BLASTX nr result
ID: Coptis24_contig00000489
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000489 (1158 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ... 310 4e-82 ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi... 305 2e-80 ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2... 301 2e-79 ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi... 298 2e-78 ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|2... 296 9e-78 >ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus] gi|449496096|ref|XP_004160038.1| PREDICTED: protein RER1B-like [Cucumis sativus] Length = 194 Score = 310 bits (794), Expect = 4e-82 Identities = 143/181 (79%), Positives = 160/181 (88%) Frame = -3 Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743 G+GGD AS V+P+AKWR+DFSR FQYYLDRSTPH V+RW+GTL+ A IYVLRV++VQGFY Sbjct: 3 GVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFY 62 Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563 VVSY LSPKVDPEL+ LDGA+LPTKGSDEFKPFIRRLPEFKFWYAITK Sbjct: 63 VVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITK 122 Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383 AFC+AFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HM+KYKYIPFS GKQ+YTGK Sbjct: 123 AFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYTGK 182 Query: 382 K 380 + Sbjct: 183 R 183 >ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi|302142515|emb|CBI19718.3| unnamed protein product [Vitis vinifera] Length = 194 Score = 305 bits (780), Expect = 2e-80 Identities = 141/180 (78%), Positives = 158/180 (87%) Frame = -3 Query: 919 IGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFYV 740 + GDAASTV+P+AKW++DFSR FQ+YLD+STPH V RW+GTL A IYVLRVY+VQGFY+ Sbjct: 4 VEGDAASTVAPLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVYYVQGFYI 63 Query: 739 VSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITKA 560 VSY LSPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY+ITKA Sbjct: 64 VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITKA 123 Query: 559 FCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGKK 380 FCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HM+KYKY+PFS GKQ+YTGKK Sbjct: 124 FCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSIGKQRYTGKK 183 >ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1| predicted protein [Populus trichocarpa] Length = 194 Score = 301 bits (772), Expect = 2e-79 Identities = 140/181 (77%), Positives = 155/181 (85%) Frame = -3 Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743 G GGDAA+ V P+AKWR+DFSR FQYYLDRSTPH ++RW+GTL A IYVLRV++ QGFY Sbjct: 3 GNGGDAANVVGPVAKWRNDFSRAFQYYLDRSTPHPMQRWLGTLAVAAIYVLRVFYAQGFY 62 Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563 +VSY LSPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWYAITK Sbjct: 63 IVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITK 122 Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383 AFCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQ++HMMKYKY+PFS GKQ+Y K Sbjct: 123 AFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQLMHMMKYKYVPFSLGKQRYGKK 182 Query: 382 K 380 K Sbjct: 183 K 183 >ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi|223551111|gb|EEF52597.1| rer1 protein, putative [Ricinus communis] Length = 194 Score = 298 bits (763), Expect = 2e-78 Identities = 137/181 (75%), Positives = 156/181 (86%) Frame = -3 Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743 G GGD S V+P AKWR++FSR FQYYLDRSTP+ +ERW+GTL A+ IY+LRVY+ QGFY Sbjct: 3 GAGGDTDSIVAPFAKWRNEFSRTFQYYLDRSTPYPMERWLGTLAASAIYMLRVYYAQGFY 62 Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563 +VSY LSPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY+ITK Sbjct: 63 IVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITK 122 Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383 AFCVAFLMTFFS+FDVPVFWPILLCYW+VLFVLTMKRQI+HM+KYKY+PFS GKQ+Y+GK Sbjct: 123 AFCVAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPFSVGKQRYSGK 182 Query: 382 K 380 K Sbjct: 183 K 183 >ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|222857113|gb|EEE94660.1| predicted protein [Populus trichocarpa] Length = 194 Score = 296 bits (757), Expect = 9e-78 Identities = 138/181 (76%), Positives = 153/181 (84%) Frame = -3 Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743 G GGDAA+ V+P+AKWR+DFSR FQ+YLDRSTPH ERW+GTL A +YVLR YFVQGFY Sbjct: 3 GNGGDAANVVAPLAKWRNDFSRAFQFYLDRSTPHPTERWLGTLAVAAVYVLRAYFVQGFY 62 Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563 ++SY LSPKVDPELE D A+LPTKGSDEFKPFIRRLPEFKFWYAITK Sbjct: 63 IISYGLGIYILNLLIGFLSPKVDPELEVSDDASLPTKGSDEFKPFIRRLPEFKFWYAITK 122 Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383 AFCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HM+KYKY+PFS GKQ+Y K Sbjct: 123 AFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSRGKQRYGRK 182 Query: 382 K 380 K Sbjct: 183 K 183