BLASTX nr result
ID: Coptis24_contig00000423
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000423 (554 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group] g... 68 1e-09 gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japo... 68 1e-09 ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09 gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays] 66 3e-09 ref|NP_178132.1| pentatricopeptide repeat-containing protein [Ar... 66 4e-09 >ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group] gi|42407346|dbj|BAD08807.1| putative drought-inducible protein 1OS [Oryza sativa Japonica Group] gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa Japonica Group] gi|125562056|gb|EAZ07504.1| hypothetical protein OsI_29761 [Oryza sativa Indica Group] gi|215716978|dbj|BAG95341.1| unnamed protein product [Oryza sativa Japonica Group] Length = 443 Score = 67.8 bits (164), Expect = 1e-09 Identities = 35/66 (53%), Positives = 45/66 (68%) Frame = +2 Query: 2 FDLACTLSKYSMSKNWFPSVDTVCKLLEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGT 181 FDLA L K SM KNWFPSVDT+ +LL+GL KD A+ IM+L+ R P +S E+ T Sbjct: 372 FDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLVIGRKPSYSNDEVKT 431 Query: 182 FENIFS 199 F++I S Sbjct: 432 FQDILS 437 >gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group] Length = 515 Score = 67.8 bits (164), Expect = 1e-09 Identities = 35/66 (53%), Positives = 45/66 (68%) Frame = +2 Query: 2 FDLACTLSKYSMSKNWFPSVDTVCKLLEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGT 181 FDLA L K SM KNWFPSVDT+ +LL+GL KD A+ IM+L+ R P +S E+ T Sbjct: 444 FDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLVIGRKPSYSNDEVKT 503 Query: 182 FENIFS 199 F++I S Sbjct: 504 FQDILS 509 >ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Vitis vinifera] Length = 405 Score = 67.0 bits (162), Expect = 2e-09 Identities = 32/67 (47%), Positives = 46/67 (68%) Frame = +2 Query: 2 FDLACTLSKYSMSKNWFPSVDTVCKLLEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGT 181 FD+A T+ K M++NW +VDT+ KLLEGL + +AK I+ L RKRVP FS ++G Sbjct: 337 FDMAYTMCKDCMNRNWSLNVDTIYKLLEGLKGNGEIDKAKVILRLARKRVPSFSKNQLGV 396 Query: 182 FENIFSR 202 FE++ S+ Sbjct: 397 FESVLSK 403 >gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays] Length = 529 Score = 66.2 bits (160), Expect = 3e-09 Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 2/72 (2%) Frame = +2 Query: 2 FDLACTLSKYSMSKNWFPSVDTVCKLLEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGT 181 FDLA L K SM KNWFPSVDT+ +LL+GL KD K IM+L+ R P +S E+ Sbjct: 458 FDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSYGEMKV 517 Query: 182 FENIFS--RTGK 211 F++I S +TG+ Sbjct: 518 FKDILSHRKTGR 529 >ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g80150, mitochondrial; Flags: Precursor gi|332198242|gb|AEE36363.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 397 Score = 65.9 bits (159), Expect = 4e-09 Identities = 32/64 (50%), Positives = 47/64 (73%) Frame = +2 Query: 2 FDLACTLSKYSMSKNWFPSVDTVCKLLEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGT 181 FDLA T+ K M K W+P++DTV LL+GL KK + +AK+IMEL+ +RVPPF K++ + Sbjct: 333 FDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLS 392 Query: 182 FENI 193 ++I Sbjct: 393 LKSI 396