG +GG+AC+WEL     W L E++P+EL +K +G 
Sbjct: 237  LSVHMADKLEFATLAQLNGRLTLVGGTSGGDACVWELDERHAWCLKEKMPVELTRKLLGG 296

Query: 1135 RGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPIK 1314
            + SW +TKCV  D A+ LYR+LGS M VW +V    RWEWFWVEGCCSI+G+++ N PIK
Sbjct: 297  KASWATTKCVRGDGAICLYRDLGSGMAVWRKVGERGRWEWFWVEGCCSIKGKRVQNLPIK 356

Query: 1315 GVLLHPGLAP 1344
            GVL+ P LAP
Sbjct: 357  GVLIPPNLAP 366


>ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
            gi|449484183|ref|XP_004156809.1| PREDICTED: protein
            UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
          Length = 372

 Score =  397 bits (1021), Expect = e-108
 Identities = 198/373 (53%), Positives = 263/373 (70%), Gaps = 3/373 (0%)
 Frame = +1

Query: 241  MWNSISFDLLARIFSFLPPDSLACAASTCKDWYTCTKSHPTSTLLTGTRGNPPWFLAMTI 420
            MW+S+ FDLLA IFSFL PDSLA A S CK W+ C  + P +T    ++ +P WF+A+ +
Sbjct: 1    MWSSLPFDLLANIFSFLSPDSLARARSACKQWHECIDTCPLNTEPILSQSHPSWFIALPL 60

Query: 421  PKHHGLSCYAYNSDLRRWY--SLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 594
              H    C+A+N  L  W+  SLEFLP  + PIA VG+L+  R  +S  LQL LCNPFT 
Sbjct: 61   RAHK--LCFAHNPILDNWHKLSLEFLPDLVKPIATVGSLLFLRSTSSVVLQLILCNPFTT 118

Query: 595  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSSSNFRIFVAGGMSVAPRGGGGASYEPTLEM 774
            +   LP  N  RT PAVGVV  +T +D S   +F+++VAGGMSVAP+GG   +YE  LEM
Sbjct: 119  QFRYLPRPNISRTNPAVGVVIQNTRQD-SQIPDFKVYVAGGMSVAPQGG--TTYESKLEM 175

Query: 775  YDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWKE 954
            YDSR + W+ +G +P+EFAVRLTVWT NESVYS G+LYWITSARA+S+MG+++ S   +E
Sbjct: 176  YDSRNDSWEIVGSLPVEFAVRLTVWTHNESVYSNGILYWITSARAFSVMGFDIDSNNCRE 235

Query: 955  VNVPMADRLEFAALVLRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIELGKKFM-G 1131
            + VPMADRLEFAAL  R  RLT++GG  G +AC+WE   GD+W+L+E+VP ELG+K + G
Sbjct: 236  LQVPMADRLEFAALTSRNGRLTIVGGVCGEDACVWECRDGDVWVLVEKVPNELGRKLVGG 295

Query: 1132 CRGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPI 1311
              GSW ++KC   ++ + LY+ LG+ M+VW E K  + WEW W++GC SIRG+ + N PI
Sbjct: 296  SNGSWINSKCAWNNEVMCLYKELGNGMVVWRERKEKNTWEWVWIDGCSSIRGKIVHNLPI 355

Query: 1312 KGVLLHPGLAPLS 1350
            KG+LL P LAP +
Sbjct: 356  KGLLLQPSLAPFA 368


>ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycine max]
          Length = 369

 Score =  379 bits (972), Expect = e-102
 Identities = 190/379 (50%), Positives = 260/379 (68%), Gaps = 5/379 (1%)
 Frame = +1

Query: 235  LDMWNSISFDLLARIFSFLPPDSLACAASTCKDWYTCTKSHPTSTLLTGTRGNPPWFLAM 414
            + +W+++ FD+LA IFSFL PDSLA A S CK+W+TC+K++  +T  T +     WFLA+
Sbjct: 1    MSIWSNLPFDILANIFSFLSPDSLARARSVCKNWHTCSKAYRIATTTTTS-----WFLAL 55

Query: 415  TIPKHHGLSCYAYNSDLRRWYSLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 594
             I ++HG  CYA+N  + +W+ L      I PIAP+G+L+L R+ NS  LQL LCNPFT+
Sbjct: 56   PI-RNHGPHCYAHNPVIDKWHQLSLPIPSIRPIAPIGSLLLSRVTNSTTLQLGLCNPFTR 114

Query: 595  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSS---SNFRIFVAGGMSVAPRGGGGASYEPT 765
            +   LP L+  RT PAVGVV +    + + +    +FR++VAGGMS A +GGG A+YE  
Sbjct: 115  EFRHLPRLHVARTNPAVGVVTISESSNPNHNVRFPSFRVYVAGGMSEAAQGGG-ATYETK 173

Query: 766  LEMYDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGM 945
            +EMYDSR + W+ +G  P+EFAVRLTVWTPNE+V     LYW+TSARAYS+MG++V    
Sbjct: 174  VEMYDSRFDTWRIVGSTPVEFAVRLTVWTPNENVCIGETLYWVTSARAYSVMGFDVGRNT 233

Query: 946  WKEVNVPMADRLEFAALVLRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIELGKKF 1125
            W E+ VPMA++LEFA LV R   L L+GG  GG ACIWEL  GD W L+++VP+ELG + 
Sbjct: 234  WSELGVPMAEKLEFATLVPRNGALGLVGGTCGGTACIWELNEGDKWCLVDKVPLELGLRL 293

Query: 1126 MGCRGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGN--SRWEWFWVEGCCSIRGQQLP 1299
            +G +    S KCVG + A+ LYR+LG  M++  +V G    RWEW WV+GC   +G+Q+ 
Sbjct: 294  LGGK----SVKCVGNEDAICLYRDLGYGMVLCKKVVGEIMGRWEWVWVDGCGYTKGKQVY 349

Query: 1300 NFPIKGVLLHPGLAPLSII 1356
            N PI+G L+HP LA  S+I
Sbjct: 350  NCPIRGALVHPSLASSSLI 368


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