BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000478
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein lig...   139   2e-30
ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein lig...   137   4e-30
ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus c...   129   1e-27
ref|XP_003631284.1| PREDICTED: uncharacterized protein At1g27050...   122   1e-25
ref|XP_003517921.1| PREDICTED: uncharacterized protein At1g27050...   121   3e-25

>ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score =  139 bits (349), Expect = 2e-30
 Identities = 83/199 (41%), Positives = 118/199 (59%), Gaps = 13/199 (6%)
 Frame = -2

Query: 984 MGRKRDKPY-FSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLVH-N 811
           MGRKRDKPY  SH P+S+    P++        P      ++ + P  +    + LV  +
Sbjct: 1   MGRKRDKPYPSSHLPTSA----PKRRR------PPPSTENDDLEKPVSKPAPPLALVVVD 50

Query: 810 LSNHCSVLNLKRMFEMYGCVSRIRIDSG-VGYVNFRXXXXXXXXXXASVDPGII--VDDV 640
           L +HCSVL+LK  FE+YG +SRIRID   VGY+ +R          A++DP     +D  
Sbjct: 51  LPSHCSVLDLKSRFEIYGSISRIRIDRDCVGYITYRTKDSADAAMTAALDPSFAFTIDSK 110

Query: 639 KVNVSWANDSFPQWREGVALSIKER--LSSKLVQPEVPLSRHGRGNKLGSGTVSP----- 481
           KV V WAND   QWR+G+ + + +   LSSKL++ EVPLSRHGR NKL S  V+P     
Sbjct: 111 KVQVLWANDPQVQWRQGINVGVNKNKELSSKLLRAEVPLSRHGRSNKLASAIVNPRRSNS 170

Query: 480 -NKPDISYKGRDIVAYDDL 427
            ++ D+ ++GR++VAYDD+
Sbjct: 171 SSRSDVPFRGREVVAYDDI 189


>ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  137 bits (346), Expect = 4e-30
 Identities = 83/199 (41%), Positives = 117/199 (58%), Gaps = 13/199 (6%)
 Frame = -2

Query: 984 MGRKRDKPY-FSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLVH-N 811
           MGRKRDKPY  SH P+S+    P++        P      ++ + P  +    + LV  +
Sbjct: 1   MGRKRDKPYPSSHLPTSA----PKRRR------PPPSTENDDLEKPVSKPAPPLALVVVD 50

Query: 810 LSNHCSVLNLKRMFEMYGCVSRIRIDSG-VGYVNFRXXXXXXXXXXASVDPGII--VDDV 640
           L +HCSVL+LK  FE+YG +SRIRID   VGY+ +R          A++DP     +D  
Sbjct: 51  LPSHCSVLDLKSRFEIYGSISRIRIDRDCVGYITYRTKDSADAAMTAALDPSFAFTIDSK 110

Query: 639 KVNVSWANDSFPQWREGVALSIKER--LSSKLVQPEVPLSRHGRGNKLGSGTVSP----- 481
           KV V WAND   QW +G+ + + +   LSSKL+Q EVPLSRHGR NKL S  V+P     
Sbjct: 111 KVQVLWANDPQVQWGQGINVGVNKNKELSSKLLQAEVPLSRHGRSNKLASAIVNPRRSNS 170

Query: 480 -NKPDISYKGRDIVAYDDL 427
            ++ D+ ++GR++VAYDD+
Sbjct: 171 SSRSDVPFRGREVVAYDDI 189


>ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus communis]
           gi|223540641|gb|EEF42204.1| hypothetical protein
           RCOM_0698730 [Ricinus communis]
          Length = 195

 Score =  129 bits (325), Expect = 1e-27
 Identities = 82/199 (41%), Positives = 107/199 (53%), Gaps = 13/199 (6%)
 Frame = -2

Query: 984 MGRKRDKPYFSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNP-PQRQTTSMVLVHNL 808
           M RKRD PYFS          P++        P  P  E+E   P P  Q+   V+V  L
Sbjct: 1   MSRKRDNPYFSR---HDRVPFPKRRRPLPPHPP--PSAEDEIDKPTPTPQSPPAVVVMGL 55

