BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000524
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   530   e-148
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              530   e-148
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   511   e-142
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   488   e-135

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  530 bits (1366), Expect = e-148
 Identities = 261/370 (70%), Positives = 302/370 (81%)
 Frame = -1

Query: 1297 MVGEGLRSEDLEFCFQQLVVFXXXXXXXXXXXXGVMTDWKDLPMELLLRIVSLVDDRTVI 1118
            MVG+G   E+LEFCF++LV+             GV+T+WKD+PMELLLRIV+LVDDRTVI
Sbjct: 3    MVGQG--GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVI 60

Query: 1117 TASGVCTGWRDAVCLGLTHLCXXXXXXXXXXXXXXLAPKFTKLQVLSLRQVKAQLQDDAI 938
             ASGVC+GWRDA+CLGLTHL               LAPKFTKLQ L+LRQ K QL+D A+
Sbjct: 61   MASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAV 120

Query: 937  EAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCR 758
            E +AN+CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF DAALA+LTSFCR
Sbjct: 121  EIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCR 180

Query: 757  KLKILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDL 578
            +LKILNLCGC  AA++RAL+AI  NCS L++LNLGWCE VSD GV SLA+GCP+L ALDL
Sbjct: 181  RLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDL 240

Query: 577  CGCVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRY 398
            CGCV ITD+SV+ALA RC+HLRSLGLY+C+NITDKAMYSLA SRVK+K ++WES+K    
Sbjct: 241  CGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS 300

Query: 397  EEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAHR 218
            EEGL+ LNISQCT+LTP AVQAVCDSFP LHTCPGRHSLIISGCL LTSVHCAC  QAHR
Sbjct: 301  EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 360

Query: 217  AINPLAHSAH 188
              + L+H AH
Sbjct: 361  TASQLSHPAH 370


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  530 bits (1366), Expect = e-148
 Identities = 261/370 (70%), Positives = 302/370 (81%)
 Frame = -1

Query: 1297 MVGEGLRSEDLEFCFQQLVVFXXXXXXXXXXXXGVMTDWKDLPMELLLRIVSLVDDRTVI 1118
            MVG+G   E+LEFCF++LV+             GV+T+WKD+PMELLLRIV+LVDDRTVI
Sbjct: 61   MVGQG--GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVI 118

Query: 1117 TASGVCTGWRDAVCLGLTHLCXXXXXXXXXXXXXXLAPKFTKLQVLSLRQVKAQLQDDAI 938
             ASGVC+GWRDA+CLGLTHL               LAPKFTKLQ L+LRQ K QL+D A+
Sbjct: 119  MASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAV 178

Query: 937  EAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCR 758
            E +AN+CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF DAALA+LTSFCR
Sbjct: 179  EIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCR 238

Query: 757  KLKILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDL 578
            +LKILNLCGC  AA++RAL+AI  NCS L++LNLGWCE VSD GV SLA+GCP+L ALDL
Sbjct: 239  RLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDL 298

Query: 577  CGCVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRY 398
            CGCV ITD+SV+ALA RC+HLRSLGLY+C+NITDKAMYSLA SRVK+K ++WES+K    
Sbjct: 299  CGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS 358

Query: 397  EEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAHR 218
            EEGL+ LNISQCT+LTP AVQAVCDSFP LHTCPGRHSLIISGCL LTSVHCAC  QAHR
Sbjct: 359  EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 418

Query: 217  AINPLAHSAH 188
              + L+H AH
Sbjct: 419  TASQLSHPAH 428


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 373

 Score =  511 bits (1317), Expect = e-142
 Identities = 254/373 (68%), Positives = 293/373 (78%), Gaps = 3/373 (0%)
 Frame = -1

Query: 1297 MVGEG-LRSEDLEFCFQQLVVFXXXXXXXXXXXXG--VMTDWKDLPMELLLRIVSLVDDR 1127
            MVG G LRSEDL  CF++L++                V+T+WKD+PMELLLRIVSLVDDR
Sbjct: 1    MVGGGKLRSEDLNRCFEKLMMAGAAGNTEGRVKMEGVVITEWKDIPMELLLRIVSLVDDR 60

Query: 1126 TVITASGVCTGWRDAVCLGLTHLCXXXXXXXXXXXXXXLAPKFTKLQVLSLRQVKAQLQD 947
            T+I ASGVC+GWRDA+CLGLTHLC              LAPKFTKL+ L LRQ K QL+D
Sbjct: 61   TIIMASGVCSGWRDAICLGLTHLCLSWCKNHMNNLVLWLAPKFTKLETLVLRQDKPQLED 120

Query: 946  DAIEAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTS 767
            +A+EA+A +CHDL+DLDLS S KLTD SLY+LAHGCP+LTKLNISGCT+F D  L YLT 
Sbjct: 121  NAVEAIARYCHDLEDLDLSKSFKLTDCSLYALAHGCPNLTKLNISGCTSFSDGGLEYLTG 180

Query: 766  FCRKLKILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEA 587
            FCRKLKILNLCGCV AATDRAL+AI  NCS L++LNLGWCE V DVGV SLA+GCP+L  
Sbjct: 181  FCRKLKILNLCGCVKAATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMSLAYGCPDLRT 240

