BLASTX nr result
ID: Coptis24_contig00000446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000446
(1988 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36835.3| unnamed protein product [Vitis vinifera] 243 2e-61
ref|XP_002267361.2| PREDICTED: uncharacterized protein LOC100260... 233 2e-58
ref|XP_004136037.1| PREDICTED: uncharacterized protein LOC101211... 224 7e-56
ref|XP_003591556.1| Katanin p60 ATPase-containing subunit A-like... 224 9e-56
ref|XP_002321014.1| predicted protein [Populus trichocarpa] gi|2... 222 3e-55
>emb|CBI36835.3| unnamed protein product [Vitis vinifera]
Length = 1287
Score = 243 bits (619), Expect = 2e-61
Identities = 138/253 (54%), Positives = 175/253 (69%), Gaps = 10/253 (3%)
Frame = +1
Query: 1252 IGRIPGINYEFKPYMPMFP-RSPSDFELDGSMFRTVDEQRENSDLDK------SIPSSRC 1410
IG++PG YE +P + M S SDF+L GS+ + ++EQRE ++ K ++ S+R
Sbjct: 377 IGKVPGATYELRPLLRMLAGSSSSDFDLSGSISKILEEQREIREILKDLEPPMALTSTRR 436
Query: 1411 EAFQDHLKEKILFPSDIEVSFDDFPYYLSDSTKNVLIASTYVHFKCPKFATNALDLPTVS 1590
+AF+D L+E IL DIEVSF+ FPYYLSD+TKNVLI STY+H KFA +DL +V
Sbjct: 437 QAFKDSLQEGILSSDDIEVSFESFPYYLSDTTKNVLITSTYIHLMHIKFAKYTMDLSSVC 496
Query: 1591 SRILLCGPSGSEIYQETLTKALAKYFGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKSG 1770
RILL GP+GSEIYQETLTKALAK+F ARLLIVDSLLLPG KD KE+ E++
Sbjct: 497 PRILLSGPAGSEIYQETLTKALAKHFTARLLIVDSLLLPGGSTPKDPDPVKENTRGERAS 556
Query: 1771 SFSK---QRFASQQKKQASSVEADIVGSSTLNPQGLPKQETSTASSNNHTPKTGDRVKYM 1941
F+K Q Q KK ASSVEADI G+ST++ + LPKQETSTA+S N+ K GDRVK++
Sbjct: 557 IFAKRAAQAAVLQHKKPASSVEADITGASTVSSRALPKQETSTATSKNYIFKAGDRVKFV 616
Query: 1942 GNIHPCGFPPLQP 1980
G P GF P+ P
Sbjct: 617 GP-PPSGFSPMPP 628
Score = 166 bits (421), Expect = 2e-38
Identities = 95/196 (48%), Positives = 127/196 (64%), Gaps = 9/196 (4%)
Frame = +2
Query: 551 WGKLVPRSSQHPPRLLCGSIFSVGRSAQCNLRMKDPSVSNVLCKLSHIESQGSSSALLKI 730
WGKL+ + SQ+P + LCG +F++G+S NL ++DPS+SN LC+L HIE G+S LL+I
Sbjct: 141 WGKLLSQCSQYPHQPLCGPLFTIGQSRASNLSLRDPSISNTLCRLRHIERGGASVVLLEI 200
Query: 731 TGSKGDVKVNGKNLEKNLDVCLQEGDEVVFDSFGKHAYIFQKLASQLPTLGGP----SVG 898
TG KG V+VNGK +K+ + + GDE+VF + G+ AYIFQ+ S L P SV
Sbjct: 201 TGGKGVVQVNGKIHQKSSTLIISGGDELVFSASGQPAYIFQQFTSD--NLAAPVIPSSVS 258
