BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000415
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...   304   2e-80
gb|ABA93730.1| retrotransposon protein, putative, unclassified [...   301   2e-79
emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group]         298   1e-78
emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera]   297   2e-78
emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]   297   3e-78

>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711651|gb|ABF99446.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score =  304 bits (779), Expect = 2e-80
 Identities = 154/292 (52%), Positives = 209/292 (71%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    EVKNLGPLRYFLGIEIARSPKGISLSQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADD 180
            EVK+LGPLRYFLGIEIARS KGI LSQRKYVLDLLTDTGMLGCR  +TP+  N +L A  
Sbjct: 1103 EVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQS 1162

Query: 181  GPLLSDPSAYQRLVGRLIYLVNTRPDIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCP 360
            G  + D  AYQRLVGRLIYL +TRPDI+YAVS VS++MH PR  H+D V  IL+YLK  P
Sbjct: 1163 GDPV-DKEAYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTP 1221

Query: 361  GLGLFYAAGSQGPLECYTDSDYGGSIDSR-STTGLCAFRGNHLIXXXXXXXXXXXXXXAE 537
            G GL++       +E Y D+D+  S+D R ST+G C F G +L+              AE
Sbjct: 1222 GKGLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAE 1281

Query: 538  AEYRALALGTCEIMWLRSILGELGFAQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDV 717
            AEYRA+AL   E++W+RS+L EL   +S + +LHCDN++AI +A++ V H+RTKH+EID 
Sbjct: 1282 AEYRAMALSLSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDR 1341

Query: 718  HFLREKVRAGIVSPSFVRTKAQIADTLTKPVGPADLRSSIGKLGLLDIFAPA 873
             F++EK+ +G++   ++++  Q+AD LTK +GP++++S   K+G++DIF P+
Sbjct: 1342 FFIKEKIDSGVLRLEYIKSCEQLADCLTKGLGPSEIQSICNKMGMIDIFCPS 1393


>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 656

 Score =  301 bits (770), Expect = 2e-79
 Identities = 152/292 (52%), Positives = 208/292 (71%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    EVKNLGPLRYFLGIEIARSPKGISLSQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADD 180
            EVK+LGPLRYFLGIEIARS KGI LSQRKYVLDLLTDTGMLGCR  +TP+  N +L A  
Sbjct: 366  EVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQS 425

Query: 181  GPLLSDPSAYQRLVGRLIYLVNTRPDIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCP 360
            G  ++   AYQRLVGRLIYL +TRPDI+Y VS VS++MH PR  H+D V  IL+YLK  P
Sbjct: 426  GDPVNK-EAYQRLVGRLIYLCHTRPDISYVVSVVSRYMHDPRTGHLDVVHKILRYLKGTP 484

Query: 361  GLGLFYAAGSQGPLECYTDSDYGGSIDSR-STTGLCAFRGNHLIXXXXXXXXXXXXXXAE 537
            G GL++       +E Y D+D+  S+D R ST+G C F G +L+              AE
Sbjct: 485  GKGLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAE 544

Query: 538  AEYRALALGTCEIMWLRSILGELGFAQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDV 717
            AEYRA+AL   E++W+RS+L EL   +S + +LHCDN++AI +A++ V H+RTKH+EID 
Sbjct: 545  AEYRAMALSLSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDR 604

Query: 718  HFLREKVRAGIVSPSFVRTKAQIADTLTKPVGPADLRSSIGKLGLLDIFAPA 873
             F++EK+ +G++   ++++  Q+AD LTK +GP++++S   K+G++DIF P+
Sbjct: 605  FFIKEKIDSGVLRLEYIKSCEQLADCLTKGLGPSEIQSICNKMGMIDIFCPS 656


>emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group]
          Length = 343

 Score =  298 bits (763), Expect = 1e-78
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1   EVKNLGPLRYFLGIEIARSPKGISLSQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADD 180
           EVK+LGPLRYFLGIEIARS KGI LSQRKYVLDLLTDTGMLGCR  +TP+  N +L A  
Sbjct: 53  EVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQS 112

Query: 181 GPLLSDPSAYQRLVGRLIYLVNTRPDIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCP 360
           G  + D  AYQRLVGRLIYL +TRPDI+YAVS VS++MH PR  H+D V  IL+YLK  P
Sbjct: 113 GDPV-DKEAYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTP 171

