BLASTX nr result
ID: Coptis24_contig00000478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000478 (1096 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein lig... 139 2e-30 ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein lig... 137 4e-30 ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus c... 129 1e-27 ref|XP_003631284.1| PREDICTED: uncharacterized protein At1g27050... 122 1e-25 ref|XP_003517921.1| PREDICTED: uncharacterized protein At1g27050... 121 3e-25 >ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis sativus] Length = 577 Score = 139 bits (349), Expect = 2e-30 Identities = 83/199 (41%), Positives = 118/199 (59%), Gaps = 13/199 (6%) Frame = -2 Query: 984 MGRKRDKPY-FSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLVH-N 811 MGRKRDKPY SH P+S+ P++ P ++ + P + + LV + Sbjct: 1 MGRKRDKPYPSSHLPTSA----PKRRR------PPPSTENDDLEKPVSKPAPPLALVVVD 50 Query: 810 LSNHCSVLNLKRMFEMYGCVSRIRIDSG-VGYVNFRXXXXXXXXXXASVDPGII--VDDV 640 L +HCSVL+LK FE+YG +SRIRID VGY+ +R A++DP +D Sbjct: 51 LPSHCSVLDLKSRFEIYGSISRIRIDRDCVGYITYRTKDSADAAMTAALDPSFAFTIDSK 110 Query: 639 KVNVSWANDSFPQWREGVALSIKER--LSSKLVQPEVPLSRHGRGNKLGSGTVSP----- 481 KV V WAND QWR+G+ + + + LSSKL++ EVPLSRHGR NKL S V+P Sbjct: 111 KVQVLWANDPQVQWRQGINVGVNKNKELSSKLLRAEVPLSRHGRSNKLASAIVNPRRSNS 170 Query: 480 -NKPDISYKGRDIVAYDDL 427 ++ D+ ++GR++VAYDD+ Sbjct: 171 SSRSDVPFRGREVVAYDDI 189 >ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis sativus] Length = 608 Score = 137 bits (346), Expect = 4e-30 Identities = 83/199 (41%), Positives = 117/199 (58%), Gaps = 13/199 (6%) Frame = -2 Query: 984 MGRKRDKPY-FSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLVH-N 811 MGRKRDKPY SH P+S+ P++ P ++ + P + + LV + Sbjct: 1 MGRKRDKPYPSSHLPTSA----PKRRR------PPPSTENDDLEKPVSKPAPPLALVVVD 50 Query: 810 LSNHCSVLNLKRMFEMYGCVSRIRIDSG-VGYVNFRXXXXXXXXXXASVDPGII--VDDV 640 L +HCSVL+LK FE+YG +SRIRID VGY+ +R A++DP +D Sbjct: 51 LPSHCSVLDLKSRFEIYGSISRIRIDRDCVGYITYRTKDSADAAMTAALDPSFAFTIDSK 110 Query: 639 KVNVSWANDSFPQWREGVALSIKER--LSSKLVQPEVPLSRHGRGNKLGSGTVSP----- 481 KV V WAND QW +G+ + + + LSSKL+Q EVPLSRHGR NKL S V+P Sbjct: 111 KVQVLWANDPQVQWGQGINVGVNKNKELSSKLLQAEVPLSRHGRSNKLASAIVNPRRSNS 170 Query: 480 -NKPDISYKGRDIVAYDDL 427 ++ D+ ++GR++VAYDD+ Sbjct: 171 SSRSDVPFRGREVVAYDDI 189 >ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus communis] gi|223540641|gb|EEF42204.1| hypothetical protein RCOM_0698730 [Ricinus communis] Length = 195 Score = 129 bits (325), Expect = 1e-27 Identities = 82/199 (41%), Positives = 107/199 (53%), Gaps = 13/199 (6%) Frame = -2 