Query: 899 ITESHSASVKGTYLKSRSGDSSSVAGASILASLSTHRKDLPFLTP-----SAKSGGERPP 1063
I E+ SA VKG ++++RSGD S+VAGASILASLS RKDL L P + G E
Sbjct: 259 ILEAQSAPVKGIHVEARSGDPSAVAGASILASLSNLRKDLSLLPPPKSGEDVQQGTEMTT 318
Query: 1064 LPLRCEISESSMPDLD 1111
P C S+S +PD D
Sbjct: 319 PP--CGASDSCIPDAD 332
>ref|XP_002267361.2| PREDICTED: uncharacterized protein LOC100260666 [Vitis vinifera]
Length = 1258
Score = 233 bits (593), Expect = 2e-58
Identities = 136/253 (53%), Positives = 173/253 (68%), Gaps = 10/253 (3%)
Frame = +1
Query: 1252 IGRIPGINYEFKPYMPMFP-RSPSDFELDGSMFRTVDEQRENSDLDK------SIPSSRC 1410
IG++PG YE +P + M S SDF+L GS+ + ++EQRE ++ K ++ S+R
Sbjct: 377 IGKVPGATYELRPLLRMLAGSSSSDFDLSGSISKILEEQREIREILKDLEPPMALTSTRR 436
Query: 1411 EAFQDHLKEKILFPSDIEVSFDDFPYYLSDSTKNVLIASTYVHFKCPKFATNALDLPTVS 1590
+AF+D L+E IL DIEVSF+ FPYYLSD+TKNVLI STY+H KFA +DL +V
Sbjct: 437 QAFKDSLQEGILSSDDIEVSFESFPYYLSDTTKNVLITSTYIHLMHIKFAKYTMDLSSVC 496
Query: 1591 SRILLCGPSGSEIYQETLTKALAKYFGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKSG 1770
RILL GP+GSEIYQETLTKALAK+F ARLLIVDSLLLPG KD KE+ E++
Sbjct: 497 PRILLSGPAGSEIYQETLTKALAKHFTARLLIVDSLLLPGGSTPKDPDPVKENTRGERAS 556
Query: 1771 SFSK---QRFASQQKKQASSVEADIVGSSTLNPQGLPKQETSTASSNNHTPKTGDRVKYM 1941
F+K Q Q KK ASSVEADI G+ST++ + LPKQETSTA+S N+ K G VK++
Sbjct: 557 IFAKRAAQAAVLQHKKPASSVEADITGASTVSSRALPKQETSTATSKNYIFKAG-IVKFV 615
Query: 1942 GNIHPCGFPPLQP 1980
G P GF P+ P
Sbjct: 616 GP-PPSGFSPMPP 627
Score = 166 bits (421), Expect = 2e-38
Identities = 95/196 (48%), Positives = 127/196 (64%), Gaps = 9/196 (4%)
Frame = +2
Query: 551 WGKLVPRSSQHPPRLLCGSIFSVGRSAQCNLRMKDPSVSNVLCKLSHIESQGSSSALLKI 730
WGKL+ + SQ+P + LCG +F++G+S NL ++DPS+SN LC+L HIE G+S LL+I
Sbjct: 141 WGKLLSQCSQYPHQPLCGPLFTIGQSRASNLSLRDPSISNTLCRLRHIERGGASVVLLEI 200
Query: 731 TGSKGDVKVNGKNLEKNLDVCLQEGDEVVFDSFGKHAYIFQKLASQLPTLGGP----SVG 898
TG KG V+VNGK +K+ + + GDE+VF + G+ AYIFQ+ S L P SV
Sbjct: 201 TGGKGVVQVNGKIHQKSSTLIISGGDELVFSASGQPAYIFQQFTSD--NLAAPVIPSSVS 258
Query: 899 ITESHSASVKGTYLKSRSGDSSSVAGASILASLSTHRKDLPFLTP-----SAKSGGERPP 1063
I E+ SA VKG ++++RSGD S+VAGASILASLS RKDL L P + G E
