BLASTX nr result

ID: Coptis24_contig00000428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000428
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra termi...   422   e-116
ref|NP_001234048.1| carbonic anhydrase [Solanum lycopersicum] gi...   397   e-108
dbj|BAM15483.1| carbonic anhydrase, partial [Solanum tuberosum]       397   e-108
sp|P27141.1|CAHC_TOBAC RecName: Full=Carbonic anhydrase, chlorop...   396   e-108
gb|AAA34057.1| carbonic anhydrase, partial [Nicotiana tabacum]        395   e-107

>gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra terminalis]
          Length = 324

 Score =  422 bits (1086), Expect = e-116
 Identities = 207/254 (81%), Positives = 231/254 (90%)
 Frame = +2

Query: 188 REEMGNDSYEKAVAGLAKLLSEKGNLEAVAAAKIEQITAELQTVDGKVAFDADERIKTGF 367
           RE+MG DSYE+A+AGL KLLSEKG+L+AVAAAKIEQITAELQT + K AFD  ER+KTGF
Sbjct: 66  REDMGKDSYEEAIAGLKKLLSEKGDLDAVAAAKIEQITAELQTTESK-AFDPIERMKTGF 124

Query: 368 IKYKKEKYETNPALHGELSKGQSPKFMVFACSDSRVCPSHIIDFQPGEAFVVRNIANMVP 547
           I +KKEKYETNPAL GEL+KGQSPKFMVFACSDSRVCPSH++DFQPGEAF+VRNIANMVP
Sbjct: 125 IHFKKEKYETNPALFGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVP 184

Query: 548 AYDLTKYSGIGAAVEYAVLHLKVEYIVVIGHSCCGGIKGLMSLPEDGSTSTEFIENWVKI 727
           AYD  +YSG+GAA+EYAVLHLKV  IVVIGHSCCGGIKGLMSL +DG+TST+FIE+WVKI
Sbjct: 185 AYDQIRYSGVGAAIEYAVLHLKVGNIVVIGHSCCGGIKGLMSLADDGTTSTDFIEDWVKI 244

Query: 728 CLPAKTKVKAEAPSAEFLDLCTLCEKEAVNVSLGNLLSYPFVREGLVKKTLALKGGYYDF 907
           CLPAK+KVKAE  S    + CT CEKE+VNVSLGNLL+YPFVREGLVKKTLALKGGYYDF
Sbjct: 245 CLPAKSKVKAEFGSLPLPEQCTYCEKESVNVSLGNLLTYPFVREGLVKKTLALKGGYYDF 304

Query: 908 VNGSFEMWALDFGL 949
           VNGSFE+W LDFGL
Sbjct: 305 VNGSFELWGLDFGL 318


>ref|NP_001234048.1| carbonic anhydrase [Solanum lycopersicum]
           gi|56562177|emb|CAH60891.1| carbonic anhydrase [Solanum
           lycopersicum]
          Length = 321

 Score =  397 bits (1020), Expect = e-108
 Identities = 192/254 (75%), Positives = 218/254 (85%)
 Frame = +2

Query: 188 REEMGNDSYEKAVAGLAKLLSEKGNLEAVAAAKIEQITAELQTVDGKVAFDADERIKTGF 367
           REEM  +SY++A+A L KLLSEK  L  VAAA+++QITAEL++ DG  AFD  E +K GF
Sbjct: 62  REEMAKESYDQAIAALEKLLSEKAELGPVAAARVDQITAELKSADGGKAFDPVEHMKAGF 121

Query: 368 IKYKKEKYETNPALHGELSKGQSPKFMVFACSDSRVCPSHIIDFQPGEAFVVRNIANMVP 547
           I +K EKY+TNPAL+GEL+KGQSPKFMVFACSDSRVCPSH+++FQPGEAF+VRNIANMVP
Sbjct: 122 IHFKTEKYDTNPALYGELAKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFMVRNIANMVP 181

Query: 548 AYDLTKYSGIGAAVEYAVLHLKVEYIVVIGHSCCGGIKGLMSLPEDGSTSTEFIENWVKI 727
           AYD  +YSG+GAA+EYAVLHLKVE IVVIGHS CGGIKGLMSLPEDGS ST FIE+WVKI
Sbjct: 182 AYDKVRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPEDGSESTAFIEDWVKI 241

Query: 728 CLPAKTKVKAEAPSAEFLDLCTLCEKEAVNVSLGNLLSYPFVREGLVKKTLALKGGYYDF 907
           CLPAK KV A+    EF   CT CEKEAVNVSLGNLL+YPFVREGLVKKTLALKGGYYDF
Sbjct: 242 CLPAKAKVLADHGGKEFAHQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGYYDF 301

Query: 908 VNGSFEMWALDFGL 949
           V G FE+W L+FGL
Sbjct: 302 VKGGFELWGLEFGL 315


>dbj|BAM15483.1| carbonic anhydrase, partial [Solanum tuberosum]
          Length = 321

 Score =  397 bits (1019), Expect = e-108
 Identities = 192/254 (75%), Positives = 218/254 (85%)
 Frame = +2

Query: 188 REEMGNDSYEKAVAGLAKLLSEKGNLEAVAAAKIEQITAELQTVDGKVAFDADERIKTGF 367
           REEM  +SY++A+A L KLLSEK  L  VAAA+++QITAEL++ DG  AFD  E +K GF
Sbjct: 62  REEMAKESYDQAIAALEKLLSEKAELGPVAAARVDQITAELKSADGSKAFDPVEHMKAGF 121

