BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000459
         (1977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19401.3| unnamed protein product [Vitis vinifera]              710   0.0  
ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-...   688   0.0  
ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|2...   672   0.0  
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-...   671   0.0  
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...   670   0.0  

>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  710 bits (1833), Expect = 0.0
 Identities = 346/458 (75%), Positives = 389/458 (84%), Gaps = 4/458 (0%)
 Frame = +2

Query: 224  MWKQVGEREVGKLKPHSFANRIKSNRISSLQLSNHKEIVSAHRGAVNSLQVDLTDGRYLL 403
            MWK +G+RE GKL+P+SF+NRI S+RI+SLQLSN+KEIVS HRGAVNSLQVDLT+GRYLL
Sbjct: 1    MWKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLL 60

Query: 404  AGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVSSAVWYPIDTGLFV 583
            +GASD SAAVYDIQ A  YEGG LVAKH+SIFVVDKQHE GHKYA+SSA+WYPIDTGLF+
Sbjct: 61   SGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFI 120

Query: 584  TGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASG 763
            TGS+DHY+NVWDTNTTQVV+NFKMPGK+YRTAMSS+A +HMLIA GTEDVQVRLCDIASG
Sbjct: 121  TGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASG 180

Query: 764  AFTHTLSGHRDGVMTVEWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVGRRP 943
            AF HTLSGHRDGVMTVEWS SSEWVL+TGGCDGAIRFWDIRRAGCFLVLDQS+SQ+GRRP
Sbjct: 181  AFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP 240

Query: 944  PFL-LKSSLKGSTSNSIPGSQSSFPKARMLHKKAAYGNGTKHTS---TTHKNKGSTSQRL 1111
            P L   ++ K   S S P SQS   ++R   +K AYGNG+K ++   T+ + KG   QRL
Sbjct: 241  PLLECSTANKAPMSKSFPASQSVNVRSRAPQRKFAYGNGSKQSATGRTSSQAKGLVRQRL 300

Query: 1112 HPGMLSSHDRATAHYGAVIGLKVCEDSMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQ 1291
            HPGMLSS DRAT+HYGAV GLKV +D MYLLSAGSDSRLRLWDI SGCNTLVNFE  RLQ
Sbjct: 301  HPGMLSSQDRATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQ 360

Query: 1292 TSKGIQLAVTQGSSLVFVPCMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQELYTG 1471
            TSK +QLA+T  S+LVFVPCM+AVKAFDVWSG+T +TFRGHYE VNCCW S QDQELYTG
Sbjct: 361  TSKAMQLAITNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQELYTG 420

Query: 1472 SNDRQILVWSPSRSVHAEVDERGGEALMSTSDQDNWSD 1585
             NDRQILVWSPSR    E+D    E  +   DQDNWSD
Sbjct: 421  GNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 458


>ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-8-like [Vitis vinifera]
          Length = 450

 Score =  688 bits (1776), Expect = 0.0
 Identities = 340/459 (74%), Positives = 382/459 (83%), Gaps = 5/459 (1%)
 Frame = +2

Query: 224  MWKQVGEREVGKLKPHSFANRIKSNRISSLQLSNHKEIVSAHRGAVNSLQVDLTDGRYLL 403
            MWK +G+RE GKL+P+SF+NRI S+RI+SLQLSN+KEIVS HRGAVNSLQVDLT+GRYLL
Sbjct: 1    MWKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLL 60

Query: 404  AGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVSSAVWYPIDTGLFV 583
            +GASD SAAVYDIQ A  YEGG LVAKH+SIFVVDKQHE GHKYA+SSA+WYPIDTGLF+
Sbjct: 61   SGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFI 120

Query: 584  TGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASG 763
            TGS+DHY+NVWDTNTTQVV+NFKMPGK+YRTAMSS+A +HMLIA GTEDVQVRLCDIASG
Sbjct: 121  TGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASG 180

Query: 764  AFTHTLSGHRDGVMTVEWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVGRRP 943
            AF HTLSGHRDGVMTVEWS SSEWVL+TGGCDGAIRFWDIRRAGCFLVLDQS+SQ+GRRP
Sbjct: 181  AFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP 240

Query: 944  PFLLKSSLKGSTSNSIPGSQSSFPKA-----RMLHKKAAYGNGTKHTSTTHKNKGSTSQR 1108
            P      L+ ST+N +   + +          +LH K   G+ T  TS+  + KG   QR
Sbjct: 241  PL-----LECSTANKVSFLKQNVSMGMEVGLHVLHSKT--GSATGRTSS--QAKGLVRQR 291

Query: 1109 LHPGMLSSHDRATAHYGAVIGLKVCEDSMYLLSAGSDSRLRLWDIESGCNTLVNFEATRL 1288
            LHPGMLSS DRAT+HYGAV GLKV +D MYLLSAGSDSRLRLWDI SGCNTLVNFE  RL
Sbjct: 292  LHPGMLSSQDRATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRL 351

