BLASTX nr result
ID: Coptis24_contig00000447
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000447 (1242 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527636.1| conserved hypothetical protein [Ricinus comm... 318 2e-84 ref|XP_002326503.1| predicted protein [Populus trichocarpa] gi|2... 318 2e-84 gb|ABK92751.1| unknown [Populus trichocarpa] 317 5e-84 gb|ACU24289.1| unknown [Glycine max] 313 4e-83 gb|AFK40219.1| unknown [Lotus japonicus] 313 8e-83 >ref|XP_002527636.1| conserved hypothetical protein [Ricinus communis] gi|223532941|gb|EEF34707.1| conserved hypothetical protein [Ricinus communis] Length = 280 Score = 318 bits (815), Expect = 2e-84 Identities = 158/282 (56%), Positives = 188/282 (66%) Frame = +2 Query: 179 MSCKGCXXXXXXXXXXXXXXXXXGMIGYGIYLFVEWKRFEDHHQIDISPSVDDGHQFLQL 358 M+C+GC M+GYGIYLFVE+ R + ++P+ +D +QL Sbjct: 1 MACRGCLECILKLLNLLLTLVGLAMVGYGIYLFVEYTRAAGGDTL-LAPATNDS-SLIQL 58 Query: 359 GRPMLLLVSLSNTILDKLPKAWFIYLFFGIGVILVFISLFGCIGALTRXXXXXXXXXXXX 538 GRPML+ VSLS++++DKLPKAWFIYLF G+G+IL IS FGCIG++TR Sbjct: 59 GRPMLMAVSLSDSLVDKLPKAWFIYLFIGVGLILFVISCFGCIGSVTRNGCCLSCYSVLV 118 Query: 539 XXXXXXXXXXXXFIFFDKSWKDEIPTDKTGDFEMIYSFLKENWKIAKWVALGXXXXXXXX 718 FIFFDKSWK+EIPTDKTGDF+MIY FLKE WKI +WVALG Sbjct: 119 ILLILIELGCAAFIFFDKSWKEEIPTDKTGDFDMIYDFLKEKWKIVRWVALGVVILEALL 178 Query: 719 XXXXXXXXXXNRPANYDSDEEYLLSRSQVRQPLINRQGAPATGVPVAGTLDQRPGRNDAW 898 NRPA YDSD+E + R Q+RQPL+NR PATGVPVAGTLDQRP RNDAW Sbjct: 179 FVLALIVRAANRPAEYDSDDELIAPRQQIRQPLLNRPPGPATGVPVAGTLDQRPSRNDAW 238 Query: 899 SARMREKYGLDTSEFTYNPSESNRYQQTAPQPTEERGRCTIM 1024 S RMREKYGLDTSEF+YNPSES+R+QQ + QPTEER RCTIM Sbjct: 239 STRMREKYGLDTSEFSYNPSESHRFQQVSTQPTEERSRCTIM 280 >ref|XP_002326503.1| predicted protein [Populus trichocarpa] gi|222833825|gb|EEE72302.1| predicted protein [Populus trichocarpa] Length = 280 Score = 318 bits (814), Expect = 2e-84 Identities = 161/282 (57%), Positives = 183/282 (64%) Frame = +2 Query: 179 MSCKGCXXXXXXXXXXXXXXXXXGMIGYGIYLFVEWKRFEDHHQIDISPSVDDGHQFLQL 358 M+CKGC MIGYGIYLFVE++R +D+ + +PS DG L Sbjct: 1 