Sbjct: 259 ILEAQSAPVKGIHVEARSGDPSAVAGASILASLSNLRKDLSLLPPPKSGEDVQQGTEMTT 318
Query: 1064 LPLRCEISESSMPDLD 1111
P C S+S +PD D
Sbjct: 319 PP--CGASDSCIPDAD 332
>ref|XP_004136037.1| PREDICTED: uncharacterized protein LOC101211144 [Cucumis sativus]
Length = 1270
Score = 224 bits (571), Expect = 7e-56
Identities = 129/257 (50%), Positives = 171/257 (66%), Gaps = 15/257 (5%)
Frame = +1
Query: 1252 IGRIPGINYEFKPYMPMFPRSPS-DFELDG-SMFRTVDEQRENSDLDKS------IPSSR 1407
+G P + E +P + + S S DF ++G S+ + ++EQR+ +L K + S+R
Sbjct: 379 VGEAPAKHSELRPLLQILASSASPDFNINGGSISKILNEQRDMGNLFKDFSPPAVLMSTR 438
Query: 1408 CEAFQDHLKEKILFPSDIEVSFDDFPYYLSDSTKNVLIASTYVHFKCPKFATNALDLPTV 1587
+AF++ L++ IL P +I+VS + FPYYLSD+TKNVLIAS +VH KC KF +A DLP +
Sbjct: 439 RQAFKERLQQGILKPDNIDVSLESFPYYLSDTTKNVLIASMFVHLKCNKFVKHASDLPIL 498
Query: 1588 SSRILLCGPSGSEIYQETLTKALAKYFGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKS 1767
S RILL GP+GSEIYQETLTKALA++FGARLLIVDSLLLPG KD K++ +++
Sbjct: 499 SPRILLSGPAGSEIYQETLTKALARHFGARLLIVDSLLLPGGPTPKDVDIVKDNSRPDRT 558
Query: 1768 GSFSKQRF-------ASQQKKQASSVEADIVGSSTLNPQGLPKQETSTASSNNHTPKTGD 1926
F+K+ SQ KK SSVEADI G STL+ Q LPKQE STASS KTGD
Sbjct: 559 SFFAKRAVQAAAAAAVSQNKKPTSSVEADIAGGSTLSSQALPKQEASTASSKTTAFKTGD 618
Query: 1927 RVKYMGNIHPCGFPPLQ 1977
+VK++G + PPLQ
Sbjct: 619 KVKFVGTLSSTLSPPLQ 635
Score = 193 bits (491), Expect = 1e-46
Identities = 129/306 (42%), Positives = 167/306 (54%), Gaps = 15/306 (4%)
Frame = +2
Query: 233 NGKRPKVEELSQSINEVEAT---SPLVPDDQIVVXXXXXXXXXXXXDHVKESDMKIGDL- 400
N KR KV E S S +V++ PL+P + V D +K+ ++
Sbjct: 28 NSKRSKVVEASSSTEDVQSAPPVDPLIPVGESGVEPVDPVIQSA--DPFDTDSLKVNNVC 85
Query: 401 -----ENGSDIS---NXXXXXXXXXXXXXXXXRNKEIVIERQKRTLRACKEM-KRQMKP- 550
EN D+ ++K +V RT + M K KP
Sbjct: 86 DEAVPENSHDLQAEGQAIMPPQPLGDVAADAEKSKAVVASMLNRTKKRTMRMPKSNSKPA 145
Query: 551 WGKLVPRSSQHPPRLLCGSIFSVGRSAQCNLRMKDPSVSNVLCKLSHIESQGSSSALLKI 730
WGKL+ + SQ+P +CG++F+VG+S QCNL +KDPSVS LCKL HI+ SS ALL+I
Sbjct: 146 WGKLLSQCSQNPHLFICGTLFTVGQSRQCNLWLKDPSVSTTLCKLRHIKRGNSSVALLEI 205
Query: 731 TGSKGDVKVNGKNLEKNLDVCLQEGDEVVFDSFGKHAYIFQKLASQLPTLGG-PSVGITE 907
TG KG V VNGK ++KN V L GDEVVF S GKHAYIFQ+L S T+ G SV I E
Sbjct: 206 TGGKGAVIVNGKIVQKNSSVILNGGDEVVFTSSGKHAYIFQQLTSDDFTVSGLSSVNILE 265