Query: 1289 QTSKGIQLAVTQGSSLVFVPCMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQELYT 1468
            QTSK +QLA+T  S+LVFVPCM+AVKAFDVWSG+T +TFRGHYE VNCCW S QDQELYT
Sbjct: 352  QTSKAMQLAITNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQELYT 411

Query: 1469 GSNDRQILVWSPSRSVHAEVDERGGEALMSTSDQDNWSD 1585
            G NDRQILVWSPSR    E+D    E  +   DQDNWSD
Sbjct: 412  GGNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 450


>ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|222860803|gb|EEE98345.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  672 bits (1733), Expect = 0.0
 Identities = 324/458 (70%), Positives = 381/458 (83%), Gaps = 4/458 (0%)
 Frame = +2

Query: 224  MWKQVGEREVGKLKPHSFANRIKSNRISSLQLSNHKEIVSAHRGAVNSLQVDLTDGRYLL 403
            MW+++ +RE GK +P+SF NR+ S+RIS+LQLSN+K++VS HRG++NSLQVDLT+GRYLL
Sbjct: 1    MWREIRDREAGKTRPNSFKNRVSSSRISNLQLSNYKDVVSPHRGSINSLQVDLTEGRYLL 60

Query: 404  AGASDGSAAVYDIQCAARYEGGG---LVAKHESIFVVDKQHEQGHKYAVSSAVWYPIDTG 574
            +GASD SA+V+DIQ A  +EGGG   L+AKH+S+  +DKQH+ GHK+A+SSA+WYPIDTG
Sbjct: 61   SGASDASASVFDIQHATDFEGGGEGALIAKHKSLITIDKQHQNGHKFAISSAIWYPIDTG 120

Query: 575  LFVTGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVAKSHMLIATGTEDVQVRLCDI 754
            LFVTGS+DHY+ VWDTN+TQ+V+NFK+PGKVYRTAMS +A SHMLIA GTEDVQVRLCDI
Sbjct: 121  LFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDI 180

Query: 755  ASGAFTHTLSGHRDGVMTVEWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVG 934
            ASGAF HTLSGHRDGVMTVEWS SSEWVL+TGGCDGAIRFWDIRRAGCFLVLDQS+SQ+G
Sbjct: 181  ASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLG 240

Query: 935  RRPPFLLKSSLKGSTSNSIPGSQSSFPKARMLHKKAAYGNGTKHTSTTH-KNKGSTSQRL 1111
            RRPP L +S++  STS ++   Q+   K RM  KK+  GNG KH+       KG   QRL
Sbjct: 241  RRPPVLARSAV--STSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQRL 298

Query: 1112 HPGMLSSHDRATAHYGAVIGLKVCEDSMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQ 1291
            HPGMLSS DRATAHYGAV GLK+ ED MYLLSAGSDSR+RLWD+ESG NTLVNFE  RLQ
Sbjct: 299  HPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQ 358

Query: 1292 TSKGIQLAVTQGSSLVFVPCMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQELYTG 1471
            TSK IQLA  Q S+LVFVPCM++VKAFDVWSG+T++TFRGHYE+VNCCWFSSQDQELYTG
Sbjct: 359  TSKPIQLATAQDSNLVFVPCMTSVKAFDVWSGKTYVTFRGHYEHVNCCWFSSQDQELYTG 418

Query: 1472 SNDRQILVWSPSRSVHAEVDERGGEALMSTSDQDNWSD 1585
             NDRQILVWSP+R +         E      DQDNWSD
Sbjct: 419  GNDRQILVWSPARLI-------PNEDASPAEDQDNWSD 449


>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis sativus]
            gi|449482714|ref|XP_004156381.1| PREDICTED: DNA excision
            repair protein ERCC-8-like [Cucumis sativus]
          Length = 446

 Score =  671 bits (1730), Expect = 0.0
 Identities = 330/455 (72%), Positives = 381/455 (83%), Gaps = 1/455 (0%)
 Frame = +2

Query: 224  MWKQVGEREVGKLKPHSFANRIKSNRISSLQLSNHKEIVSAHRGAVNSLQVDLTDGRYLL 403
            MWK + +RE GKL+P+SFANR+KS+R SSLQLSNHK+IVS HRG+VNSLQVDLT+GRYLL
Sbjct: 1    MWKNIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 404  AGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVSSAVWYPIDTGLFV 583
            +GASD SAAV+DIQ A   EG  L+AKH+ IF VDKQHE GHKYA+SSA+WYP+DTGLFV
Sbjct: 61   SGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 118

Query: 584  TGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASG 763
            TGSFDH++NVWDTNTTQVV+NFK+PGKVYRTAMSS+A SHMLIA GTEDVQVRLCDI+SG
Sbjct: 119  TGSFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 178

