BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000444
         (2971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|2...   477   e-135
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              466   e-133
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   463   e-132
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   458   e-130
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   457   e-130

>ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|222851845|gb|EEE89392.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  477 bits (1228), Expect(2) = e-135
 Identities = 236/342 (69%), Positives = 275/342 (80%), Gaps = 1/342 (0%)
 Frame = -3

Query: 2021 SLINFYSTKYSNSAPPHGWQQRIRNGQITFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDA 1842
            +LI+FYS+KY NSAP  GW QRI NGQIT DGEVV +P   LR G  LVYHRLPW+EPDA
Sbjct: 40   TLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGEVVKEPKAILRDGMELVYHRLPWREPDA 99

Query: 1841 PYLLQVLFEDDDLVALNKPSGLQVLPGGSFQQRTVLTQLQWRVKKQRSQRLAGNGALCGR 1662
            PYLLQVL+EDDD+VALNKP GLQVLPGG FQQRTVL QLQWR  K       G+ +L  +
Sbjct: 100  PYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQRTVLMQLQWRASK-------GSSSLAIQ 152

Query: 1661 DSNPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFAYGTSVVGDKRITNLELNTTRKISKI 1482
             S+PVPVHRLGRGTSGILLCAKTK+AK  LAAYFA GTS++GD    N+E +  RKISKI
Sbjct: 153  GSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSLIGDSSNANMEQSKRRKISKI 212

Query: 1481 YRALVTEIIEENQVVISQPIGVIQYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLV 1302
            YRALV  I+ +++++I QPIG ++YPGVA GLYVA  SGKPALSKV+VLER+ + N +LV
Sbjct: 213  YRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGKPALSKVEVLERDSQLNQTLV 272

Query: 1301 QVEIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAHDGGYQRPMKPV 1122
            QVEI++GRPHQIRIHLSF+GHPLLGDPLY  GG P CFD E    S A DGGY+RP KPV
Sbjct: 273  QVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDSEHEDESFAEDGGYERPAKPV 332

Query: 1121 PGDCGYYLHAYRLVLDHPTTNE-ALEITAPLPSILKTQEESQ 999
            PGDCGYYLHA++LVL HPT NE  ++ITAPLPSIL+TQ E++
Sbjct: 333  PGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQAETE 374



 Score = 33.9 bits (76), Expect(2) = e-135
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 2206 NPSRS-VETFGEAWPDFNEGLTYTDILKHPSSN 2111
            N SRS + +FG  WPD NEGL Y D++   S +
Sbjct: 5    NNSRSPLCSFGSPWPDLNEGLFYNDVVSTSSDS 37


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  466 bits (1199), Expect(2) = e-133
 Identities = 228/322 (70%), Positives = 266/322 (82%)
 Frame = -3

Query: 2021 SLINFYSTKYSNSAPPHGWQQRIRNGQITFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDA 1842
            +LI++YS+K+ NSAP  GW QRI  GQIT DG VVT+P T LRAGS LVYHRLPW+EPDA
Sbjct: 30   TLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTVVTEPKTILRAGSKLVYHRLPWQEPDA 89

Query: 1841 PYLLQVLFEDDDLVALNKPSGLQVLPGGSFQQRTVLTQLQWRVKKQRSQRLAGNGALCGR 1662
            PYLL++L+EDDD++ALNKPSGLQVLPGG FQQRTVLTQLQWR  KQ S           +
Sbjct: 90   PYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQLQWRANKQNSLPAC-------Q 142

Query: 1661 DSNPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFAYGTSVVGDKRITNLELNTTRKISKI 1482
            +S+ VPVHRLGRGTSGILLCAKTKLAK RLAAYFA GTSVVG  R  +++  T RKISKI
Sbjct: 143  ESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNRDADMKSRTMRKISKI 202

Query: 1481 YRALVTEIIEENQVVISQPIGVIQYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLV 1302
            YRALV  I++++++VI QPIG++QYPGVA GLYVA  SGKPALSKV +LER+V+ +H +V
Sbjct: 203  YRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPALSKVSILERDVQGDHMIV 262

Query: 1301 QVEIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAHDGGYQRPMKPV 1122
            QVEIQ+GRPHQIRIHLSF+GHPLLGDPLYV GG P C D E +  S A DGGYQRP+KPV
Sbjct: 263  QVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGGYQRPVKPV 322

Query: 1121 PGDCGYYLHAYRLVLDHPTTNE 1056
            PGDCGY+LHA++LVL HPTTNE
Sbjct: 323  PGDCGYHLHAHQLVLSHPTTNE 344



 Score = 37.7 bits (86), Expect(2) = e-133
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 2188 ETFGEAWPDFNEGLTYTDILKHPSS 2114
            +TFG  WPDFN+GLTY D++    S
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVSASDS 27


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  463 bits (1192), Expect(2) = e-132
 Identities = 228/323 (70%), Positives = 267/323 (82%), Gaps = 1/323 (0%)
 Frame = -3

Query: 2021 SLINFYSTKYSNSAPPHGWQQRIRNGQITFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDA 1842
            +LI++YS+K+ NSAP  GW QRI  GQIT DG VVT+P T LRAGS LVYHRLPW+EPDA
Sbjct: 30   TLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTVVTEPKTILRAGSKLVYHRLPWQEPDA 89

Query: 1841 PYLLQVLFEDDDLVALNKPSGLQVLPGGSFQQRTVLTQLQWRVKKQRSQRLAGNGALCGR 1662
            PYLL++L+EDDD++ALNKPSGLQVLPGG FQQRTVLTQLQWR  KQ S           +
Sbjct: 90   PYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQLQWRANKQNSLPAC-------Q 142

Query: 1661 DSNPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFAYGTSVVGDKRI-TNLELNTTRKISK 1485
            +S+ VPVHRLGRGTSGILLCAKTKLAK RLAAYFA GTSVVG  R+  +++  T RKISK
Sbjct: 143  ESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNRLDADMKSRTMRKISK 202

Query: 1484 IYRALVTEIIEENQVVISQPIGVIQYPGVANGLYVALSSGKPALSKVKVLERNVEENHSL 1305
            IYRALV  I++++++VI QPIG++QYPGVA GLYVA  SGKPALSKV +LER+V+ +H +
Sbjct: 203  IYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPALSKVSILERDVQGDHMI 262

Query: 1304 VQVEIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAHDGGYQRPMKP 1125
            VQVEIQ+GRPHQIRIHLSF+GHPLLGDPLYV GG P C D E +  S A DGGYQRP+KP
Sbjct: 263  VQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGGYQRPVKP 322

Query: 1124 VPGDCGYYLHAYRLVLDHPTTNE 1056
            VPGDCGY+LHA++LVL HPTTNE
Sbjct: 323  VPGDCGYHLHAHQLVLSHPTTNE 345



 Score = 37.7 bits (86), Expect(2) = e-132
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 2188 ETFGEAWPDFNEGLTYTDILKHPSS 2114
            +TFG  WPDFN+GLTY D++    S
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVSASDS 27


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  458 bits (1179), Expect(2) = e-130
 Identities = 228/341 (66%), Positives = 266/341 (78%)
 Frame = -3

Query: 2021 SLINFYSTKYSNSAPPHGWQQRIRNGQITFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDA 1842
            SLI+FYS KY +SAP  GW QRI+N QIT DGEV+TDP+T LR GS LVY RLPWKEPD 
Sbjct: 35   SLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVITDPETILRIGSDLVYRRLPWKEPDT 94

Query: 1841 PYLLQVLFEDDDLVALNKPSGLQVLPGGSFQQRTVLTQLQWRVKKQRSQRLAGNGALCGR 1662
            PYLL++L+ED++++ALNKPSGLQVLPGG FQQRTVLTQLQW   KQ              
Sbjct: 95   PYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQLQWWSSKQSFS--------VSE 146

Query: 1661 DSNPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFAYGTSVVGDKRITNLELNTTRKISKI 1482
            + +PVPVHRLGRGTSGILLCAKTKLA+ + AAYFA GTS V   R + +E  T RKISKI
Sbjct: 147  ELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNSTMEEGTKRKISKI 206

Query: 1481 YRALVTEIIEENQVVISQPIGVIQYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLV 1302
            YRALVT II +++V + QPIG +QYPGVA GLYVA  SGKPA SKV VLER+ +  H+LV
Sbjct: 207  YRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERDEQSKHTLV 266

Query: 1301 QVEIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAHDGGYQRPMKPV 1122
            QVEIQ+GRPHQIRIHLS +GHPLLGDPLYV GG PNC   E    S A DGGY+RP KPV
Sbjct: 267  QVEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTKPV 326

Query: 1121 PGDCGYYLHAYRLVLDHPTTNEALEITAPLPSILKTQEESQ 999
            PGDCGYYLHA++L+L HP TNE ++I APLP IL+T+ E++
Sbjct: 327  PGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367



 Score = 36.6 bits (83), Expect(2) = e-130
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 2197 RSVETFGEAWPDFNEGLTYTDILKHPSS 2114
            RS +  G  WPD N+GL Y D++K P S
Sbjct: 5    RSFQVIGIPWPDLNDGLFYNDVVKPPDS 32


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  457 bits (1176), Expect(2) = e-130
 Identities = 227/341 (66%), Positives = 266/341 (78%)
 Frame = -3

Query: 2021 SLINFYSTKYSNSAPPHGWQQRIRNGQITFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDA 1842
            SLI+FYS KY +SAP  GW QRI+N QIT DGEV+TDP+T LR GS LVY RLPWKEPD 
Sbjct: 35   SLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVITDPETILRIGSDLVYRRLPWKEPDT 94

Query: 1841 PYLLQVLFEDDDLVALNKPSGLQVLPGGSFQQRTVLTQLQWRVKKQRSQRLAGNGALCGR 1662
            PYLL++L+ED++++ALNKPSGLQVLPGG FQQRTVLTQLQW   KQ              
Sbjct: 95   PYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQLQWWSSKQSFS--------VSE 146

Query: 1661 DSNPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFAYGTSVVGDKRITNLELNTTRKISKI 1482
            + +PVPVHRLGRGTSGILLCAKTKLA+ + AAYFA GTS V   R + +E  T RKISKI
Sbjct: 147  ELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNSTMEEGTKRKISKI 206

Query: 1481 YRALVTEIIEENQVVISQPIGVIQYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLV 1302
            YRALVT II +++V + QPIG +QYPGVA GLYVA  SGKPA SKV VLER+ +  H+LV
Sbjct: 207  YRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERDEQSKHTLV 266

Query: 1301 QVEIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAHDGGYQRPMKPV 1122
            QVEIQ+GRPHQIRIHLS +GHPL+GDPLYV GG PNC   E    S A DGGY+RP KPV
Sbjct: 267  QVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTKPV 326

Query: 1121 PGDCGYYLHAYRLVLDHPTTNEALEITAPLPSILKTQEESQ 999
            PGDCGYYLHA++L+L HP TNE ++I APLP IL+T+ E++
Sbjct: 327  PGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367



 Score = 36.6 bits (83), Expect(2) = e-130
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 2197 RSVETFGEAWPDFNEGLTYTDILKHPSS 2114
            RS +  G  WPD N+GL Y D++K P S
Sbjct: 5    RSFQVIGIPWPDLNDGLFYNDVVKPPDS 32