BLASTX nr result

ID: Coptis24_contig00000512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000512
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|2...   223   7e-56
gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]    221   4e-55
emb|CBI26389.3| unnamed protein product [Vitis vinifera]              210   5e-52
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...   207   4e-51
ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|2...   206   7e-51

>ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1|
            predicted protein [Populus trichocarpa]
          Length = 723

 Score =  223 bits (568), Expect = 7e-56
 Identities = 102/148 (68%), Positives = 122/148 (82%)
 Frame = +1

Query: 751  QVIRDEDMAKVKENKANMPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILAL 930
            +VI DE        +A MPLL+YVSREKR +H HHFKAGALN LLRVSG+++NSPYIL L
Sbjct: 231  EVINDEPKNVAAIRQAKMPLLVYVSREKRPSHSHHFKAGALNVLLRVSGIMTNSPYILVL 290

Query: 931  DCDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGFEVMWYG 1110
            DCDMYC+DPT+ARQAMCFH+DP ISPSLAF+QFPQKFHN++KNDIY+  LRK F + W G
Sbjct: 291  DCDMYCNDPTSARQAMCFHLDPKISPSLAFIQFPQKFHNINKNDIYDGQLRKLFVIRWPG 350

Query: 1111 VDGINGPYLSGTGFYMKREAFYRSPTQK 1194
            +DG+ GP LSGTGFYMKREA Y + ++K
Sbjct: 351  IDGLQGPILSGTGFYMKREALYGNLSEK 378


>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score =  221 bits (562), Expect = 4e-55
 Identities = 102/148 (68%), Positives = 122/148 (82%)
 Frame = +1

Query: 751  QVIRDEDMAKVKENKANMPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILAL 930
            +VI D    +    +A MPLL+YVSREKR +H HHFKAGALN LLRVSG+I+NSPYIL L
Sbjct: 231  EVIDDGPENEAGIRQAKMPLLVYVSREKRPSHSHHFKAGALNVLLRVSGIITNSPYILVL 290

Query: 931  DCDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGFEVMWYG 1110
            DCDMYC+DPT+ARQAMCFH+DP ISPSLAF+QFPQKFHN++KNDIY+  LRK F + W G
Sbjct: 291  DCDMYCNDPTSARQAMCFHLDPAISPSLAFIQFPQKFHNINKNDIYDGQLRKIFVIRWPG 350

Query: 1111 VDGINGPYLSGTGFYMKREAFYRSPTQK 1194
            +DG+ GP LSGTGFYMKREA Y + ++K
Sbjct: 351  IDGLQGPVLSGTGFYMKREALYGNLSEK 378


>emb|CBI26389.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  210 bits (535), Expect = 5e-52
 Identities = 99/152 (65%), Positives = 120/152 (78%), Gaps = 10/152 (6%)
 Frame = +1

Query: 757  IRDEDMAKVKENKAN----------MPLLIYVSREKRSTHPHHFKAGALNALLRVSGVIS 906
            IR+E M+   ++ A           MPLL+YVSREKR +HPHHFKAGALN LLRVSG+IS
Sbjct: 272  IRNESMSSPTDHPAGVEVIGADQVEMPLLVYVSREKRPSHPHHFKAGALNVLLRVSGIIS 331

Query: 907  NSPYILALDCDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRK 1086
            NSPYIL LDCDMYC+DPT+A++AMCFH+DP ISP+LAFVQFPQ+FHN+SKNDIY+  LR 
Sbjct: 332  NSPYILILDCDMYCNDPTSAQKAMCFHLDPKISPTLAFVQFPQRFHNISKNDIYDSGLRS 391

Query: 1087 GFEVMWYGVDGINGPYLSGTGFYMKREAFYRS 1182
             F ++W G DG+ GP L+GT FY+KR AFY S
Sbjct: 392  IFSILWEGFDGLQGPVLAGTCFYIKRVAFYGS 423


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 733

 Score =  207 bits (527), Expect = 4e-51
 Identities = 92/133 (69%), Positives = 110/133 (82%)
 Frame = +1

Query: 793  KANMPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILALDCDMYCSDPTTARQ 972
            +A MP+L+YVSREKR +HPHHFKAGALN LLRVS +ISNSPYIL LDCDMYC+DP + RQ
Sbjct: 242  EAEMPILVYVSREKRPSHPHHFKAGALNVLLRVSSMISNSPYILVLDCDMYCNDPASVRQ 301

Query: 973  AMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGFEVMWYGVDGINGPYLSGTGF 1152
            AMC H+DP +SPSLAFVQFPQ+FHN+S NDIY+  +R  F  +W G+DG++GP LSGTGF
Sbjct: 302  AMCCHLDPILSPSLAFVQFPQRFHNISSNDIYDSQMRSAFSTLWEGMDGLDGPVLSGTGF 361

Query: 1153 YMKREAFYRSPTQ 1191
            YMKR A Y +  Q
Sbjct: 362  YMKRVALYGTSIQ 374


>ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1|
            predicted protein [Populus trichocarpa]
          Length = 857

 Score =  206 bits (525), Expect = 7e-51
 Identities = 100/161 (62%), Positives = 122/161 (75%), Gaps = 14/161 (8%)
 Frame = +1

Query: 754  VIRDEDMAKVKENKAN-MPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILAL 930
            VI+D    +  +++AN MPLL+YVSREKR +HPHHFKAGALN LLRVSGVISNSP+IL L
Sbjct: 317  VIQDNSNEEAPKDEANEMPLLVYVSREKRPSHPHHFKAGALNVLLRVSGVISNSPHILVL 376

Query: 931  DCDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGF------ 1092
            DCDMYC+DPT+ARQAMCF  DP+IS SLAFVQFPQ+FHN+SK+DIY+  LR  F      
Sbjct: 377  DCDMYCNDPTSARQAMCFFFDPNISSSLAFVQFPQRFHNISKHDIYDSQLRSTFGVRLVF 436

Query: 1093 -------EVMWYGVDGINGPYLSGTGFYMKREAFYRSPTQK 1194
                   +++W G+DG+ GP LSGTGFY+KR + Y    QK
Sbjct: 437  IDFTLLNQILWQGLDGLKGPVLSGTGFYIKRNSLYGDSMQK 477


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