Query: 586  LDLCGCVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKK 407
            LDLCGCV ITDDSV+ALA RC+HLRSLGLYYC+NITD+AMYSL +SRVK+K  +WESVK 
Sbjct: 241  LDLCGCVNITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHSRVKNKPAMWESVKG 300

Query: 406  SRYEEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQ 227
               EEGL  LNISQCT+LTP AVQA+CD FP LHTC GRHSL++SGCL+LTSVHCAC  Q
Sbjct: 301  RCDEEGLRSLNISQCTALTPPAVQALCDCFPALHTCSGRHSLVMSGCLNLTSVHCACAVQ 360

Query: 226  AHRAINPLAHSAH 188
            AHR    + + AH
Sbjct: 361  AHRTFRFIPNPAH 373


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  510 bits (1313), Expect = e-142
 Identities = 249/371 (67%), Positives = 289/371 (77%), Gaps = 1/371 (0%)
 Frame = -1

Query: 1297 MVGEG-LRSEDLEFCFQQLVVFXXXXXXXXXXXXGVMTDWKDLPMELLLRIVSLVDDRTV 1121
            M GEG  RSEDL  CF++L++              V+T+WKD+P+ELLLRIVSLVDDRTV
Sbjct: 1    MAGEGKARSEDLNLCFEKLMMLAFGGA--------VITEWKDIPVELLLRIVSLVDDRTV 52

Query: 1120 ITASGVCTGWRDAVCLGLTHLCXXXXXXXXXXXXXXLAPKFTKLQVLSLRQVKAQLQDDA 941
            I ASGVC+GWRDA+C+GLTHLC              LAPKFTKLQ L LRQ K QL+D A
Sbjct: 53   IMASGVCSGWRDAICMGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHA 112

Query: 940  IEAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFC 761
            +E +A++CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF D  L YLT FC
Sbjct: 113  VETIASYCHDLQDLDLSKSFKLSDLSLYALAHGCPNLTKLNISGCTAFSDDGLEYLTEFC 172

Query: 760  RKLKILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALD 581
            +KLK LNLCGCV  ATDRAL+ I  NCS L+TLNLGWCE V DVGV SLA+GCP+L  LD
Sbjct: 173  QKLKFLNLCGCVKGATDRALQGIGRNCSQLQTLNLGWCENVGDVGVMSLAYGCPDLRTLD 232

Query: 580  LCGCVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSR 401
            LCGCV ITDDSV+ALA RC HLRSLGLYYC+NITD+AMYSL ++RVK+K  +WES+K   
Sbjct: 233  LCGCVCITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSLVHNRVKNKLSMWESMKGRC 292

Query: 400  YEEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAH 221
             EEGL +LNISQCT+LTP AVQA+CDSFP LHTC GRHSL++SGCL+LTSVHC C  QAH
Sbjct: 293  DEEGLSRLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTSVHCVCAVQAH 352

Query: 220  RAINPLAHSAH 188
            R+ +   H AH
Sbjct: 353  RSASSFPHPAH 363


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  488 bits (1256), Expect = e-135
 Identities = 234/336 (69%), Positives = 273/336 (81%)
 Frame = -1

Query: 1195 VMTDWKDLPMELLLRIVSLVDDRTVITASGVCTGWRDAVCLGLTHLCXXXXXXXXXXXXX 1016
            V+T+WKD+PM+LLLRIVSLVDDRT+I ASGVC+GWRDA+C GLTHLC             
Sbjct: 23   VITEWKDIPMKLLLRIVSLVDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNNMNNLVL 82

Query: 1015 XLAPKFTKLQVLSLRQVKAQLQDDAIEAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCP 836
             LAPKFTKLQ L LRQ K QL+D+A+E +A++CHDLQDLDLS S KL+D SLY+LAHG P
Sbjct: 83   SLAPKFTKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLDLSKSFKLSDLSLYALAHGFP 142

Query: 835  HLTKLNISGCTAFGDAALAYLTSFCRKLKILNLCGCVPAATDRALKAIAYNCSLLETLNL 656
            +LTKLNISGCTAF D +L YLT FCRKLKILNLCGCV  ATDRAL+AI  NCS L++LNL
Sbjct: 143  NLTKLNISGCTAFSDVSLEYLTEFCRKLKILNLCGCVNGATDRALQAIGRNCSQLQSLNL 202

Query: 655  GWCEAVSDVGVTSLAFGCPNLEALDLCGCVLITDDSVVALATRCMHLRSLGLYYCKNITD 476
            GWCE VSDVGV SLA+GCP++  LDLCGCV ITDDSV+ALA RC HLRSL LYYC+NITD
Sbjct: 203  GWCENVSDVGVMSLAYGCPDIRTLDLCGCVCITDDSVIALANRCPHLRSLCLYYCRNITD 262

Query: 475  KAMYSLANSRVKSKRDLWESVKKSRYEEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCP 296
            +AMYSL ++RVK+K  +WES+K    EEGL  LNISQCT++TP AVQA+CDSFP LHTC 
Sbjct: 263  RAMYSLVHNRVKNKPAMWESMKGRYDEEGLKSLNISQCTAITPPAVQALCDSFPALHTCS 322

Query: 295  GRHSLIISGCLHLTSVHCACTFQAHRAINPLAHSAH 188
            GRHSL++SGC +LTSVHCAC  QAH   + + H AH
Sbjct: 323  GRHSLVMSGCWNLTSVHCACAVQAHHTASSIPHPAH 358