BLASTX nr result

ID: Coptis24_contig00000495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000495
         (2079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277695.1| PREDICTED: uncharacterized protein LOC100260...   685   0.0  
ref|XP_002306177.1| predicted protein [Populus trichocarpa] gi|2...   674   0.0  
ref|XP_002312970.1| predicted protein [Populus trichocarpa] gi|2...   672   0.0  
ref|NP_179257.1| putative nodulin protein [Arabidopsis thaliana]...   656   0.0  
ref|XP_004147031.1| PREDICTED: uncharacterized protein LOC101216...   655   0.0  

>ref|XP_002277695.1| PREDICTED: uncharacterized protein LOC100260696 [Vitis vinifera]
            gi|297744630|emb|CBI37892.3| unnamed protein product
            [Vitis vinifera]
          Length = 549

 Score =  685 bits (1768), Expect = 0.0
 Identities = 359/546 (65%), Positives = 413/546 (75%), Gaps = 10/546 (1%)
 Frame = +2

Query: 77   LSPTSTTSKWLGFVTAVWVQAISGNNYTFSNYSDALKSLMSLTQLQLNNLSVAKDVGKAF 256
            LSP S++ KWLGFVTAVWVQ+ISGNNYTFSNYSDALKSLM+LTQLQLNNLSVAKDVGKAF
Sbjct: 5    LSPASSSRKWLGFVTAVWVQSISGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF 64

Query: 257  GILAGLASDRLPTPAILLIGSLEGFIGYGVQWLVVSQIISPLPYWQMCIFLCMGGNSTTW 436
            G+L+GLASDRL TP +LLIGS+EG +GYGVQWLVVS+ I PLPYWQMCIFLCMGGNSTTW
Sbjct: 65   GLLSGLASDRLSTPMMLLIGSIEGLVGYGVQWLVVSRKIQPLPYWQMCIFLCMGGNSTTW 124

Query: 437  MNTAILVTCMRNFRKNRGPVSGILKGFVGLSTAIFTDISTAIFANNPAIFLLMLAVVPAL 616
            MNTA+LVTC+RNFR NRGPVSGILKG+VGLSTAIFTD+ TA+FA++PAIFLLMLA++P L
Sbjct: 125  MNTAVLVTCIRNFRTNRGPVSGILKGYVGLSTAIFTDLCTALFADDPAIFLLMLAIIPLL 184

Query: 617  VCLSAIIFLREVPPDTTTPEQEKQESYYFQAFNGVSVIIAVYLLVFDTTGNHGRTXXXXX 796
            VCLSAI+FLREV P ++T   EK+E+ +F  FN V+V++AVYLL FD TG+H R      
Sbjct: 185  VCLSAILFLREV-PSSSTAAGEKEETKFFNLFNIVAVVLAVYLLTFDVTGSHSRILSQAF 243

Query: 797  XXXXXXXXXXPLAVPIHSAFLSRLFSL-----NRDVESEVHEPLLRSQQSP----TESQE 949
                      PL++P++  F+ + F+      + D+E  + E LL     P      S+E
Sbjct: 244  AVVLLFLLACPLSIPLY--FMLQDFNRSGSKPSSDIEGLITETLLSQNSQPEMAAPASEE 301

Query: 950  KTEVGSINVEIKR-RPSIGEDHTILEAVRTLDFWILFVSFLCGVGTGLAVMNNMGQMGLA 1126
            K E     VEIKR RPSIGEDHTI+EA+ T DFWILF SFLCGVGTGLAVMNNMGQMGLA
Sbjct: 302  KVEP---VVEIKRPRPSIGEDHTIIEAISTTDFWILFASFLCGVGTGLAVMNNMGQMGLA 358

Query: 1127 LGYVDVSIFVSLTXXXXXXXXXXXXXXXEYFLEKGATPRPLWNAASQILMAVGYVVMAIA 1306
            LGYVDVSIFVSLT               EYF+ K  TPRP WNAASQILMAVGYVVMA+A
Sbjct: 359  LGYVDVSIFVSLTSIWGFFGRILSGSVSEYFIGKAGTPRPFWNAASQILMAVGYVVMAMA 418

Query: 1307 LPGSLYIGSIVVGICYGVRLAVTVPTASELFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1486
            LPGSLYIGS+VVGICYGVRLAVTVP ASELF                             
Sbjct: 419  LPGSLYIGSVVVGICYGVRLAVTVPIASELFGLKYYGLIYNILILNLPLGSFLFSGLLAG 478

