BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000461
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   167   4e-39
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   166   8e-39
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   159   7e-37
ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|35548...   155   1e-35
ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|35548...   155   1e-35

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  167 bits (423), Expect = 4e-39
 Identities = 108/323 (33%), Positives = 169/323 (52%), Gaps = 14/323 (4%)
 Frame = -1

Query: 983 KSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYSVDYS-----TS 819
           K LL  R VSKPWC+LID PNFVKLHL  + + ++   ++     +++ +D+        
Sbjct: 19  KELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVHYMDFEQNLVLND 78

Query: 818 CTEAVEIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEYKKLPIAPAVAESI 642
           C    E+++P     +G++++GS NGLLCI     D+ +WNP T +++ +P  P   +  
Sbjct: 79  CVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRY 138

Query: 641 EDWESHITY--GFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSVVEVYSLGTN 468
              +S   Y  GFGYDS  DDYK+V++A    G                S V+VYSL   
Sbjct: 139 FGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGG----------GKRSFESEVKVYSLRKQ 188

Query: 467 SWHRIENSQY--YMCSNSALCVNQRLNWLATKKASSDVPTLIVSFDFVAEQFREV--PHP 300
           SW RI +  Y  +    + +  N  L+W+  +   S+V  ++V+ D   E +REV  P  
Sbjct: 189 SWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEY 248

Query: 299 KCVCSIMDAQVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLSTIPLLT*VE-QPMMR 123
           K     +D  VL G LC L    G   D+W+MK+YGV +SW  L ++     +     ++
Sbjct: 249 KDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLK 308

Query: 122 ILSFSKIG-KLLLEYDHEDLVLY 57
            L++SK G ++L+E+D+ DL  Y
Sbjct: 309 PLAYSKSGDEVLIEHDNLDLCWY 331


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  166 bits (420), Expect = 8e-39
 Identities = 118/351 (33%), Positives = 185/351 (52%), Gaps = 26/351 (7%)
 Frame = -1

Query: 983  KSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYSVDYSTSCTEAV 804
            KSL +FRCVSK WC  ID P F+  HL ++++ +    ++  D  NL +VD  +    ++
Sbjct: 18   KSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLCTVDLDSPDFTSI 77

Query: 803  EI-DYPGKGSFNGVEIVGSCNGLLC-IHTDFFDVIWNPCTNEYKKLPIAPAVAESIEDWE 630
            E+ + P K      E++GSCNGLL  +++DF   ++NP T E K +P++P    +  D +
Sbjct: 78   ELKNNPLKSDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKMIPVSPLELPNDLD-D 136

Query: 629  SHIT-----YGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSVVEVYSLGTNS 465
            S ++     YGFG+D   +DYKVV+  F+H          D  +      V+VYSL +NS
Sbjct: 137  SKVSSLFNFYGFGHDPINEDYKVVR--FIH-------FYGDSPDGFFHCEVKVYSLKSNS 187

Query: 464  WHRIENSQYYM-----------CSNS-ALCVNQRLNWLAT--KKASSDVPTLIVSFDFVA 327
            W RI++  Y +           C     +  N  ++W AT   K   +   LIV+FD  A
Sbjct: 188  WKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLIVAFDLGA 247

Query: 326  EQFREVPHPKCVCS--IMDAQVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLSTIPL 153
            E+F+ +P P    +   M+  VLGG LC+    +    ++WVMK+YGV +SW  L T+  
Sbjct: 248  EEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKESWTHLCTVIA 307

Query: 152  LT*VEQPMM--RILSFSKIG-KLLLEYDHEDLVLYYPELEQYEVLQICGFP 9
               V+   +  R L++SK G K+LLE D+   V Y     + ++++I G P
Sbjct: 308  QLQVKAFWLHARPLAYSKGGDKILLELDNRFFVWYDLRRRKSKIIRIRGAP 358


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  159 bits (403), Expect = 7e-37
 Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 13/338 (3%)
 Frame = -1

Query: 983 KSLLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYSVDYSTSCTEAV 804
           K LL+ R   K W +LID  +F+ LHL+++ +    S+++   +  LY +D + S     
Sbjct: 19  KPLLRLRSTCKWWRNLIDSTDFIFLHLSKSRD----SVIILRQHSRLYELDLN-SMDRVK 73

Query: 803 EIDYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEYKKLPIAPAVAESIEDWES 627
           E+D+P     N ++++GSCNGLLCI     D+  WNP   +++ +P  P + +   +  +
Sbjct: 74  ELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPSEPLIRKETNENNT 133

Query: 626 HIT------YGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSVVEVYSLGTNS 465
             T      YGFGYDS  DDYK+V +++            D +N    S V++Y++ T+ 
Sbjct: 134 ITTLLAAHVYGFGYDSATDDYKLVSISYFV----------DLHNRSFDSHVKIYTMRTDV 183

Query: 464 WHRIENSQYYMCS--NSALCVNQRLNWLATKKASSDVPTLIVSFDFVAEQFREVPHPKCV 291
           W  + +  Y +C      + V+  L+W+ T+    +   LIV+FD   E FREV  P  V
Sbjct: 184 WKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTV 243

Query: 290 CSI--MDAQVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLSTIPLLT*VE-QPMMRI 120
                MD  +L G LCI+      G D+WVM++YG  DSW  + T+     V+    ++ 
Sbjct: 244 DGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKMFTVGQPRDVKLMKSLKP 303

