BLASTX nr result
ID: Coptis24_contig00000411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000411
(2297 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282932.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vit... 390 e-120
ref|XP_002300856.1| predicted protein [Populus trichocarpa] gi|2... 384 e-119
ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like... 383 e-119
gb|AGC55236.1| TT12a [Gossypium arboreum] 384 e-119
ref|XP_002307572.1| predicted protein [Populus trichocarpa] gi|2... 386 e-118
>ref|XP_002282932.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vitis vinifera]
gi|302143501|emb|CBI22062.3| unnamed protein product
[Vitis vinifera]
Length = 504
Score = 390 bits (1001), Expect(3) = e-120
Identities = 195/378 (51%), Positives = 261/378 (69%)
Frame = -3
Query: 1536 FEAKKYDSLGTICQQAIILHLGTAVVLSSLYWYSGTILQTFGLWAAIADQSQIVARGLLP 1357
+ AKKY ++G ICQ+AIILHLG AV+L+ LYW+SG L+ G +I+ Q QI ARGL+
Sbjct: 118 YGAKKYKAMGIICQRAIILHLGAAVLLTFLYWFSGPFLRAIGQSDSISAQGQIFARGLIL 177
Query: 1356 QLFAYALNFPLQRFLQAQNIVNPLVFTAVGIFFXXXXXXXXXXXXLNYGLMGAALTLSFS 1177
QL+A+A++ P+QRFLQAQNIVNPL + AVG+FF L+YGL+GAALTLSFS
Sbjct: 178 QLYAFAISCPMQRFLQAQNIVNPLAYMAVGVFFLHVLLTWLVVYVLDYGLLGAALTLSFS 237
Query: 1176 WWLQVXXXXXXXIFSPSCEKTWTGFSTKAFKGLWSYSKIAFSSLFVLSFESWFSIGLVLS 997
WW+ V + SPSC++TWTGFS+KAFKG+W Y K+ +S +L E W++ GLVL
Sbjct: 238 WWILVVVIALYILLSPSCKETWTGFSSKAFKGMWPYFKLTVASAVMLCLEIWYNQGLVLI 297
Query: 996 AGFFASPAVSIASFAICLNYLHLDLAFMLGVCTAASIRVGGELEGAHPTVAKFSAVVANC 817
+G ++P +S+ S +IC+NYL+ D+ FMLG+ A S+RV EL +HP VAK S +V N
Sbjct: 298 SGLLSNPTISLDSISICMNYLNWDMQFMLGLSAATSVRVSNELGASHPKVAKLSVLVVNT 357
Query: 816 NSLLISLIFCAIVLLYGGTLSKAFTSDIEVIKAVSDFSPLLAFSVFLNGIEPILSGVAIG 637
NS++IS+ F AI+L++ LSK FT+D EVI+AVS+ +PLLA SVFLNGI+PILSGVAIG
Sbjct: 358 NSIIISIFFSAIILIFKVGLSKLFTNDAEVIEAVSNLTPLLAISVFLNGIQPILSGVAIG 417
Query: 636 AGRAGFVVCSYACNXXXXXXXXXXGIAFMTNFGVSGIWWGVILGFLLQTITLVILAIRIN 457
+G V + F T+ GV+GIWWG+I+G LLQT+TL+IL R +
Sbjct: 418 SGWQAIVAYVNLATYYLIGLPIGCVLGFKTSLGVAGIWWGMIIGVLLQTVTLIILTARTD 477
Query: 456 WNKESEKLTRNDRKRIRN 403
WN E K +R+RN
Sbjct: 478 WNAEVSKAA----ERLRN 491
Score = 58.9 bits (141), Expect(3) = e-120
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = -2
Query: 1792 ELRQLWSLCGLCIIISVFNFMLSLVTQMFIGHYMGSLKLAGVSIAILEIQGFA 1634
E R LW L G I+ S+FN+MLS VT MF GH +G+L+LAG SIA + IQG A
Sbjct: 48 ESRLLWLLSGSSIVASIFNYMLSFVTLMFTGH-LGALELAGASIASVGIQGLA 99
Score = 35.0 bits (79), Expect(3) = e-120
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 1944 DLSSDRIEEYLGQENLPSEWWALLIGWELR 1855
DLSS +EE+L + + WW L GWE R
Sbjct: 21 DLSSFAVEEFLAHKPVAVRWWPRLFGWESR 50