Query: 1487 XXYDAEATQTAGGGNTCIGAHCYRLVFMIMALACIIGFGLDVFLSIRTKSLYSKIHASKK 1666
              YDA AT+TAGGG TCIG HCYRLVF++MAL+CIIGFGLDV L+IRTK++YSKI ASK+
Sbjct: 479  LLYDAHATRTAGGGTTCIGPHCYRLVFVVMALSCIIGFGLDVLLAIRTKNVYSKIRASKR 538

Query: 1667 QSKKSA 1684
              K +A
Sbjct: 539  SKKPAA 544


>ref|XP_002306177.1| predicted protein [Populus trichocarpa] gi|222849141|gb|EEE86688.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  674 bits (1738), Expect = 0.0
 Identities = 345/553 (62%), Positives = 407/553 (73%), Gaps = 20/553 (3%)
 Frame = +2

Query: 92   TTSKWLGFVTAVWVQAISGNNYTFSNYSDALKSLMSLTQLQLNNLSVAKDVGKAFGILAG 271
            + +KWLGFVTAVWVQAISGNNYTFSNYSDALKSLM+LTQL+LNNLSVAKDVGKAFG+LAG
Sbjct: 12   SATKWLGFVTAVWVQAISGNNYTFSNYSDALKSLMNLTQLELNNLSVAKDVGKAFGLLAG 71

Query: 272  LASDRLPTPAILLIGSLEGFIGYGVQWLVVSQIISPLPYWQMCIFLCMGGNSTTWMNTAI 451
            LASDRLPTP ILLIGS+EG IGYG QWLVVS  I PLPYWQMCIFLC+GGNSTTWMNTA+
Sbjct: 72   LASDRLPTPVILLIGSIEGLIGYGTQWLVVSGRIQPLPYWQMCIFLCLGGNSTTWMNTAV 131

Query: 452  LVTCMRNFRKNRGPVSGILKGFVGLSTAIFTDISTAIFANNPAIFLLMLAVVPALVCLSA 631
            LVTC+RNFR+NRGPVSGILKG+VGLSTAIFTD+  A+FA +PA FL+MLAV+P  VCL+A
Sbjct: 132  LVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCAALFAYDPAKFLIMLAVIPFAVCLTA 191

Query: 632  IIFLREVPPDTTTPEQEKQESYYFQAFNGVSVIIAVYLLVFDTTGNHGRTXXXXXXXXXX 811
            I+FLRE PP   T E+EK+ES YF  FN V+VI+AVYL+ +    N              
Sbjct: 192  IVFLRETPP-AATIEEEKEESKYFNIFNAVAVIVAVYLMAYGFIPNPSHAISLAFSVILL 250

Query: 812  XXXXXPLAVPIHSAFLSRLFSLNR-----DVESEVHEPLLRSQQSPTESQEK-------- 952
                 PLA P+H AF+ + ++LNR     DVE ++ EPLL  +++  E QEK        
Sbjct: 251  VLLASPLAAPVH-AFI-KSWTLNRFKNQADVERQIQEPLLIEEKAQEEIQEKPAEESASA 308

Query: 953  -------TEVGSINVEIKRRPSIGEDHTILEAVRTLDFWILFVSFLCGVGTGLAVMNNMG 1111
                    E     VE+KRRP IGEDHTI EA++T+DFW+LFVSFLCGVGTGLAVMNNMG
Sbjct: 309  VVEQPQAVEEEKAAVEVKRRPVIGEDHTIFEAMQTVDFWVLFVSFLCGVGTGLAVMNNMG 368

Query: 1112 QMGLALGYVDVSIFVSLTXXXXXXXXXXXXXXXEYFLEKGATPRPLWNAASQILMAVGYV 1291
            Q+GLALGY DVS+F+S+T               EY+++K   PRPLWNAASQILMAVGY+
Sbjct: 369  QIGLALGYADVSLFISMTSIWGFFGRIVSGSVSEYYIKKAGIPRPLWNAASQILMAVGYI 428

Query: 1292 VMAIALPGSLYIGSIVVGICYGVRLAVTVPTASELFXXXXXXXXXXXXXXXXXXXXXXXX 1471
            +MA+ALPGSLY+GSIVVGICYGVRLAVTVPTASELF                        
Sbjct: 429  LMAVALPGSLYVGSIVVGICYGVRLAVTVPTASELFGLKYFGLIYNILILNLPLGSFLFS 488