Query: 361 GLGLFYAAGSQGPLECYTDSDYGGSIDSR-STTGLCAFRGNHLIXXXXXXXXXXXXXXAE 537
           G GL++       +E Y D+D+  S+D R ST+G   F G +L+              AE
Sbjct: 172 GKGLWFMKNGHLNVEGYCDADWASSMDDRRSTSGYYVFVGGNLVSWRSKKQAVVARSTAE 231

Query: 538 AEYRALALGTCEIMWLRSILGELGFAQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDV 717
           AEYRA+AL   E++W+RS+  EL   +S + +LHCDN++AI +A++ V H+RTKH+EID 
Sbjct: 232 AEYRAMALSLSEMLWMRSLFTELRVLRSDTVMLHCDNRSAISIANNPVQHDRTKHVEIDR 291

Query: 718 HFLREKVRAGIVSPSFVRTKAQIADTLTKPVGPADLRSSIGKLGLLDIFAPA 873
            F++EK+ +G++   ++++  Q+AD LTK +GP++++S   K+G++DIF P+
Sbjct: 292 FFIKEKINSGVLRLEYIKSCEQLADYLTKGLGPSEIQSICNKMGMIDIFFPS 343


>emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera]
          Length = 848

 Score =  297 bits (761), Expect = 2e-78
 Identities = 152/292 (52%), Positives = 195/292 (66%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    EVKNLGPLRYFLGIEIARSPKGISLSQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADD 180
            + K+LG L+YFLGIEIA+S  G+ LSQRKY LD+L +TGML C+PV TPM PN +LV   
Sbjct: 557  QTKDLGKLKYFLGIEIAQSSSGVXLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVXGQ 616

Query: 181  GPLLSDPSAYQRLVGRLIYLVNTRPDIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCP 360
            G  L DP  Y+RLVG+L YL  TRPDI++ VS VSQF+ +P  SH DAV  IL+Y+KS P
Sbjct: 617  GEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTP 676

Query: 361  GLGLFYAAGSQGPLECYTDSDYGGS-IDSRSTTGLCAFRGNHLIXXXXXXXXXXXXXXAE 537
            G G+ Y       +  YTD+D+ GS  D RST+G C F G +LI              AE
Sbjct: 677  GQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAE 736

Query: 538  AEYRALALGTCEIMWLRSILGELGFAQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDV 717
            AEYRA+AL TCE++WLR +L EL F +     L CDNQAA+H+AS+ V HERTKHIE+D 
Sbjct: 737  AEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDC 796

Query: 718  HFLREKVRAGIVSPSFVRTKAQIADTLTKPVGPADLRSSIGKLGLLDIFAPA 873
            HF+REK+ +G V+ SFV +  Q+AD  TK +    ++    KLG  D++APA
Sbjct: 797  HFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAPA 848


>emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]
          Length = 1225

 Score =  297 bits (760), Expect = 3e-78
 Identities = 152/292 (52%), Positives = 195/292 (66%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    EVKNLGPLRYFLGIEIARSPKGISLSQRKYVLDLLTDTGMLGCRPVSTPMVPNSRLVADD 180
            + K+LG L+YFLGIEIA+S  G+ LSQRKY LD+L +TGML C+PV TPM PN +LV   
Sbjct: 934  QTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQ 993

Query: 181  GPLLSDPSAYQRLVGRLIYLVNTRPDIAYAVSRVSQFMHAPRQSHMDAVEHILKYLKSCP 360
            G  L DP  Y+RLVG+L YL  TRPDI++ VS VSQF+ +P  SH DAV  IL+Y+KS P
Sbjct: 994  GEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTP 1053

Query: 361  GLGLFYAAGSQGPLECYTDSDYGGS-IDSRSTTGLCAFRGNHLIXXXXXXXXXXXXXXAE 537
            G G+ Y       +  YTD+D+ GS  D RST+G C F G +LI              AE
Sbjct: 1054 GQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAE 1113

Query: 538  AEYRALALGTCEIMWLRSILGELGFAQSGSSVLHCDNQAAIHLASDSVLHERTKHIEIDV 717
            AEYRA+AL TCE++WLR +L EL F +     L CDNQAA+H+AS+ V HERTKHIE+D 
Sbjct: 1114 AEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDC 1173

Query: 718  HFLREKVRAGIVSPSFVRTKAQIADTLTKPVGPADLRSSIGKLGLLDIFAPA 873
            HF+REK+ +G V+ SFV +  Q+AD  TK +    ++    KLG  D++APA
Sbjct: 1174 HFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAPA 1225