BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000426
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              472   e-131
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   472   e-131
ref|XP_003622426.1| U4/U6 small nuclear ribonucleoprotein Prp31 ...   456   e-126
gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding re...   456   e-126
ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828...   447   e-123

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  472 bits (1214), Expect = e-131
 Identities = 250/319 (78%), Positives = 265/319 (83%), Gaps = 1/319 (0%)
 Frame = -1

Query: 1006 IMQKVDDALQKGN-MSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKF 830
            IMQKV+DAL+KG+ MSN G+VLEDDPEYQLIVDCNALSVDIENEIVI+HNF+RDNYRLKF
Sbjct: 105  IMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKF 164

Query: 829  PELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 650
            PELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL
Sbjct: 165  PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 224

Query: 649  KKTXXXXXXXXXXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKM 470
            KKT                  DFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKM
Sbjct: 225  KKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKM 284

Query: 469  PACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAAR 290
            PACNVQLLGAKKK LAGFSTA+S   VG++EQTEIFQSTPPSLRMRACRLLAAKSTL+AR
Sbjct: 285  PACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSAR 344

Query: 289  VDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXX 110
            VDS RGDPTGK GR LR+EILKKIEKWQE            PDSEP              
Sbjct: 345  VDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKE 404

Query: 109  RYAVTDMRKLANRMQFGIP 53
            RYA+TDMRKLANRMQFG+P
Sbjct: 405  RYAITDMRKLANRMQFGVP 423


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
            vinifera]
          Length = 489

 Score =  472 bits (1214), Expect = e-131
 Identities = 250/319 (78%), Positives = 265/319 (83%), Gaps = 1/319 (0%)
 Frame = -1

Query: 1006 IMQKVDDALQKGN-MSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKF 830
            IMQKV+DAL+KG+ MSN G+VLEDDPEYQLIVDCNALSVDIENEIVI+HNF+RDNYRLKF
Sbjct: 71   IMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKF 130

Query: 829  PELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 650
            PELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL
Sbjct: 131  PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 190

Query: 649  KKTXXXXXXXXXXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKM 470
            KKT                  DFVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKM
Sbjct: 191  KKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKM 250

Query: 469  PACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAAR 290
            PACNVQLLGAKKK LAGFSTA+S   VG++EQTEIFQSTPPSLRMRACRLLAAKSTL+AR
Sbjct: 251  PACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSAR 310

Query: 289  VDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXX 110
            VDS RGDPTGK GR LR+EILKKIEKWQE            PDSEP              
Sbjct: 311  VDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKE 370

Query: 109  RYAVTDMRKLANRMQFGIP 53
            RYA+TDMRKLANRMQFG+P
Sbjct: 371  RYAITDMRKLANRMQFGVP 389


>ref|XP_003622426.1| U4/U6 small nuclear ribonucleoprotein Prp31 [Medicago truncatula]
            gi|355497441|gb|AES78644.1| U4/U6 small nuclear
            ribonucleoprotein Prp31 [Medicago truncatula]
          Length = 438

 Score =  456 bits (1172), Expect = e-126
 Identities = 240/318 (75%), Positives = 261/318 (82%)
 Frame = -1

Query: 1006 IMQKVDDALQKGNMSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKFP 827
            +MQKV++AL+KG+  +QGL LEDDPEYQLIV+CNALSVDIENEIVI+HNF+RD YRLKFP
Sbjct: 67   VMQKVEEALKKGSDVSQGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFP 126

Query: 826  ELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLK 647
            ELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L 
Sbjct: 127  ELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLS 186

Query: 646  KTXXXXXXXXXXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMP 467
            KT                  DFVESRMGYI+PN+SAIVGSAVAAKLMGTAGGLSALAKMP
Sbjct: 187  KTIEACDRALALDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMP 246