Query: 1472 XXXXXXXYDAEATQTAGGGNTCIGAHCYRLVFMIMALACIIGFGLDVFLSIRTKSLYSKI 1651
                   YDAEAT   GGGNTC+GAHCYRLVF+IMA+AC+IGFGLDV L IRTK +Y++I
Sbjct: 489  GLLAGFLYDAEATPAPGGGNTCVGAHCYRLVFIIMAIACVIGFGLDVLLGIRTKKIYNRI 548

Query: 1652 HASKKQSKKSAVN 1690
            + S++  K +A +
Sbjct: 549  YMSRRSKKLAAAS 561


>ref|XP_002312970.1| predicted protein [Populus trichocarpa] gi|222849378|gb|EEE86925.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  672 bits (1733), Expect = 0.0
 Identities = 350/564 (62%), Positives = 415/564 (73%), Gaps = 23/564 (4%)
 Frame = +2

Query: 68   VGVLSPTSTT---SKWLGFVTAVWVQAISGNNYTFSNYSDALKSLMSLTQLQLNNLSVAK 238
            +G L  +ST+   +KWLGFVTAVWVQAISGNNYTFSNYSDALK+LMSLTQL+LNNLSVAK
Sbjct: 1    MGYLQTSSTSFKATKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMSLTQLELNNLSVAK 60

Query: 239  DVGKAFGILAGLASDRLPTPAILLIGSLEGFIGYGVQWLVVSQIISPLPYWQMCIFLCMG 418
            DVGKAFG+LAGLASDRLPTP ILLIGS+EG IGYG QWLVVS+ I PL YWQMCIFLC+G
Sbjct: 61   DVGKAFGLLAGLASDRLPTPVILLIGSIEGLIGYGTQWLVVSRRIQPLSYWQMCIFLCLG 120

Query: 419  GNSTTWMNTAILVTCMRNFRKNRGPVSGILKGFVGLSTAIFTDISTAIFANNPAIFLLML 598
            GNSTTWMNTA+LVTC+RNFR+NRGPVSGILKG+VGLSTAIFTD+  A+FA++PA FL+ML
Sbjct: 121  GNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCAALFADDPAKFLIML 180

Query: 599  AVVPALVCLSAIIFLREVPPDTTTPEQEKQESYYFQAFNGVSVIIAVYLLVFDTTGNHGR 778
            AV+P  VCL+AI+FLRE PP   T E+EK+ES YF  FN V+VI+AVYLL +    N   
Sbjct: 181  AVIPFAVCLTAIVFLRETPP-AATIEEEKEESKYFNLFNVVAVIVAVYLLAYSFIPNPSH 239

Query: 779  TXXXXXXXXXXXXXXXPLAVPIHSAFLSRLFSLNR-----DVESEVHEPLLRSQQSPTES 943
                            PLAVP H AF++  ++LNR     DVE ++ EPLLR  ++  + 
Sbjct: 240  VLSSVFSLILLVLLASPLAVPAH-AFINS-WNLNRFKNQEDVERQIQEPLLREDKTQEKI 297

Query: 944  QEK--TEVGSINVE-------------IKRRPSIGEDHTILEAVRTLDFWILFVSFLCGV 1078
            QEK   E     VE             +KRRP IGEDHT+ EA+ T+DFWILF+SFLCGV
Sbjct: 298  QEKPAEEAAKAVVERTRAVEEEKAVEVVKRRPVIGEDHTVFEAMSTVDFWILFLSFLCGV 357

Query: 1079 GTGLAVMNNMGQMGLALGYVDVSIFVSLTXXXXXXXXXXXXXXXEYFLEKGATPRPLWNA 1258
            GTGLAVMNNMGQ+GLALGY DVS+FVS+T               EY+++K  TPRPLWNA
Sbjct: 358  GTGLAVMNNMGQIGLALGYADVSLFVSMTSIWGFFGRIISGTVSEYYIKKAGTPRPLWNA 417

Query: 1259 ASQILMAVGYVVMAIALPGSLYIGSIVVGICYGVRLAVTVPTASELFXXXXXXXXXXXXX 1438
            ASQILMAVGY++MA+ALPGSLYIGSIVVG+CYGVRLAV+VPTASELF             
Sbjct: 418  ASQILMAVGYILMAVALPGSLYIGSIVVGVCYGVRLAVSVPTASELFGLKYFGLIYNILI 477

Query: 1439 XXXXXXXXXXXXXXXXXXYDAEATQTAGGGNTCIGAHCYRLVFMIMALACIIGFGLDVFL 1618
                              YDA+AT T GGGNTC+GAHCYRLVF+IMA+AC+IGFGLDV L
Sbjct: 478  LNLPLGSFLFSGLLAGLLYDAQATPTPGGGNTCVGAHCYRLVFIIMAVACVIGFGLDVLL 537

