BLASTX nr result

ID: Coptis24_contig00000509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000509
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523907.1| eukaryotic translation elongation factor, pu...   287   5e-76
dbj|BAB86847.1| elongation factor EF-2 [Pisum sativum]                286   1e-75
ref|XP_002894554.1| hypothetical protein ARALYDRAFT_892631 [Arab...   286   2e-75
ref|NP_849818.1| elongation factor EF-2 [Arabidopsis thaliana] g...   285   2e-75
dbj|BAD94268.1| hypothetical protein [Arabidopsis thaliana]           285   2e-75

>ref|XP_002523907.1| eukaryotic translation elongation factor, putative [Ricinus
           communis] gi|223536837|gb|EEF38476.1| eukaryotic
           translation elongation factor, putative [Ricinus
           communis]
          Length = 843

 Score =  287 bits (735), Expect = 5e-76
 Identities = 143/148 (96%), Positives = 146/148 (98%)
 Frame = -3

Query: 449 VFAGKVSTGTKVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGL 270
           VFAGKVSTG KVRIMGPNYVPG+KKDLY KSVQRTVIWMGKKQE+VEDVPCGNTVALVGL
Sbjct: 398 VFAGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVALVGL 457

Query: 269 DQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 90
           DQFITKNATLTNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM
Sbjct: 458 DQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 517

Query: 89  VVCTIEESGEHIIAGAGELHLEICLKDL 6
           VVCTIEESGEHIIAGAGELHLEICLKDL
Sbjct: 518 VVCTIEESGEHIIAGAGELHLEICLKDL 545


>dbj|BAB86847.1| elongation factor EF-2 [Pisum sativum]
          Length = 493

 Score =  286 bits (732), Expect = 1e-75
 Identities = 142/148 (95%), Positives = 146/148 (98%)
 Frame = -3

Query: 449 VFAGKVSTGTKVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGL 270
           VFAGKVSTG KVRIMGPNYVPG+KKDLY KSVQRTVIWMGK+QE+VEDVPCGNTVALVGL
Sbjct: 331 VFAGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVALVGL 390

Query: 269 DQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 90
           DQFITKNATLTNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM
Sbjct: 391 DQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 450

Query: 89  VVCTIEESGEHIIAGAGELHLEICLKDL 6
           VVCTIEESGEHIIAGAGELHLEICLKDL
Sbjct: 451 VVCTIEESGEHIIAGAGELHLEICLKDL 478


>ref|XP_002894554.1| hypothetical protein ARALYDRAFT_892631 [Arabidopsis lyrata subsp.
           lyrata] gi|297340396|gb|EFH70813.1| hypothetical protein
           ARALYDRAFT_892631 [Arabidopsis lyrata subsp. lyrata]
          Length = 843

 Score =  286 bits (731), Expect = 2e-75
 Identities = 140/148 (94%), Positives = 147/148 (99%)
 Frame = -3

Query: 449 VFAGKVSTGTKVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGL 270
           VFAGKVSTG KVRIMGPNYVPG+KKDLYTKSVQRTVIWMGK+QE+VEDVPCGNTVA+VGL
Sbjct: 398 VFAGKVSTGMKVRIMGPNYVPGEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGL 457

Query: 269 DQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 90
           DQFITKNATLTNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM
Sbjct: 458 DQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 517

Query: 89  VVCTIEESGEHIIAGAGELHLEICLKDL 6
           VVCT+EESGEHI+AGAGELHLEICLKDL
Sbjct: 518 VVCTMEESGEHIVAGAGELHLEICLKDL 545


>ref|NP_849818.1| elongation factor EF-2 [Arabidopsis thaliana]
           gi|13605865|gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13
           [Arabidopsis thaliana] gi|15450763|gb|AAK96653.1|
           elongation factor EF-2 [Arabidopsis thaliana]
           gi|23397045|gb|AAN31808.1| putative elongation factor
           [Arabidopsis thaliana] gi|23397162|gb|AAN31864.1|
           putative elongation factor [Arabidopsis thaliana]
           gi|27363422|gb|AAO11630.1| At1g56070/T6H22_13
           [Arabidopsis thaliana] gi|332195217|gb|AEE33338.1|
           elongation factor EF-2 [Arabidopsis thaliana]
          Length = 843

 Score =  285 bits (730), Expect = 2e-75
 Identities = 139/148 (93%), Positives = 147/148 (99%)
 Frame = -3

Query: 449 VFAGKVSTGTKVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGL 270
           VFAGKVSTG KVRIMGPNY+PG+KKDLYTKSVQRTVIWMGK+QE+VEDVPCGNTVA+VGL
Sbjct: 398 VFAGKVSTGMKVRIMGPNYIPGEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGL 457

Query: 269 DQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 90
           DQFITKNATLTNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM
Sbjct: 458 DQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 517

Query: 89  VVCTIEESGEHIIAGAGELHLEICLKDL 6
           VVCT+EESGEHI+AGAGELHLEICLKDL
Sbjct: 518 VVCTMEESGEHIVAGAGELHLEICLKDL 545


>dbj|BAD94268.1| hypothetical protein [Arabidopsis thaliana]
          Length = 539

 Score =  285 bits (730), Expect = 2e-75
 Identities = 139/148 (93%), Positives = 147/148 (99%)
 Frame = -3

Query: 449 VFAGKVSTGTKVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGL 270
           VFAGKVSTG KVRIMGPNY+PG+KKDLYTKSVQRTVIWMGK+QE+VEDVPCGNTVA+VGL
Sbjct: 94  VFAGKVSTGMKVRIMGPNYIPGEKKDLYTKSVQRTVIWMGKRQETVEDVPCGNTVAMVGL 153

Query: 269 DQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 90
           DQFITKNATLTNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM
Sbjct: 154 DQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPM 213

Query: 89  VVCTIEESGEHIIAGAGELHLEICLKDL 6
           VVCT+EESGEHI+AGAGELHLEICLKDL
Sbjct: 214 VVCTMEESGEHIVAGAGELHLEICLKDL 241


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