Query: 807 SNHCSVLNLKRMFEMYGCVSRIRIDSGVGYVNFRXXXXXXXXXXASVDP--GIIVDDVKV 634
             +CSVL+LK  FE+YG +SR RID  V  + FR          A++D   GI +   +V
Sbjct: 56  PPNCSVLDLKSRFEIYGEISRTRIDRDVALITFRTRDSAEAAIAAALDTSFGITIGSKRV 115

Query: 633 NVSWANDSFPQWREGVAL--SIKERLSSKLVQPEVPLSRHGRGNKLGSGTVSPNKP---- 472
            V WA D   QWREGV +  + +   SSKL++ E+PLSRHGRGNKL S  V+P       
Sbjct: 116 QVLWATDPLAQWREGVGVGGNKESGSSSKLLRSEIPLSRHGRGNKLASAIVNPKSSNSDA 175

Query: 471 ----DISYKGRDIVAYDDL 427
               D+ +KGR+IVAYDD+
Sbjct: 176 SSVLDVPFKGREIVAYDDI 194


>ref|XP_003631284.1| PREDICTED: uncharacterized protein At1g27050-like [Vitis vinifera]
           gi|296086437|emb|CBI32026.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score =  122 bits (307), Expect = 1e-25
 Identities = 82/194 (42%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
 Frame = -2

Query: 984 MGRKRDKPYFSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLVHNLS 805
           M RKR+KPY S    SS  K+ R +      + E P          +  +   VLV  LS
Sbjct: 1   MSRKREKPYHSRHALSSIAKRRRPS------LLELPDSASRDAPATKHSSPGAVLVIGLS 54

Query: 804 NHCSVLNLKRMFEMYGCVSRIRID-SGVGYVNFRXXXXXXXXXXASVDP--GIIVDDVKV 634
             CSVL+LK  FE+YGC+SRIRID  GVGY+ FR          AS DP  GI +D  +V
Sbjct: 55  PECSVLDLKSRFEIYGCISRIRIDRDGVGYITFRSKDSADAAITASQDPSFGITIDSKRV 114

Query: 633 NVSWANDSFPQWREGVALSIKERLSSKLVQPEVPLSRHGRGNKLGSGTVSPNKP-----D 469
            V  A D  P    G   +     SSKL++ EVPLSRHGR NKL S +  P        D
Sbjct: 115 QVLLAKD--PNSAVGFGSNKDNGSSSKLLRAEVPLSRHGRSNKLVSSSAKPKTDPIAGLD 172

Query: 468 ISYKGRDIVAYDDL 427
           +++KGR++VAYDD+
Sbjct: 173 VAFKGREMVAYDDI 186


>ref|XP_003517921.1| PREDICTED: uncharacterized protein At1g27050-like [Glycine max]
          Length = 218

 Score =  121 bits (303), Expect = 3e-25
 Identities = 79/202 (39%), Positives = 105/202 (51%), Gaps = 12/202 (5%)
 Frame = -2

Query: 996 HSFKMGRKRDKPYFSHAPSSSNFKKPRKNHSFSSFIPETPVIEEETKNPPQRQTTSMVLV 817
           H+  M RKRD+  +     ++  + P         +PE    E  T  P      S V+V
Sbjct: 28  HNTTMSRKRDRSAYFSRHDAAKRRLP---------LPEPAEEETPTMRPAP---PSAVVV 75

Query: 816 HNLSNHCSVLNLKRMFEMYGCVSRIRID-SGVGYVNFRXXXXXXXXXXASVDP--GIIVD 646
             L   CSVL+LK  FE+YG +SRIRID   VGY+ +R          A +DP  GI V+
Sbjct: 76  MGLPQDCSVLDLKSRFEIYGAISRIRIDRDAVGYITYRTKDSADAAIAAGLDPTFGITVN 135

Query: 645 DVKVNVSWANDSFPQWREGVALSIKERLSSKLVQPEVPLSRHGRGNKLGS---------G 493
              V V WA D    WREGV  S  +   SKLV+ EVPLS+HGRGN+L S          
Sbjct: 136 SKMVQVLWATDPLAMWREGVGNSRNKGSMSKLVRAEVPLSKHGRGNRLASPIGNTKLSEA 195

Query: 492 TVSPNKPDISYKGRDIVAYDDL 427
           +   +  ++S+KGR+IVAYDD+
Sbjct: 196 SSGSSVLEVSFKGREIVAYDDI 217