Query: 764  AFTHTLSGHRDGVMTVEWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVGRRP 943
            AF+HTLSGHRDGVM+VEWS SSEWVL+TGGCDGAIRFWDIRRAGCF VLDQS+SQ+GRRP
Sbjct: 179  AFSHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 238

Query: 944  PFLLKSSLKGSTSNSIPGSQSSFPKARMLHKKAAYGNGTKHTSTTH-KNKGSTSQRLHPG 1120
            P    ++ K STS S+  SQ S  K+R+ HKK   GN TK +ST     KGST QRLHPG
Sbjct: 239  PISGWTANKLSTSKSLLASQGSNMKSRIPHKKLTNGNATKPSSTGKLPAKGSTRQRLHPG 298

Query: 1121 MLSSHDRATAHYGAVIGLKVCEDSMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQTSK 1300
            +LS  DRA +HYGAV GLKV  D MYLLSAGSDSRL+LWD+ESGCNTLVNFE  RLQT+K
Sbjct: 299  LLSGQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNK 358

Query: 1301 GIQLAVTQGSSLVFVPCMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQELYTGSND 1480
             +QLA +Q SSLVF PCM+ VKAFD+W+G+T LTF GHYE VNCCW++  DQELYTG ND
Sbjct: 359  PLQLATSQDSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGND 418

Query: 1481 RQILVWSPSRSVHAEVDERGGEALMSTSDQDNWSD 1585
            RQILVWSPS++   E+D        ST+D+DNWSD
Sbjct: 419  RQILVWSPSQN-STELDWE------STADKDNWSD 446


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
            gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 479

 Score =  670 bits (1729), Expect = 0.0
 Identities = 325/458 (70%), Positives = 372/458 (81%), Gaps = 1/458 (0%)
 Frame = +2

Query: 215  AREMWKQVGEREVGKLKPHSFANRIKSNRISSLQLSNHKEIVSAHRGAVNSLQVDLTDGR 394
            A +MW+++ +RE GK +P+SF NR+KSNRI++LQLSN+KEIVS HRGA+NSLQVDLT+GR
Sbjct: 30   ASKMWREIRDRESGKTRPNSFTNRVKSNRIANLQLSNYKEIVSPHRGAINSLQVDLTEGR 89

Query: 395  YLLAGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVSSAVWYPIDTG 574
            YL++GASD SAAV+D+Q A  +E  G++AKH+ +F+VDKQHE  HKYAVSSA WYP+DTG
Sbjct: 90   YLISGASDASAAVFDVQRATDFEDEGVIAKHKCLFIVDKQHETAHKYAVSSATWYPVDTG 149

Query: 575  LFVTGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVAKSHMLIATGTEDVQVRLCDI 754
            LFVTGS+DHY+ VWDTNTTQVV+NFK+PGKVYRTAMS +A SHMLIA GTEDVQVRLCDI
Sbjct: 150  LFVTGSYDHYIKVWDTNTTQVVVNFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDI 209

Query: 755  ASGAFTHTLSGHRDGVMTVEWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVG 934
            ASGAF HTLSGHRDGVMTVEWS SSEWVL+TGGCDGAIRFWDIRRAGCF VLDQS+SQ+G
Sbjct: 210  ASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLG 269

Query: 935  RRPPFLLKSSLKGSTSNSIPGSQSSFPKARMLHKKAAYGNGTKHTSTTHKN-KGSTSQRL 1111
            RRPP L +S     +S S+   Q    K+R   KK+A GNG K +       KG   QRL
Sbjct: 270  RRPPVLPRSVANKVSSRSLLAGQHLSSKSRAPLKKSATGNGKKQSPLGRTPVKGPVRQRL 329

Query: 1112 HPGMLSSHDRATAHYGAVIGLKVCEDSMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQ 1291
            HPGMLS  DRATAHYGAV GLK+ ED MYLLSAGSDSR+RLWD+ESGCNTLVNFE  RLQ
Sbjct: 330  HPGMLSIQDRATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDLESGCNTLVNFETVRLQ 389

Query: 1292 TSKGIQLAVTQGSSLVFVPCMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQELYTG 1471
            TSK IQLA TQ SSLVFVPCM+AVKAFD+WSG T +TFRGHYE VNCCW+SSQDQE+YTG
Sbjct: 390  TSKAIQLATTQDSSLVFVPCMTAVKAFDLWSGMTSMTFRGHYEYVNCCWYSSQDQEIYTG 449

Query: 1472 SNDRQILVWSPSRSVHAEVDERGGEALMSTSDQDNWSD 1585
             NDRQILVW P R +  E             DQDNWSD
Sbjct: 450  GNDRQILVWCPPRLIDMETG--------PAEDQDNWSD 479