Query: 1619 SIRTKSLYSKIHASKKQSKKSAVN 1690
             IRTK +Y+KI+ S++  K ++ +
Sbjct: 538  GIRTKKIYTKIYMSRRSKKLASAS 561


>ref|NP_179257.1| putative nodulin protein [Arabidopsis thaliana]
            gi|4581109|gb|AAD24599.1| nodulin-like protein
            [Arabidopsis thaliana] gi|17979283|gb|AAL49867.1|
            putative nodulin protein [Arabidopsis thaliana]
            gi|20465250|gb|AAM19945.1| At2g16660/T24I21.7
            [Arabidopsis thaliana] gi|23463081|gb|AAN33210.1|
            At2g16660/T24I21.7 [Arabidopsis thaliana]
            gi|330251429|gb|AEC06523.1| putative nodulin protein
            [Arabidopsis thaliana]
          Length = 546

 Score =  656 bits (1693), Expect = 0.0
 Identities = 334/536 (62%), Positives = 400/536 (74%), Gaps = 4/536 (0%)
 Frame = +2

Query: 86   TSTTSKWLGFVTAVWVQAISGNNYTFSNYSDALKSLMSLTQLQLNNLSVAKDVGKAFGIL 265
            +S+  KWLGFVTAVWVQ+ISGNNYTFSNYS ALKSLM+L QL+LNNLSVAKDVGKAFGIL
Sbjct: 9    SSSALKWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLNQLELNNLSVAKDVGKAFGIL 68

Query: 266  AGLASDRLPTPAILLIGSLEGFIGYGVQWLVVSQIISPLPYWQMCIFLCMGGNSTTWMNT 445
            AGLASDRLPTP ILLIG  EG +GYGVQWLVVS+ I P+PYWQMCIFLCMGGNSTTWMNT
Sbjct: 69   AGLASDRLPTPVILLIGCFEGLLGYGVQWLVVSRTIQPIPYWQMCIFLCMGGNSTTWMNT 128

Query: 446  AILVTCMRNFRKNRGPVSGILKGFVGLSTAIFTDISTAIFANNPAIFLLMLAVVPALVCL 625
            A+LVTC+RNFR+NRGPVSGILKG+VGLSTAIFTD+ TA+F+N+PA FL++LAVVP  VCL
Sbjct: 129  AVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCTALFSNDPASFLVLLAVVPFAVCL 188

Query: 626  SAIIFLREVPPDTTTPEQEKQESYYFQAFNGVSVIIAVYLLVFDTTGNHGRTXXXXXXXX 805
            +A+ FLRE+PP ++  E E +E+ YF  FN V+V++AVYL  +D  G             
Sbjct: 189  TAVFFLREIPPASSAAE-ENEETRYFTIFNIVAVVVAVYLQSYDIIGIKTGVFSVAFASI 247

Query: 806  XXXXXXXPLAVPIHSAFLSRLFSLNRDVESEVHEPLLRSQQSPTESQEKTEVGSINVE-- 979
                   P+A+P HS   S  +    D+E  + EPLLRS+ +  E +E   V ++  E  
Sbjct: 248  LLFLLASPIAIPFHSFIKSLNYGEQDDLEGRIQEPLLRSEIAAAE-KEVIVVAAVAAEEE 306

Query: 980  --IKRRPSIGEDHTILEAVRTLDFWILFVSFLCGVGTGLAVMNNMGQMGLALGYVDVSIF 1153
               +++P +GEDHTI+EAV T+DFW+LFVSFLCGVGTGLAVMNNMGQ+GLALGY +VSIF
Sbjct: 307  EKKRKKPVLGEDHTIMEAVLTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYTNVSIF 366

Query: 1154 VSLTXXXXXXXXXXXXXXXEYFLEKGATPRPLWNAASQILMAVGYVVMAIALPGSLYIGS 1333
            VS+T               EYFL+K  TPRPLWNAASQILMAVGY++MA+A+P SLYIGS
Sbjct: 367  VSMTSIWGFFGRILSGTLSEYFLKKAGTPRPLWNAASQILMAVGYILMALAVPNSLYIGS 426

Query: 1334 IVVGICYGVRLAVTVPTASELFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDAEATQ 1513
            +VVG+CYGVRLA+TVPTASELF                               YDAEAT 
Sbjct: 427  MVVGVCYGVRLAITVPTASELFGLKYYGLIYNILVLNLPLGSFLFSGLLAGFLYDAEATP 486