MACKGCLECLLKLLNFLLTLVGLAMIGYGIYLFVEYRRADDNVGLVSTPS--DGQGLTLL 58 Query: 359 GRPMLLLVSLSNTILDKLPKAWFIYLFFGIGVILVFISLFGCIGALTRXXXXXXXXXXXX 538 GRPML+ VSLS +ILDKLPKAWFIYLF +GVIL IS FGCIGA TR Sbjct: 59 GRPMLIAVSLSESILDKLPKAWFIYLFIAVGVILFVISCFGCIGAATRNGCCLTCYSVLI 118 Query: 539 XXXXXXXXXXXXFIFFDKSWKDEIPTDKTGDFEMIYSFLKENWKIAKWVALGXXXXXXXX 718 FIFFDKSWK+ +PTDK+GDF+MIY FLKENW I +WVALG Sbjct: 119 ILLILVELGCAAFIFFDKSWKEVLPTDKSGDFDMIYKFLKENWNIVRWVALGIVILEALI 178 Query: 719 XXXXXXXXXXNRPANYDSDEEYLLSRSQVRQPLINRQGAPATGVPVAGTLDQRPGRNDAW 898 NRP YDSD+E++ SR Q RQPL+NR APA GVPV+GTLDQRPGRNDAW Sbjct: 179 FLLTLVVRAANRPVEYDSDDEFIASRQQTRQPLLNRPPAPAAGVPVSGTLDQRPGRNDAW 238 Query: 899 SARMREKYGLDTSEFTYNPSESNRYQQTAPQPTEERGRCTIM 1024 S RMREKYGLDTSEF+YNPSE +R Q A QPTEER RCTIM Sbjct: 239 STRMREKYGLDTSEFSYNPSEPHRLQPAAAQPTEERSRCTIM 280 >gb|ABK92751.1| unknown [Populus trichocarpa] Length = 280 Score = 317 bits (811), Expect = 5e-84 Identities = 159/282 (56%), Positives = 182/282 (64%) Frame = +2 Query: 179 MSCKGCXXXXXXXXXXXXXXXXXGMIGYGIYLFVEWKRFEDHHQIDISPSVDDGHQFLQL 358 M+CKGC M+G+GIYLFVE+ R +D+ + + ++ DG QL Sbjct: 1 MACKGCLECLLKLLNFLLTLVGLAMVGFGIYLFVEYTRADDN--VALVSTLSDGQGLTQL 58 Query: 359 GRPMLLLVSLSNTILDKLPKAWFIYLFFGIGVILVFISLFGCIGALTRXXXXXXXXXXXX 538 GRPML+ +SLS+ ILDKLPKAWFIYLF +GVIL IS FGCIGA TR Sbjct: 59 GRPMLMTMSLSDNILDKLPKAWFIYLFVAVGVILFIISCFGCIGAATRNGCCLTCYSVLI 118 Query: 539 XXXXXXXXXXXXFIFFDKSWKDEIPTDKTGDFEMIYSFLKENWKIAKWVALGXXXXXXXX 718 FIFFDKSWK+EIPTDKTGDF+M+Y FLKE W I KWVALG Sbjct: 119 VLLILVELGCAAFIFFDKSWKEEIPTDKTGDFDMLYDFLKEKWNIVKWVALGIVILEALI 178 Query: 719 XXXXXXXXXXNRPANYDSDEEYLLSRSQVRQPLINRQGAPATGVPVAGTLDQRPGRNDAW 898 NRP YDSD+E + R Q RQPL+NR APATGVPVAGTLDQRP RNDAW Sbjct: 179 FLLALLVRAANRPVEYDSDDELIAPRQQNRQPLLNRPPAPATGVPVAGTLDQRPSRNDAW 238 Query: 899 SARMREKYGLDTSEFTYNPSESNRYQQTAPQPTEERGRCTIM 1024 S RMREKYGLDTSEFTYNPSE +R+Q + QPTEER RCTIM Sbjct: 239 STRMREKYGLDTSEFTYNPSEPHRFQPVSAQPTEERSRCTIM 280 >gb|ACU24289.1| unknown [Glycine max] Length = 283 Score = 313 bits (803), Expect = 4e-83 Identities = 158/283 (55%), Positives = 179/283 (63%), Gaps = 1/283 (0%) Frame = +2 Query: 179 MSCKGCXXXXXXXXXXXXXXXXXGMIGYGIYLFVEWKRFEDHHQIDISPSVDDGHQFLQL 358 M+C+GC ++GYGIYLFVE+ + D V D +QL Sbjct: 1 MACRGCWECLLKLFNFILTLTGLAIVGYGIYLFVEFSKASDDDNTPAISPVSDDSALIQL 60 Query: 359 GRPMLLLVSLSNTILDKLPKAWFIYLFFGIGVILVFISLFGCIGALTRXXXXXXXXXXXX 538 GRP+L+ VSLSN D LP+AWFIYLF GIGV+L IS FGCIGA TR Sbjct: 61 GRPVLMAVSLSNDFFDNLPRAWFIYLFIGIGVVLFLISCFGCIGAATRNGCCLSCYSILV 120 Query: 539 XXXXXXXXXXXXFIFFDKSWKDEIPTDKTGDFEMIYSFLKENWKIAKWVALGXXXXXXXX 718 FIFFDK+WK+EIPTDKTGDF+ IY FL ENW I KWVALG Sbjct: 121 ALLILVELGCAAFIFFDKNWKEEIPTDKTGDFDAIYGFLIENWNIVKWVALGIVIFEALL 180 Query: 719 XXXXXXXXXXNRPANYDSDEEYLLSRSQVRQPLINRQGA-PATGVPVAGTLDQRPGRNDA 895 NRPA+YDSDEE + R QVRQPL+NR A PATG+PVAGT+DQRPGRNDA Sbjct: 181 FLLALIVRAANRPADYDSDEELINPRQQVRQPLLNRPAASPATGLPVAGTMDQRPGRNDA 240 Query: 896 WSARMREKYGLDTSEFTYNPSESNRYQQTAPQPTEERGRCTIM 1024 WS RMREKYGLDTSEFTYNPSESNR+QQ QPTEE+ RCTIM Sbjct: 241 WSTRMREKYGLDTSEFTYNPSESNRFQQVNSQPTEEKSRCTIM 283 >gb|AFK40219.1| unknown [Lotus japonicus] Length = 282 Score = 313 bits (801), Expect = 8e-83 Identities = 157/281 (55%), Positives = 182/281 (64%) Frame = +2 Query: 182 SCKGCXXXXXXXXXXXXXXXXXGMIGYGIYLFVEWKRFEDHHQIDISPSVDDGHQFLQLG 361 +C+GC M+GYGIYL VE+ + D+ + +S +V D +QLG Sbjct: 4 ACRGCWECLLKLLNFLLTLVGLAMVGYGIYLLVEFSKASDN-TLSVS-TVSDDQTLVQLG 61 Query: 362 RPMLLLVSLSNTILDKLPKAWFIYLFFGIGVILVFISLFGCIGALTRXXXXXXXXXXXXX 541 RPML+ VSLSN+ D LPKAWFIYLF GIGV+L IS FGCIGA+TR Sbjct: 62 RPMLMAVSLSNSFFDDLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAVLVV 121 Query: 542 XXXXXXXXXXXFIFFDKSWKDEIPTDKTGDFEMIYSFLKENWKIAKWVALGXXXXXXXXX 721 FIFFDKSWK EIPTDKTG+F+MIY FL+ENW I +WVALG Sbjct: 122 LLILAELGCAAFIFFDKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLF 181 Query: 722 XXXXXXXXXNRPANYDSDEEYLLSRSQVRQPLINRQGAPATGVPVAGTLDQRPGRNDAWS 901 NRPA+YDSDEE++ R Q RQPL+NR APA+GVPVAGT+DQRP RNDAWS Sbjct: 182 VLALIVRAANRPADYDSDEEFINPRQQARQPLLNRPAAPASGVPVAGTIDQRPSRNDAWS 241 Query: 902 ARMREKYGLDTSEFTYNPSESNRYQQTAPQPTEERGRCTIM 1024 RMREKYGLDTSEFTYNPSES R+QQ QPTEER RC IM Sbjct: 242 TRMREKYGLDTSEFTYNPSESQRFQQVNSQPTEERSRCAIM 282