Query: 466  ACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAARV 287
            ACNVQLLGAKKK LAGFSTA+S  HVG++EQTEIFQ+TPPS RMRACRL+AAKSTLAARV
Sbjct: 247  ACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTEIFQTTPPSFRMRACRLVAAKSTLAARV 306

Query: 286  DSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXXR 107
            DSIRGDP+GK GR+L+DEI KKIEKWQE            PDSEP              R
Sbjct: 307  DSIRGDPSGKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKER 366

Query: 106  YAVTDMRKLANRMQFGIP 53
            YA+TDMRKLANRMQFGIP
Sbjct: 367  YAITDMRKLANRMQFGIP 384


>gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding region; NOSIC
            [Medicago truncatula]
          Length = 484

 Score =  456 bits (1172), Expect = e-126
 Identities = 240/318 (75%), Positives = 261/318 (82%)
 Frame = -1

Query: 1006 IMQKVDDALQKGNMSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKFP 827
            +MQKV++AL+KG+  +QGL LEDDPEYQLIV+CNALSVDIENEIVI+HNF+RD YRLKFP
Sbjct: 67   VMQKVEEALKKGSDVSQGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFP 126

Query: 826  ELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLK 647
            ELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L 
Sbjct: 127  ELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLS 186

Query: 646  KTXXXXXXXXXXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMP 467
            KT                  DFVESRMGYI+PN+SAIVGSAVAAKLMGTAGGLSALAKMP
Sbjct: 187  KTIEACDRALALDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMP 246

Query: 466  ACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAARV 287
            ACNVQLLGAKKK LAGFSTA+S  HVG++EQTEIFQ+TPPS RMRACRL+AAKSTLAARV
Sbjct: 247  ACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTEIFQTTPPSFRMRACRLVAAKSTLAARV 306

Query: 286  DSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXXR 107
            DSIRGDP+GK GR+L+DEI KKIEKWQE            PDSEP              R
Sbjct: 307  DSIRGDPSGKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKER 366

Query: 106  YAVTDMRKLANRMQFGIP 53
            YA+TDMRKLANRMQFGIP
Sbjct: 367  YAITDMRKLANRMQFGIP 384


>ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828|gb|ACF81498.1| unknown
            [Zea mays] gi|414585941|tpg|DAA36512.1| TPA: hypothetical
            protein ZEAMMB73_628259 [Zea mays]
            gi|414585942|tpg|DAA36513.1| TPA: hypothetical protein
            ZEAMMB73_628259 [Zea mays]
          Length = 485

 Score =  447 bits (1150), Expect = e-123
 Identities = 238/319 (74%), Positives = 257/319 (80%), Gaps = 1/319 (0%)
 Frame = -1

Query: 1006 IMQKVDDALQKG-NMSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKF 830
            IMQKV++ALQKG + SNQG +LE+DPEYQLIVDCNALSVDIENEI+I+HNF+RD YRLKF
Sbjct: 66   IMQKVENALQKGTDFSNQGSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKF 125

Query: 829  PELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 650
            PELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPL E+NL
Sbjct: 126  PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEDNL 185

Query: 649  KKTXXXXXXXXXXXXXXXXXXDFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKM 470
            +KT                  DFVESRMGYI+PNLSAIVGSAVA+KLMGTAGGL ALAKM
Sbjct: 186  EKTTEACDRALTLDASKKKVLDFVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKM 245

Query: 469  PACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAAR 290
            PACNVQLLGAK+K LAGFSTA+S   VG+LEQTE+FQSTPP LR RACRL+AAKSTLAAR
Sbjct: 246  PACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEVFQSTPPPLRTRACRLIAAKSTLAAR 305

Query: 289  VDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXX 110
            +DSIRGDPTGK GRNL +EI KKIEKWQE            PDSEP              
Sbjct: 306  IDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRLRKMKE 365

Query: 109  RYAVTDMRKLANRMQFGIP 53
            RYA TDM KLANRMQFGIP
Sbjct: 366  RYAQTDMMKLANRMQFGIP 384