BLASTX nr result

ID: Coptis24_contig00000473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000473
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285275.1| PREDICTED: uncharacterized protein LOC100257...   177   9e-42
ref|XP_003542671.1| PREDICTED: uncharacterized protein LOC100784...   171   5e-40
ref|XP_003549754.1| PREDICTED: uncharacterized protein LOC100809...   171   6e-40
gb|ABK95066.1| unknown [Populus trichocarpa]                          170   1e-39
gb|AFK34161.1| unknown [Medicago truncatula]                          169   2e-39

>ref|XP_002285275.1| PREDICTED: uncharacterized protein LOC100257716 [Vitis vinifera]
           gi|297738966|emb|CBI28211.3| unnamed protein product
           [Vitis vinifera]
          Length = 288

 Score =  177 bits (448), Expect = 9e-42
 Identities = 77/102 (75%), Positives = 95/102 (93%)
 Frame = -3

Query: 858 NIEAYYKTMVKANPANSLVLGNYARFLKEVKGDLVKAEEYCGRAILANPGDGSVLSLYAD 679
           N+E+YY+TM++ANP N+L+LGNYARFLKEV+GD +KAEEYCGRAILANP DG++LSL+AD
Sbjct: 151 NMESYYRTMIEANPGNALLLGNYARFLKEVRGDYIKAEEYCGRAILANPNDGNILSLFAD 210

Query: 678 LIWQTHKDASRAESYFDQAVQAAPDDCYVMASYARFLWDTEE 553
           LIWQ HKD+ RAESYFDQAV+A+PDDC+V+ASYA FLW+ EE
Sbjct: 211 LIWQVHKDSDRAESYFDQAVKASPDDCFVLASYAHFLWEEEE 252



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
 Frame = -3

Query: 1368 MLLRSSSTPILNSWIPQTKESSAEAEFVHQIQRPRXXXXXXXXXXXXXPTHDESHERTTS 1189
            MLLRSSSTPILNSW P +KESS+E E V QI   R              + + S ++ + 
Sbjct: 1    MLLRSSSTPILNSWPPNSKESSSEPEMVPQILLSR----SISLTTSSLSSVEGSSKKMSR 56

Query: 1188 ALFENDLNE--LPNRKYLYR---RFSTSSVDEKRQD 1096
            AL E DL E  LP RK + +   R S+  VDE+ ++
Sbjct: 57   ALSETDLRELSLPKRKPITKTVNRLSSLPVDEREEE 92


>ref|XP_003542671.1| PREDICTED: uncharacterized protein LOC100784254 [Glycine max]
          Length = 257

 Score =  171 bits (433), Expect = 5e-40
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = -3

Query: 852 EAYYKTMVKANPANSLVLGNYARFLKEVKGDLVKAEEYCGRAILANPGDGSVLSLYADLI 673
           + YY+TM++ANP N L LGNYAR+LKEV+GD VKAEEYCGRAILANP DG VLS+YADLI
Sbjct: 125 DLYYRTMIEANPGNPLFLGNYARYLKEVRGDYVKAEEYCGRAILANPNDGKVLSMYADLI 184

Query: 672 WQTHKDASRAESYFDQAVQAAPDDCYVMASYARFLWDTE 556
           W++ KDASRAE+YFDQAV+AAPDDCYV+ASYA FLWD E
Sbjct: 185 WESQKDASRAETYFDQAVKAAPDDCYVLASYAHFLWDAE 223


>ref|XP_003549754.1| PREDICTED: uncharacterized protein LOC100809777 [Glycine max]
          Length = 261

 Score =  171 bits (432), Expect = 6e-40
 Identities = 77/100 (77%), Positives = 89/100 (89%)
 Frame = -3

Query: 852 EAYYKTMVKANPANSLVLGNYARFLKEVKGDLVKAEEYCGRAILANPGDGSVLSLYADLI 673
           + YY+TM++ANP N L LGNYAR+LKEV+GD VKAEEYC RAILANP DG VLS+YADLI
Sbjct: 129 DLYYRTMIEANPGNPLFLGNYARYLKEVRGDYVKAEEYCSRAILANPNDGKVLSMYADLI 188

Query: 672 WQTHKDASRAESYFDQAVQAAPDDCYVMASYARFLWDTEE 553
           W++ KDASRAE+YFDQAV+AAPDDCYV+ASYA FLWD EE
Sbjct: 189 WESQKDASRAETYFDQAVKAAPDDCYVLASYAHFLWDAEE 228


>gb|ABK95066.1| unknown [Populus trichocarpa]
          Length = 304

 Score =  170 bits (430), Expect = 1e-39
 Identities = 80/100 (80%), Positives = 89/100 (89%)
 Frame = -3

Query: 852 EAYYKTMVKANPANSLVLGNYARFLKEVKGDLVKAEEYCGRAILANPGDGSVLSLYADLI 673
           +AYY+TM++ANP N L L NYARFLKEV+ D VKAEEYCGRAILANP D  VLS+YADLI
Sbjct: 168 DAYYQTMIEANPGNPLFLRNYARFLKEVRLDFVKAEEYCGRAILANPNDADVLSMYADLI 227

Query: 672 WQTHKDASRAESYFDQAVQAAPDDCYVMASYARFLWDTEE 553
           WQ+HKDASRAESYF +AV+AAPDDCYVMASYARFLWD EE
Sbjct: 228 WQSHKDASRAESYFLRAVKAAPDDCYVMASYARFLWDAEE 267


>gb|AFK34161.1| unknown [Medicago truncatula]
          Length = 292

 Score =  169 bits (428), Expect = 2e-39
 Identities = 76/100 (76%), Positives = 89/100 (89%)
 Frame = -3

Query: 852 EAYYKTMVKANPANSLVLGNYARFLKEVKGDLVKAEEYCGRAILANPGDGSVLSLYADLI 673
           + YY+TM++ANP N L LGNYA++LKEV+ D VKAEEYCGRAILANP DG+VLSLYADLI
Sbjct: 163 DLYYRTMIEANPGNPLFLGNYAKYLKEVRKDYVKAEEYCGRAILANPNDGNVLSLYADLI 222

Query: 672 WQTHKDASRAESYFDQAVQAAPDDCYVMASYARFLWDTEE 553
           W+ HKDA RAE+YFDQAV+AAPDDCYV+ASYA FLWD +E
Sbjct: 223 WECHKDAPRAETYFDQAVKAAPDDCYVLASYAHFLWDADE 262



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
 Frame = -3

Query: 1368 MLLRSSSTPILNSWIPQT--KESSAEAEFVHQIQRPRXXXXXXXXXXXXXPTH-DESHER 1198
            MLLRSSSTP++N WIP T  K+SS E EF+H+I + R              +    S  +
Sbjct: 1    MLLRSSSTPVMNPWIPHTNSKDSSPEPEFLHRIPKSRSVTLSASSSTSSSRSPICGSVSK 60

Query: 1197 TTSALFENDLNELPNRKYLYRRFSTSSVDEKRQDMDGVYAR 1075
             T AL E DL+   NRK L+RR      +E R    G  +R
Sbjct: 61   MTRALSETDLSSQLNRKPLHRRQFDEDEEESRTGTFGARSR 101


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