BLASTX nr result

ID: Coptis24_contig00000489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000489
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ...   310   4e-82
ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi...   305   2e-80
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi...   298   2e-78
ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|2...   296   9e-78

>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
           gi|449496096|ref|XP_004160038.1| PREDICTED: protein
           RER1B-like [Cucumis sativus]
          Length = 194

 Score =  310 bits (794), Expect = 4e-82
 Identities = 143/181 (79%), Positives = 160/181 (88%)
 Frame = -3

Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743
           G+GGD AS V+P+AKWR+DFSR FQYYLDRSTPH V+RW+GTL+ A IYVLRV++VQGFY
Sbjct: 3   GVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFY 62

Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563
           VVSY             LSPKVDPEL+ LDGA+LPTKGSDEFKPFIRRLPEFKFWYAITK
Sbjct: 63  VVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITK 122

Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383
           AFC+AFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HM+KYKYIPFS GKQ+YTGK
Sbjct: 123 AFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYTGK 182

Query: 382 K 380
           +
Sbjct: 183 R 183


>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|302142515|emb|CBI19718.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  305 bits (780), Expect = 2e-80
 Identities = 141/180 (78%), Positives = 158/180 (87%)
 Frame = -3

Query: 919 IGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFYV 740
           + GDAASTV+P+AKW++DFSR FQ+YLD+STPH V RW+GTL  A IYVLRVY+VQGFY+
Sbjct: 4   VEGDAASTVAPLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVYYVQGFYI 63

Query: 739 VSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITKA 560
           VSY             LSPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY+ITKA
Sbjct: 64  VSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITKA 123

Query: 559 FCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGKK 380
           FCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HM+KYKY+PFS GKQ+YTGKK
Sbjct: 124 FCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSIGKQRYTGKK 183


>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  301 bits (772), Expect = 2e-79
 Identities = 140/181 (77%), Positives = 155/181 (85%)
 Frame = -3

Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743
           G GGDAA+ V P+AKWR+DFSR FQYYLDRSTPH ++RW+GTL  A IYVLRV++ QGFY
Sbjct: 3   GNGGDAANVVGPVAKWRNDFSRAFQYYLDRSTPHPMQRWLGTLAVAAIYVLRVFYAQGFY 62

Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563
           +VSY             LSPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWYAITK
Sbjct: 63  IVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITK 122

Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383
           AFCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQ++HMMKYKY+PFS GKQ+Y  K
Sbjct: 123 AFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQLMHMMKYKYVPFSLGKQRYGKK 182

Query: 382 K 380
           K
Sbjct: 183 K 183


>ref|XP_002510410.1| rer1 protein, putative [Ricinus communis]
           gi|223551111|gb|EEF52597.1| rer1 protein, putative
           [Ricinus communis]
          Length = 194

 Score =  298 bits (763), Expect = 2e-78
 Identities = 137/181 (75%), Positives = 156/181 (86%)
 Frame = -3

Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743
           G GGD  S V+P AKWR++FSR FQYYLDRSTP+ +ERW+GTL A+ IY+LRVY+ QGFY
Sbjct: 3   GAGGDTDSIVAPFAKWRNEFSRTFQYYLDRSTPYPMERWLGTLAASAIYMLRVYYAQGFY 62

Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563
           +VSY             LSPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY+ITK
Sbjct: 63  IVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITK 122

Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383
           AFCVAFLMTFFS+FDVPVFWPILLCYW+VLFVLTMKRQI+HM+KYKY+PFS GKQ+Y+GK
Sbjct: 123 AFCVAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPFSVGKQRYSGK 182

Query: 382 K 380
           K
Sbjct: 183 K 183


>ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|222857113|gb|EEE94660.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  296 bits (757), Expect = 9e-78
 Identities = 138/181 (76%), Positives = 153/181 (84%)
 Frame = -3

Query: 922 GIGGDAASTVSPIAKWRDDFSRKFQYYLDRSTPHAVERWIGTLVAAFIYVLRVYFVQGFY 743
           G GGDAA+ V+P+AKWR+DFSR FQ+YLDRSTPH  ERW+GTL  A +YVLR YFVQGFY
Sbjct: 3   GNGGDAANVVAPLAKWRNDFSRAFQFYLDRSTPHPTERWLGTLAVAAVYVLRAYFVQGFY 62

Query: 742 VVSYXXXXXXXXXXXXXLSPKVDPELEALDGANLPTKGSDEFKPFIRRLPEFKFWYAITK 563
           ++SY             LSPKVDPELE  D A+LPTKGSDEFKPFIRRLPEFKFWYAITK
Sbjct: 63  IISYGLGIYILNLLIGFLSPKVDPELEVSDDASLPTKGSDEFKPFIRRLPEFKFWYAITK 122

Query: 562 AFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMMKYKYIPFSFGKQKYTGK 383
           AFCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HM+KYKY+PFS GKQ+Y  K
Sbjct: 123 AFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSRGKQRYGRK 182

Query: 382 K 380
           K
Sbjct: 183 K 183


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