Query: 908 SHSASVKGTYLKSRSGDSSSVAGASILASLSTHRKDLPFLTPSAKSGGERPPLPLRCEIS 1087
+H A VKG + + RS D+S+V GASILAS S +KDL L+P AK+ E LP C +S
Sbjct: 266 AHCAPVKGIHFERRSRDASAVTGASILASFSNIQKDLSLLSPPAKT-NEDVKLPSVCGVS 324
Query: 1088 ESSMPD 1105
PD
Sbjct: 325 GEQSPD 330
>ref|XP_003591556.1| Katanin p60 ATPase-containing subunit A-like protein [Medicago
truncatula] gi|355480604|gb|AES61807.1| Katanin p60
ATPase-containing subunit A-like protein [Medicago
truncatula]
Length = 1242
Score = 224 bits (570), Expect = 9e-56
Identities = 121/240 (50%), Positives = 163/240 (67%), Gaps = 5/240 (2%)
Frame = +1
Query: 1252 IGRIPGINYEFKPYMPMFPRSPSDFELDGSMFRTVDEQRENSDLDKS--IPSSRCEAFQD 1425
+G++ NYE +P + M S ++F+L GS+ + +++QRE +LD + S+R +AF+D
Sbjct: 364 VGKMANANYELRPLLCMLTGSGTEFDLSGSIHKILEDQRELRELDTPTILASTRRQAFRD 423
Query: 1426 HLKEKILFPSDIEVSFDDFPYYLSDSTKNVLIASTYVHFKCPKFATNALDLPTVSSRILL 1605
L+++IL DI+VSF+ FPYYLSD+TKNVL+ASTY+H KC A D ++ RILL
Sbjct: 424 SLEQRILKADDIDVSFETFPYYLSDTTKNVLVASTYIHLKCNGIGKYASDFSSLCPRILL 483
Query: 1606 CGPSGSEIYQETLTKALAKYFGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKSGSFSK- 1782
GPSGSEIYQETL+KALAK+FGARLLIVDSL LPG +K+ S+KE E+ +K
Sbjct: 484 SGPSGSEIYQETLSKALAKHFGARLLIVDSLSLPGGTPSKEVDSAKESSKPERPAVLAKR 543
Query: 1783 --QRFASQQKKQASSVEADIVGSSTLNPQGLPKQETSTASSNNHTPKTGDRVKYMGNIHP 1956
Q KK SSV+A+I+G STL+ Q + KQE STASS K GDRVK++GN P
Sbjct: 544 SGQASTLHHKKPTSSVDAEIIGGSTLSSQAMLKQEVSTASSKGTALKKGDRVKFVGNFPP 603
Score = 159 bits (403), Expect = 2e-36
Identities = 91/185 (49%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Frame = +2
Query: 503 KRTLRACKEMKRQMKPWGKLVPRSSQHPPRLLCGSIFSVGRSAQCNLRMKDPSVSNVLCK 682
+R R+ ++ + WGKL+ +SSQ+P + IF+VG+ Q NL +KDP++ NVLCK
Sbjct: 112 RRKPRSVAKLIAKPAAWGKLISQSSQNPHLSISDPIFTVGQGRQSNLVLKDPTIGNVLCK 171
Query: 683 LSHIESQGSSSALLKITGSKGDVKVNGKNLEKNLDVCLQEGDEVVFDSFGKH--AYIFQK 856
LSHIE GSS ALL+ITG KG V+VNGK + + L GDEV+F + GKH IFQ
Sbjct: 172 LSHIEG-GSSVALLEITGGKGVVQVNGKTFRRTTKMILNGGDEVIFGASGKHHETQIFQL 230
Query: 857 LASQLPTLGG--PSVGITESHSASVKGTYLKSRSGDSSSVAGASILASLSTHRKDLPFLT 1030
L S + G PSV I E+ SA++ G +++RSGD S+V GASILASLS RKDL ++
