BLASTX nr result

ID: Coptis24_contig00000497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000497
         (4899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20950.3| unnamed protein product [Vitis vinifera]              479   e-132
ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger d...   479   e-132
ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|1...   477   e-131
gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus]      473   e-130
ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger d...   467   e-128

>emb|CBI20950.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  479 bits (1232), Expect = e-132
 Identities = 209/265 (78%), Positives = 229/265 (86%), Gaps = 2/265 (0%)
 Frame = -1

Query: 1383 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHD 1210
            D V  TE+  L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I  ++  RHD
Sbjct: 30   DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 89

Query: 1209 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 1030
            +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN      
Sbjct: 90   IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 149

Query: 1029 XXXRENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 850
               RENFFHCYKC CCYSV L+NSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH
Sbjct: 150  IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 209

Query: 849  MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 670
             NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T
Sbjct: 210  QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 269

Query: 669  SEVQFHVVAQKCLSCNSYNTRQTRG 595
            S+V FHV+AQKCL+C SYNTRQTRG
Sbjct: 270  SKVHFHVLAQKCLNCKSYNTRQTRG 294


>ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1 [Vitis vinifera] gi|147785653|emb|CAN68688.1|
            hypothetical protein VITISV_029477 [Vitis vinifera]
          Length = 315

 Score =  479 bits (1232), Expect = e-132
 Identities = 209/265 (78%), Positives = 229/265 (86%), Gaps = 2/265 (0%)
 Frame = -1

Query: 1383 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHD 1210
            D V  TE+  L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I  ++  RHD
Sbjct: 51   DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 110

Query: 1209 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 1030
            +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN      
Sbjct: 111  IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 170

Query: 1029 XXXRENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 850
               RENFFHCYKC CCYSV L+NSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH
Sbjct: 171  IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 230

Query: 849  MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 670
             NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T
Sbjct: 231  QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 290

Query: 669  SEVQFHVVAQKCLSCNSYNTRQTRG 595
            S+V FHV+AQKCL+C SYNTRQTRG
Sbjct: 291  SKVHFHVLAQKCLNCKSYNTRQTRG 315


>ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|118485648|gb|ABK94674.1|
            unknown [Populus trichocarpa] gi|222855556|gb|EEE93103.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  477 bits (1227), Expect = e-131
 Identities = 205/261 (78%), Positives = 229/261 (87%)
 Frame = -1

Query: 1380 DVNTTERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPR 1201
            +V T + L++G M+YGC HYRRRCRIRAPCCNE+FDCRHCHNEAKNNIN ++K RHD+PR
Sbjct: 39   NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 98

Query: 1200 HEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXX 1021
            HEV+QVICSLCGTEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHC+         
Sbjct: 99   HEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCDGCGICRIGG 158

Query: 1020 RENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNC 841
             ENFFHCYKCGCCYS  L+NSHPCVEGAMHHDCPVCFE+LFESR D+TV+PCGHTIH +C
Sbjct: 159  PENFFHCYKCGCCYSNLLKNSHPCVEGAMHHDCPVCFEFLFESRYDVTVLPCGHTIHESC 218

Query: 840  LKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEV 661
            LKEMR H QYACPLCSKSVCDMSKVWEK DMEIAATPMPE Y +K VWILCNDCG +SEV
Sbjct: 219  LKEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYLNKMVWILCNDCGKSSEV 278

Query: 660  QFHVVAQKCLSCNSYNTRQTR 598
            QFHVVAQKC++C SYNTRQTR
Sbjct: 279  QFHVVAQKCMNCKSYNTRQTR 299


>gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus]
          Length = 305

 Score =  473 bits (1217), Expect = e-130
 Identities = 205/255 (80%), Positives = 227/255 (89%)
 Frame = -1

Query: 1365 ERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPRHEVQQ 1186
            ERL++G MQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKN+IN +R+ RHD+PR ++QQ
Sbjct: 51   ERLDEGLMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNSINVDRRKRHDMPRQQLQQ 110

Query: 1185 VICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXRENFF 1006
            VICSLCGTEQEV QVC+NCGVCMGKYFC TCK +DDD S+ QYHCN         RENFF
Sbjct: 111  VICSLCGTEQEVRQVCINCGVCMGKYFCATCKLFDDDVSKQQYHCNGCGICRIGGRENFF 170

Query: 1005 HCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMR 826
            HCY+CGCCYS  L+NSH CVEGAMHHDCPVCFEYLFESR D++V+PCGHTIH++CLKEMR
Sbjct: 171  HCYRCGCCYSTILKNSHACVEGAMHHDCPVCFEYLFESRYDVSVLPCGHTIHVHCLKEMR 230

Query: 825  QHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVV 646
            +HLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPES+ +K V ILCNDCGATS+VQFHVV
Sbjct: 231  EHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESFQNKMVRILCNDCGATSQVQFHVV 290

Query: 645  AQKCLSCNSYNTRQT 601
            AQKC  C SYNTRQT
Sbjct: 291  AQKCQKCKSYNTRQT 305


>ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1-like [Cucumis sativus] gi|449505475|ref|XP_004162482.1|
            PREDICTED: RING finger and CHY zinc finger
            domain-containing protein 1-like [Cucumis sativus]
          Length = 307

 Score =  467 bits (1201), Expect = e-128
 Identities = 199/255 (78%), Positives = 224/255 (87%)
 Frame = -1

Query: 1359 LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPRHEVQQVI 1180
            L + +MQ+GC+HYRRRCRIRAPCCNEIFDCRHCHNE KN+I  ++K RH++PRHEV QVI
Sbjct: 53   LEREYMQHGCAHYRRRCRIRAPCCNEIFDCRHCHNEIKNSICVDQKERHEIPRHEVNQVI 112

Query: 1179 CSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXRENFFHC 1000
            CSLCGTEQEV Q C+NCGVC GKYFC++CK +DDDTS+ QYHCN         RENFFHC
Sbjct: 113  CSLCGTEQEVRQDCINCGVCFGKYFCESCKLFDDDTSKKQYHCNGCGICRIGGRENFFHC 172

Query: 999  YKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMRQH 820
            +KCGCCYS+ L+NSHPCVEGAMHHDCPVCFEYLF+S ND+TVMPCGHTIH NCLKEMR H
Sbjct: 173  HKCGCCYSILLKNSHPCVEGAMHHDCPVCFEYLFDSTNDVTVMPCGHTIHQNCLKEMRDH 232

Query: 819  LQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVVAQ 640
             QYACPLCSKSVCDMSKVWEK+DMEIAATP+PE Y +K VWILCNDCG TS+VQ+HVVAQ
Sbjct: 233  FQYACPLCSKSVCDMSKVWEKIDMEIAATPIPEPYQNKMVWILCNDCGKTSKVQYHVVAQ 292

Query: 639  KCLSCNSYNTRQTRG 595
            KCL+C SYNTRQTRG
Sbjct: 293  KCLNCKSYNTRQTRG 307


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