Query: 368 IKYKKEKYETNPALHGELSKGQSPKFMVFACSDSRVCPSHIIDFQPGEAFVVRNIANMVP 547
           I +K EKY+TNPAL+GEL+KGQSPKFMVFACSDSRVCPSH+++FQPGEAF+VRNIANMVP
Sbjct: 122 IHFKTEKYDTNPALYGELAKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFMVRNIANMVP 181

Query: 548 AYDLTKYSGIGAAVEYAVLHLKVEYIVVIGHSCCGGIKGLMSLPEDGSTSTEFIENWVKI 727
           AYD  +YSG+GAA+EYAVLHLKVE IVVIGHS CGGIKGLMSLPEDGS ST FIE+WVKI
Sbjct: 182 AYDKVRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPEDGSESTAFIEDWVKI 241

Query: 728 CLPAKTKVKAEAPSAEFLDLCTLCEKEAVNVSLGNLLSYPFVREGLVKKTLALKGGYYDF 907
           CLPAK KV A+    EF   CT CEKEAVNVSLGNLL+YPFVREGLVKKTLALKGGYYDF
Sbjct: 242 CLPAKAKVLADHGDKEFGHQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGYYDF 301

Query: 908 VNGSFEMWALDFGL 949
           V G FE+W L+FGL
Sbjct: 302 VKGGFELWGLEFGL 315


>sp|P27141.1|CAHC_TOBAC RecName: Full=Carbonic anhydrase, chloroplastic; AltName:
           Full=Carbonate dehydratase; Flags: Precursor
           gi|170219|gb|AAA34065.1| chloroplast carbonic anhydrase
           [Nicotiana tabacum] gi|445610|prf||1909357A carbonic
           anhydrase
          Length = 321

 Score =  396 bits (1018), Expect = e-108
 Identities = 194/254 (76%), Positives = 217/254 (85%)
 Frame = +2

Query: 188 REEMGNDSYEKAVAGLAKLLSEKGNLEAVAAAKIEQITAELQTVDGKVAFDADERIKTGF 367
           REEM  +SYE+A+A L KLLSEKG L  +AAA+++QITAELQ+ DG   FD  E +K GF
Sbjct: 62  REEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEHMKAGF 121

Query: 368 IKYKKEKYETNPALHGELSKGQSPKFMVFACSDSRVCPSHIIDFQPGEAFVVRNIANMVP 547
           I +K EKYE NPAL+GELSKGQSPKFMVFACSDSRVCPSH+++FQPGEAFVVRNIANMVP
Sbjct: 122 IHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVP 181

Query: 548 AYDLTKYSGIGAAVEYAVLHLKVEYIVVIGHSCCGGIKGLMSLPEDGSTSTEFIENWVKI 727
           AYD T+YSG+GAA+EYAVLHLKVE IVVIGHS CGGIKGLMSLP DGS ST FIE+WVKI
Sbjct: 182 AYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKI 241

Query: 728 CLPAKTKVKAEAPSAEFLDLCTLCEKEAVNVSLGNLLSYPFVREGLVKKTLALKGGYYDF 907
            LPAK KV+ E     F D CT CEKEAVNVSLGNLL+YPFVREGLVKKTLALKGG+YDF
Sbjct: 242 GLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDF 301

Query: 908 VNGSFEMWALDFGL 949
           VNG FE+W L+FGL
Sbjct: 302 VNGGFELWGLEFGL 315


>gb|AAA34057.1| carbonic anhydrase, partial [Nicotiana tabacum]
          Length = 264

 Score =  395 bits (1014), Expect = e-107
 Identities = 193/254 (75%), Positives = 217/254 (85%)
 Frame = +2

Query: 188 REEMGNDSYEKAVAGLAKLLSEKGNLEAVAAAKIEQITAELQTVDGKVAFDADERIKTGF 367
           REEM  +SYE+A+A L KLLSEKG L  +AAA+++QITAELQ+ DG   FD  E +K GF
Sbjct: 5   REEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEHMKAGF 64

Query: 368 IKYKKEKYETNPALHGELSKGQSPKFMVFACSDSRVCPSHIIDFQPGEAFVVRNIANMVP 547
           I +K EKYE NPAL+GELSKGQSPKFMVFACSDSRVCPSH+++FQPGEAFVVRNIANM+P
Sbjct: 65  IHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMIP 124

Query: 548 AYDLTKYSGIGAAVEYAVLHLKVEYIVVIGHSCCGGIKGLMSLPEDGSTSTEFIENWVKI 727
           AYD T+YSG+GAA+EYAVLHLKVE IVVIGHS CGGIKGLMSLP DGS ST FIE+WVKI
Sbjct: 125 AYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKI 184

Query: 728 CLPAKTKVKAEAPSAEFLDLCTLCEKEAVNVSLGNLLSYPFVREGLVKKTLALKGGYYDF 907
            LPAK KV+ E     F D CT CEKEAVNVSLGNLL+YPFVREGLVKKTLALKGG+YDF
Sbjct: 185 GLPAKAKVQGEHVDKCFGDQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDF 244

Query: 908 VNGSFEMWALDFGL 949
           VNG FE+W L+FGL
Sbjct: 245 VNGGFELWGLEFGL 258


Top