Sbjct: 231 LKSNNVSTAGTPPSVSILEAQSAALNGMQVEARSGDPSAVTGASILASLSNIRKDLSLIS 290
Query: 1031 PSAKS 1045
P AK+
Sbjct: 291 PPAKT 295
>ref|XP_002321014.1| predicted protein [Populus trichocarpa] gi|222861787|gb|EEE99329.1|
predicted protein [Populus trichocarpa]
Length = 1231
Score = 222 bits (565), Expect = 3e-55
Identities = 131/248 (52%), Positives = 163/248 (65%), Gaps = 5/248 (2%)
Frame = +1
Query: 1252 IGRIPGINYEFKPYMPMFPRSPSDFELDGSMFRTVDEQRENSDLDKS--IPSSRCEAFQD 1425
IGRIP YE KP + M S S+ + +F + + DLD + S+R + F+D
Sbjct: 360 IGRIPNSTYELKPLLRMLAGSSSELD---KIFDERERREILKDLDPPPVLMSTRRQLFKD 416
Query: 1426 HLKEKILFPSDIEVSFDDFPYYLSDSTKNVLIASTYVHFKCP-KFATNALDLPTVSSRIL 1602
L++ IL P +IEVSFD FPYYLSD+TK VLI++ ++H KC K A A DLPTVS R+L
Sbjct: 417 SLQKGILNPEEIEVSFDSFPYYLSDTTKKVLISAAFIHLKCGNKVAKFACDLPTVSPRML 476
Query: 1603 LCGPSGSEIYQETLTKALAKYFGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKSGSFSK 1782
L GP+GSEIYQETLTKALAK GARLLIVDSL LPG + K++ SS+E E+ F+K
Sbjct: 477 LSGPAGSEIYQETLTKALAKDVGARLLIVDSLQLPGGSIPKEADSSRESSKSERVSVFAK 536
Query: 1783 Q--RFASQQKKQASSVEADIVGSSTLNPQGLPKQETSTASSNNHTPKTGDRVKYMGNIHP 1956
+ + A Q KK SSVEADI G ST + PKQETSTASS N+T KTGDRVK++G
Sbjct: 537 RAVQAALQSKKPTSSVEADITGCSTFSSHARPKQETSTASSKNYTFKTGDRVKFVGASLA 596
Query: 1957 CGFPPLQP 1980
LQP
Sbjct: 597 SAISSLQP 604
Score = 177 bits (449), Expect = 9e-42
Identities = 103/217 (47%), Positives = 140/217 (64%), Gaps = 8/217 (3%)
Frame = +2
Query: 485 IVIERQKRTLRACKEMKRQMKP-WGKLVPRSSQHPPRLLCGSIFSVGRSAQCNLRMKDPS 661
+++ + K+ R K +K K WG+L+ + SQ+P +L+ ++FSVG+S QCNL + DPS
Sbjct: 106 VLLNKSKK--RVPKSVKSSAKAAWGQLLSQCSQNPHKLMNSTLFSVGQSRQCNLWLNDPS 163
Query: 662 VSNVLCKLSHIESQGSSSALLKITGSKGDVKVNGKNLEKNLDVCLQEGDEVVFDSFGKHA 841
+S VLCKL HIE G+S LL+ITG KG V+VNGK +KN + L GDEV+F + GKHA
Sbjct: 164 ISTVLCKLKHIERGGASVVLLEITGGKGAVQVNGKLYQKNESLVLNGGDEVIFTTSGKHA 223
Query: 842 YIFQKLAS-QLPTLGGPSVGITESHSASVKGTYLKSRSGDSSSVAGASILASLSTHRKDL 1018
YIFQ+L S L T G PSV I E+ SA +KG ++++R D S AGASILASLS
Sbjct: 224 YIFQQLTSNNLGTPGMPSVSILEAQSAPIKGIHIEARPRDPSDYAGASILASLS------ 277
Query: 1019 PFLTPSAKSGGERPP------LPLRCEISESSMPDLD 1111
L P+AK+G + LP CE SE +PD++
Sbjct: 278 HLLPPAAKTGEDTQQNTDFSILPSGCEASEDRIPDVE 314