BLASTX nr result

ID: Coptis24_contig00000518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000518
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270757.1| PREDICTED: protein EIN4 [Vitis vinifera]           54   6e-10
emb|CAN66907.1| hypothetical protein VITISV_028812 [Vitis vinifera]    54   6e-10
emb|CBI35168.3| unnamed protein product [Vitis vinifera]               54   6e-10
ref|XP_002284507.1| PREDICTED: ethylene receptor 2-like [Vitis v...    53   1e-09
emb|CAN84042.1| hypothetical protein VITISV_033713 [Vitis vinifera]    53   1e-09

>ref|XP_002270757.1| PREDICTED: protein EIN4 [Vitis vinifera]
          Length = 760

 Score = 54.3 bits (129), Expect(2) = 6e-10
 Identities = 28/60 (46%), Positives = 37/60 (61%)
 Frame = -1

Query: 854 KR*ITYLRGNI*VVLNSQGLMQNETLILQFQLQSSVGASFIEPGGSSEDPRTNYFLRGQR 675
           K+ +  ++GNI +  N QGL Q+ TL+L+FQLQ S G S    G SSE P +N   RG R
Sbjct: 576 KKLVQMMQGNIWISSNPQGLAQSMTLVLKFQLQPSFGRSIFGLGNSSEQPNSNSMFRGLR 635



 Score = 37.0 bits (84), Expect(2) = 6e-10
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = -2

Query: 694 IFLEDNDSLNMLVTRKLLEKLGCHVSLLN 608
           + L D+D++N  VT+KLLE+LGC VS ++
Sbjct: 636 VILADDDNVNRTVTKKLLERLGCQVSAVS 664


>emb|CAN66907.1| hypothetical protein VITISV_028812 [Vitis vinifera]
          Length = 748

 Score = 54.3 bits (129), Expect(2) = 6e-10
 Identities = 28/60 (46%), Positives = 37/60 (61%)
 Frame = -1

Query: 854 KR*ITYLRGNI*VVLNSQGLMQNETLILQFQLQSSVGASFIEPGGSSEDPRTNYFLRGQR 675
           K+ +  ++GNI +  N QGL Q+ TL+L+FQLQ S G S    G SSE P +N   RG R
Sbjct: 564 KKLVQMMQGNIWISSNPQGLAQSMTLVLKFQLQPSFGRSIFGLGNSSEQPNSNSMFRGLR 623



 Score = 37.0 bits (84), Expect(2) = 6e-10
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = -2

Query: 694 IFLEDNDSLNMLVTRKLLEKLGCHVSLLN 608
           + L D+D++N  VT+KLLE+LGC VS ++
Sbjct: 624 VILADDDNVNRTVTKKLLERLGCQVSAVS 652


>emb|CBI35168.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 54.3 bits (129), Expect(2) = 6e-10
 Identities = 28/60 (46%), Positives = 37/60 (61%)
 Frame = -1

Query: 854 KR*ITYLRGNI*VVLNSQGLMQNETLILQFQLQSSVGASFIEPGGSSEDPRTNYFLRGQR 675
           K+ +  ++GNI +  N QGL Q+ TL+L+FQLQ S G S    G SSE P +N   RG R
Sbjct: 484 KKLVQMMQGNIWISSNPQGLAQSMTLVLKFQLQPSFGRSIFGLGNSSEQPNSNSMFRGLR 543



 Score = 37.0 bits (84), Expect(2) = 6e-10
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = -2

Query: 694 IFLEDNDSLNMLVTRKLLEKLGCHVSLLN 608
           + L D+D++N  VT+KLLE+LGC VS ++
Sbjct: 544 VILADDDNVNRTVTKKLLERLGCQVSAVS 572


>ref|XP_002284507.1| PREDICTED: ethylene receptor 2-like [Vitis vinifera]
          Length = 764

 Score = 52.8 bits (125), Expect(2) = 1e-09
 Identities = 25/52 (48%), Positives = 35/52 (67%)
 Frame = -1

Query: 836 LRGNI*VVLNSQGLMQNETLILQFQLQSSVGASFIEPGGSSEDPRTNYFLRG 681
           ++GNI +V N QG  ++  L+L+FQLQ S+G +  EPG SSE P +N   RG
Sbjct: 586 MQGNIWLVPNPQGFAKSMALVLRFQLQPSIGINISEPGESSEHPHSNSLFRG 637



 Score = 37.7 bits (86), Expect(2) = 1e-09
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -2

Query: 694 IFLEDNDSLNMLVTRKLLEKLGCHVSLLN 608
           + L D+D  N  VTRKLLEKLGC VS+++
Sbjct: 640 VLLADDDDTNRAVTRKLLEKLGCIVSVVS 668


>emb|CAN84042.1| hypothetical protein VITISV_033713 [Vitis vinifera]
          Length = 751

 Score = 52.8 bits (125), Expect(2) = 1e-09
 Identities = 25/52 (48%), Positives = 35/52 (67%)
 Frame = -1

Query: 836 LRGNI*VVLNSQGLMQNETLILQFQLQSSVGASFIEPGGSSEDPRTNYFLRG 681
           ++GNI +V N QG  ++  L+L+FQLQ S+G +  EPG SSE P +N   RG
Sbjct: 573 MQGNIWLVPNPQGFAKSMALVLRFQLQPSIGINISEPGESSEHPHSNSLFRG 624



 Score = 37.7 bits (86), Expect(2) = 1e-09
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -2

Query: 694 IFLEDNDSLNMLVTRKLLEKLGCHVSLLN 608
           + L D+D  N  VTRKLLEKLGC VS+++
Sbjct: 627 VLLADDDDTNRAVTRKLLEKLGCIVSVVS 655


Top