Query: 984 MGRKRDKPYFSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNP-PQRQTTSMVLVHNL 808 M RKRD PYFS P++ P P E+E P P Q+ V+V L Sbjct: 1 MSRKRDNPYFSR---HDRVPFPKRRRPLPPHPP--PSAEDEIDKPTPTPQSPPAVVVMGL 55 Query: 807 SNHCSVLNLKRMFEMYGCVSRIRIDSGVGYVNFRXXXXXXXXXXASVDP--GIIVDDVKV 634 +CSVL+LK FE+YG +SR RID V + FR A++D GI + +V Sbjct: 56 PPNCSVLDLKSRFEIYGEISRTRIDRDVALITFRTRDSAEAAIAAALDTSFGITIGSKRV 115 Query: 633 NVSWANDSFPQWREGVAL--SIKERLSSKLVQPEVPLSRHGRGNKLGSGTVSPNKP---- 472 V WA D QWREGV + + + SSKL++ E+PLSRHGRGNKL S V+P Sbjct: 116 QVLWATDPLAQWREGVGVGGNKESGSSSKLLRSEIPLSRHGRGNKLASAIVNPKSSNSDA 175 Query: 471 ----DISYKGRDIVAYDDL 427 D+ +KGR+IVAYDD+ Sbjct: 176 SSVLDVPFKGREIVAYDDI 194 >ref|XP_003631284.1| PREDICTED: uncharacterized protein At1g27050-like [Vitis vinifera] gi|296086437|emb|CBI32026.3| unnamed protein product [Vitis vinifera] Length = 187 Score = 122 bits (307), Expect = 1e-25 Identities = 82/194 (42%), Positives = 104/194 (53%), Gaps = 8/194 (4%) Frame = -2 Query: 984 MGRKRDKPYFSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLVHNLS 805 M RKR+KPY S SS K+ R + + E P + + VLV LS Sbjct: 1 MSRKREKPYHSRHALSSIAKRRRPS------LLELPDSASRDAPATKHSSPGAVLVIGLS 54 Query: 804 NHCSVLNLKRMFEMYGCVSRIRID-SGVGYVNFRXXXXXXXXXXASVDP--GIIVDDVKV 634 CSVL+LK FE+YGC+SRIRID GVGY+ FR AS DP GI +D +V Sbjct: 55 PECSVLDLKSRFEIYGCISRIRIDRDGVGYITFRSKDSADAAITASQDPSFGITIDSKRV 114 Query: 633 NVSWANDSFPQWREGVALSIKERLSSKLVQPEVPLSRHGRGNKLGSGTVSPNKP-----D 469 V A D P G + SSKL++ EVPLSRHGR NKL S + P D Sbjct: 115 QVLLAKD--PNSAVGFGSNKDNGSSSKLLRAEVPLSRHGRSNKLVSSSAKPKTDPIAGLD 172 Query: 468 ISYKGRDIVAYDDL 427 +++KGR++VAYDD+ Sbjct: 173 VAFKGREMVAYDDI 186 >ref|XP_003517921.1| PREDICTED: uncharacterized protein At1g27050-like [Glycine max] Length = 218 Score = 121 bits (303), Expect = 3e-25 Identities = 79/202 (39%), Positives = 105/202 (51%), Gaps = 12/202 (5%) Frame = -2 Query: 996 HSFKMGRKRDKPYFSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLV 817 H+ M RKRD+ + ++ + P +PE E T P S V+V Sbjct: 28 HNTTMSRKRDRSAYFSRHDAAKRRLP---------LPEPAEEETPTMRPAP---PSAVVV 75 Query: 816 HNLSNHCSVLNLKRMFEMYGCVSRIRID-SGVGYVNFRXXXXXXXXXXASVDP--GIIVD 646 L CSVL+LK FE+YG +SRIRID VGY+ +R A +DP GI V+ Sbjct: 76 MGLPQDCSVLDLKSRFEIYGAISRIRIDRDAVGYITYRTKDSADAAIAAGLDPTFGITVN 135 Query: 645 DVKVNVSWANDSFPQWREGVALSIKERLSSKLVQPEVPLSRHGRGNKLGS---------G 493 V V WA D WREGV S + SKLV+ EVPLS+HGRGN+L S Sbjct: 136 SKMVQVLWATDPLAMWREGVGNSRNKGSMSKLVRAEVPLSKHGRGNRLASPIGNTKLSEA 195 Query: 492 TVSPNKPDISYKGRDIVAYDDL 427 + + ++S+KGR+IVAYDD+ Sbjct: 196 SSGSSVLEVSFKGREIVAYDDI 217