BLASTX nr result

ID: Coptis24_contig00000456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000456
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854...    99   3e-19
gb|ABB55396.1| unknown [Solanum tuberosum]                             99   4e-19
gb|AFK34834.1| unknown [Lotus japonicus]                               91   1e-16
emb|CBI18930.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|NP_001235579.1| uncharacterized protein LOC100500267 precurs...    91   1e-16

>ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854733 [Vitis vinifera]
          Length = 234

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = -3

Query: 475 DLTTRISFKYGCTRGVYGTPYFFVNGFSLPDAGSAIDYKGWRSILDPLVNSQKQMREETL 296
           DLTTR+SFKYGC+RGV GTPYFFVNGF LPD GSAI+Y  WRSILDPLV+    ++ ETL
Sbjct: 173 DLTTRVSFKYGCSRGVLGTPYFFVNGFPLPDPGSAINYSKWRSILDPLVSD--SVKRETL 230

Query: 295 PFFL 284
            FFL
Sbjct: 231 HFFL 234


>gb|ABB55396.1| unknown [Solanum tuberosum]
          Length = 224

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -3

Query: 475 DLTTRISFKYGCTRGVYGTPYFFVNGFSLPDAGSAIDYKGWRSILDPLVNSQKQMREETL 296
           D  TRISFKYGC +GVYG P+FFVNGF LPD GS +DYK WR ++DPL++ ++Q+R E L
Sbjct: 161 DQATRISFKYGCVKGVYGAPFFFVNGFPLPDGGSPLDYKTWRDVIDPLISPEEQLRAENL 220

Query: 295 PFFL 284
            FFL
Sbjct: 221 NFFL 224


>gb|AFK34834.1| unknown [Lotus japonicus]
          Length = 239

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/65 (63%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
 Frame = -3

Query: 475 DLTTRISFKYGCTRGVYGTPYFFVNGFSLPDAGSAIDYKGWRSILDPLVNSQKQMR-EET 299
           D  TRISFKY  +RGVYGTP+F+VNGF LPD G +IDYK W+ I+DPLV ++K ++ EE+
Sbjct: 175 DHQTRISFKYAASRGVYGTPFFYVNGFLLPDVGDSIDYKTWKKIIDPLVGAEKNVKNEES 234

Query: 298 LPFFL 284
           L FFL
Sbjct: 235 LHFFL 239


>emb|CBI18930.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -3

Query: 475 DLTTRISFKYGCTRGVYGTPYFFVNGFSLPDAGSAIDYKGWRSILDPL 332
           DLTTR+SFKYGC+RGV GTPYFFVNGF LPD GSAI+Y  WRSILDPL
Sbjct: 173 DLTTRVSFKYGCSRGVLGTPYFFVNGFPLPDPGSAINYSKWRSILDPL 220


>ref|NP_001235579.1| uncharacterized protein LOC100500267 precursor [Glycine max]
           gi|255629877|gb|ACU15289.1| unknown [Glycine max]
          Length = 236

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = -3

Query: 475 DLTTRISFKYGCTRGVYGTPYFFVNGFSLPDAGSAIDYKGWRSILDPLV---NSQKQMRE 305
           D+ TR+SFKY  +RGVYGTP+F+VNGF LPD G+A+DYK WR ++DPLV   N +    E
Sbjct: 170 DIQTRVSFKYAASRGVYGTPFFYVNGFLLPDTGAAVDYKTWRKVIDPLVGAKNKKSIQNE 229

Query: 304 ETLPFFL 284
           E+L FFL
Sbjct: 230 ESLHFFL 236


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