Query: 1514 TAGGGNTCIGAHCYRLVFMIMALACIIGFGLDVFLSIRTKSLYSKIHASKKQSKKS 1681
            T GGGNTC+GAHCYRL+F++MALA +IG GLD+ L+ RTK +Y+KIHASKK SKKS
Sbjct: 487  TPGGGNTCVGAHCYRLIFIVMALASVIGVGLDLVLAYRTKEIYAKIHASKK-SKKS 541


>ref|XP_004147031.1| PREDICTED: uncharacterized protein LOC101216743 [Cucumis sativus]
          Length = 540

 Score =  655 bits (1690), Expect = 0.0
 Identities = 336/540 (62%), Positives = 397/540 (73%), Gaps = 1/540 (0%)
 Frame = +2

Query: 77   LSPTSTTSKWLGFVTAVWVQAISGNNYTFSNYSDALKSLMSLTQLQLNNLSVAKDVGKAF 256
            L P+ T  KWLGFV+AVWVQAISGNNYTFSNYSDALKSLM+LTQLQLNNLSVAKDVGKAF
Sbjct: 6    LPPSMTVLKWLGFVSAVWVQAISGNNYTFSNYSDALKSLMNLTQLQLNNLSVAKDVGKAF 65

Query: 257  GILAGLASDRLPTPAILLIGSLEGFIGYGVQWLVVSQIISPLPYWQMCIFLCMGGNSTTW 436
            G+LAG+ASD+ PT  ILLIGS+EG +GYG QWLVVS+ ISPLPYWQMCIFLCMGGNSTTW
Sbjct: 66   GLLAGIASDKFPTWVILLIGSVEGLVGYGTQWLVVSRRISPLPYWQMCIFLCMGGNSTTW 125

Query: 437  MNTAILVTCMRNFRKNRGPVSGILKGFVGLSTAIFTDISTAIFANNPAIFLLMLAVVPAL 616
            MNTA+LVTC+RNFRKNRGPVSGILKG+VGLSTAIFTD+  A+F+++P+ FLLML++VP  
Sbjct: 126  MNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCFALFSSDPSSFLLMLSLVPLA 185

Query: 617  VCLSAIIFLREVPPDTT-TPEQEKQESYYFQAFNGVSVIIAVYLLVFDTTGNHGRTXXXX 793
            VCL A+ FLRE+P  TT T    +QES YF  FN ++V++AVYLL FD   N GR     
Sbjct: 186  VCLFAMFFLREIPTQTTITAADTQQESNYFSVFNALAVVVAVYLLCFDFVKNSGRLISQL 245

Query: 794  XXXXXXXXXXXPLAVPIHSAFLSRLFSLNRDVESEVHEPLLRSQQSPTESQEKTEVGSIN 973
                       PL +PI+S F S     +R    ++ EPL++  +       K E G   
Sbjct: 246  YSIGLLILLGSPLIIPIYSFFKSWNSIRSR---LDLEEPLVK--EEVVTGAVKEEAGETA 300

Query: 974  VEIKRRPSIGEDHTILEAVRTLDFWILFVSFLCGVGTGLAVMNNMGQMGLALGYVDVSIF 1153
            V  +R P IGE+HTI EAVRT+DFW+LFVSFLCGVGTGLAVMNNMGQ+GLALGY DVS+F
Sbjct: 301  VIEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMF 360

Query: 1154 VSLTXXXXXXXXXXXXXXXEYFLEKGATPRPLWNAASQILMAVGYVVMAIALPGSLYIGS 1333
            VSLT               E+FL+K  TPRPLWNAASQILM VGYV+MA+A+PGSLYIGS
Sbjct: 361  VSLTSIWGFFGRILSGTISEHFLKKAGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGS 420

Query: 1334 IVVGICYGVRLAVTVPTASELFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDAEATQ 1513
            ++VGICYGVRL+VTVPTASELF                               YD EAT 
Sbjct: 421  VIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATP 480

Query: 1514 TAGGGNTCIGAHCYRLVFMIMALACIIGFGLDVFLSIRTKSLYSKIHASKKQSKKSAVNA 1693
            T GGGNTCIG HCYR+VF++MALAC+IGF LD++L+ RTK LYSK+ A+KK  K ++ N+
Sbjct: 481  TEGGGNTCIGGHCYRIVFLVMALACVIGFVLDIWLAFRTKELYSKLKANKKSKKVNSNNS 540


Top