Query: 119 LSFSKIG-KLLLEYDHEDLVLYYPELEQYEVLQICGFP 9
           L +S+ G K+L E D + L  Y    +    ++I G P
Sbjct: 304 LGYSRNGDKVLFEQDSKKLCWYNLASKDVSWVRISGIP 341


>ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|355483285|gb|AES64488.1| F-box
            protein [Medicago truncatula]
          Length = 391

 Score =  155 bits (392), Expect = 1e-35
 Identities = 111/344 (32%), Positives = 164/344 (47%), Gaps = 21/344 (6%)
 Frame = -1

Query: 977  LLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYSVDYSTSCTEAVEI 798
            LL+FR  SK   S+ID   F  LHL    +N+N   ++   N NLY +D+  + T  + +
Sbjct: 21   LLRFRSTSKSLKSIIDSHTFTNLHL----KNSNNFYLIIRHNANLYQLDFP-NLTPPIPL 75

Query: 797  DYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEYKKLPIAPAVAESIEDWESHI 621
            ++P     N + + GSCNGL+CI     D+  WNP   +++ +P  P    S  D     
Sbjct: 76   NHPLMSYSNRITLFGSCNGLICISNIADDIAFWNPNIRKHRIIPYLPTTPRSESDTTLFA 135

Query: 620  T--YGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSVVEVYSLGTNSWHRIEN 447
               +GFGYDS   DYK+V++++            D  N    S V V+SL  NSW  + +
Sbjct: 136  ARVHGFGYDSFAGDYKLVRISYFV----------DLQNRSFDSQVRVFSLKMNSWKELPS 185

Query: 446  SQYYMCSNSALCV---------NQRLNWLATKKASSDVPTLIVSFDFVAEQFREVPHPKC 294
              Y +C    + V         +  L+W+ T+K     P LIV+F+   E F EVP P+ 
Sbjct: 186  MNYALCCARTMGVFVEDSNNLNSNSLHWVVTRKLEPFQPDLIVAFNLTLEIFNEVPLPEI 245

Query: 293  -------VCSIMDAQVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLST-IPLLT*VE 138
                       +D  VLGG L ++        D+WVMK+YG+ DSW  L T + L     
Sbjct: 246  GEVNNESESFEIDVAVLGGCLSMIVNYQTTQIDVWVMKEYGLKDSWCKLFTLVGLFFPTP 305

Query: 137  QPMMRILSFSKIG-KLLLEYDHEDLVLYYPELEQYEVLQICGFP 9
               +R L +S  G K+LLE D + L  Y  +L+   V  + G P
Sbjct: 306  LKSLRPLGYSSDGKKVLLEIDRKKLFWY--DLKSENVTSVPGIP 347


>ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|355483286|gb|AES64489.1| F-box
            protein [Medicago truncatula]
          Length = 398

 Score =  155 bits (392), Expect = 1e-35
 Identities = 111/344 (32%), Positives = 164/344 (47%), Gaps = 21/344 (6%)
 Frame = -1

Query: 977  LLKFRCVSKPWCSLIDDPNFVKLHLNQATENNNISLMVCDDNENLYSVDYSTSCTEAVEI 798
            LL+FR  SK   S+ID   F  LHL    +N+N   ++   N NLY +D+  + T  + +
Sbjct: 21   LLRFRSTSKSLKSIIDSHTFTNLHL----KNSNNFYLIIRHNANLYQLDFP-NLTPPIPL 75

Query: 797  DYPGKGSFNGVEIVGSCNGLLCIHTDFFDV-IWNPCTNEYKKLPIAPAVAESIEDWESHI 621
            ++P     N + + GSCNGL+CI     D+  WNP   +++ +P  P    S  D     
Sbjct: 76   NHPLMSYSNRITLFGSCNGLICISNIADDIAFWNPNIRKHRIIPYLPTTPRSESDTTLFA 135

Query: 620  T--YGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSVVEVYSLGTNSWHRIEN 447
               +GFGYDS   DYK+V++++            D  N    S V V+SL  NSW  + +
Sbjct: 136  ARVHGFGYDSFAGDYKLVRISYFV----------DLQNRSFDSQVRVFSLKMNSWKELPS 185

Query: 446  SQYYMCSNSALCV---------NQRLNWLATKKASSDVPTLIVSFDFVAEQFREVPHPKC 294
              Y +C    + V         +  L+W+ T+K     P LIV+F+   E F EVP P+ 
Sbjct: 186  MNYALCCARTMGVFVEDSNNLNSNSLHWVVTRKLEPFQPDLIVAFNLTLEIFNEVPLPEI 245

Query: 293  -------VCSIMDAQVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLST-IPLLT*VE 138
                       +D  VLGG L ++        D+WVMK+YG+ DSW  L T + L     
Sbjct: 246  GEVNNESESFEIDVAVLGGCLSMIVNYQTTQIDVWVMKEYGLKDSWCKLFTLVGLFFPTP 305

Query: 137  QPMMRILSFSKIG-KLLLEYDHEDLVLYYPELEQYEVLQICGFP 9
               +R L +S  G K+LLE D + L  Y  +L+   V  + G P
Sbjct: 306  LKSLRPLGYSSDGKKVLLEIDRKKLFWY--DLKSENVTSVPGIP 347