>ref|XP_002300856.1| predicted protein [Populus trichocarpa] gi|222842582|gb|EEE80129.1|
predicted protein [Populus trichocarpa]
Length = 503
Score = 384 bits (986), Expect(3) = e-119
Identities = 197/387 (50%), Positives = 253/387 (65%)
Frame = -3
Query: 1536 FEAKKYDSLGTICQQAIILHLGTAVVLSSLYWYSGTILQTFGLWAAIADQSQIVARGLLP 1357
+ AKKY S+G ICQ+AIILHLG A +L+ LYW+SG +L+ G +IA+Q QI ARGL+P
Sbjct: 117 YGAKKYSSMGIICQKAIILHLGAAFLLTFLYWFSGPVLRGIGQSDSIAEQGQIFARGLIP 176
Query: 1356 QLFAYALNFPLQRFLQAQNIVNPLVFTAVGIFFXXXXXXXXXXXXLNYGLMGAALTLSFS 1177
QL+A+AL+ P+QRFLQAQNIVNPL + +VG+F L YGL+GAALTLSFS
Sbjct: 177 QLYAFALSCPMQRFLQAQNIVNPLAYMSVGVFLLHILLSWIVVYVLEYGLLGAALTLSFS 236
Query: 1176 WWLQVXXXXXXXIFSPSCEKTWTGFSTKAFKGLWSYSKIAFSSLFVLSFESWFSIGLVLS 997
WWL V + SPSC++TWTG S AF G+W Y K+ SS +L E W+S GLVL
Sbjct: 237 WWLFVIINALYIVLSPSCKETWTGLSISAFTGIWPYFKLTVSSAVMLCLEIWYSQGLVLI 296
Query: 996 AGFFASPAVSIASFAICLNYLHLDLAFMLGVCTAASIRVGGELEGAHPTVAKFSAVVANC 817
+G +P +S+ S +IC+NYL+ D+ FMLG+ A S+R+G EL HP VAKFS +V N
Sbjct: 297 SGLLPNPTISLDSISICMNYLNWDMQFMLGLSAATSVRIGNELGAGHPKVAKFSVIVVNA 356
Query: 816 NSLLISLIFCAIVLLYGGTLSKAFTSDIEVIKAVSDFSPLLAFSVFLNGIEPILSGVAIG 637
S++IS+IF AIVL + LS+ FTSD VI AVS+ +PLLA SVFLNGI+PILSGVAIG
Sbjct: 357 TSIIISIIFSAIVLSFRVGLSRLFTSDTAVIDAVSNLTPLLAISVFLNGIQPILSGVAIG 416
Query: 636 AGRAGFVVCSYACNXXXXXXXXXXGIAFMTNFGVSGIWWGVILGFLLQTITLVILAIRIN 457
+G V + F T+ GV GIW G+I G LQT+TL++L +R N
Sbjct: 417 SGWQAIVAYVNLATYYVIGLPIGCVLGFKTSLGVVGIWSGMITGVFLQTVTLIMLTVRTN 476
Query: 456 WNKESEKLTRNDRKRIRNKFISVVALI 376
WN E EK +F S+V I
Sbjct: 477 WNAEVEKAAERLNVSANEEFSSLVDTI 503
Score = 58.9 bits (141), Expect(3) = e-119
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = -2
Query: 1792 ELRQLWSLCGLCIIISVFNFMLSLVTQMFIGHYMGSLKLAGVSIAILEIQGFA 1634
E R LW L G II+SV FMLS VTQMF GH +G+L+LAG SIA + IQG A
Sbjct: 47 ESRVLWLLSGSSIIVSVATFMLSFVTQMFSGH-LGALELAGASIANVGIQGLA 98
Score = 38.1 bits (87), Expect(3) = e-119
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 1947 TDLSSDRIEEYLGQENLPSEWWALLIGWELR 1855
TDLSS IEE+L +P WW L+ WE R
Sbjct: 19 TDLSSGAIEEFLEHGPVPFRWWPRLVAWESR 49
>ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max]
Length = 505
Score = 383 bits (983), Expect(3) = e-119
Identities = 191/378 (50%), Positives = 254/378 (67%)
Frame = -3
Query: 1536 FEAKKYDSLGTICQQAIILHLGTAVVLSSLYWYSGTILQTFGLWAAIADQSQIVARGLLP 1357
+ AKK+ ++ I Q+AIILH+G AV+LS LYW+SG L+ G +IA++ Q+ ARG++
Sbjct: 118 YGAKKHGAMSIILQRAIILHIGAAVILSFLYWFSGDFLKAIGQSDSIAERGQVFARGIIL 177
Query: 1356 QLFAYALNFPLQRFLQAQNIVNPLVFTAVGIFFXXXXXXXXXXXXLNYGLMGAALTLSFS 1177
QL+A+A++ P+QRFLQAQNIVNPL + +VG+F L YGL GAALTLSFS
Sbjct: 178 QLYAFAISCPMQRFLQAQNIVNPLAYMSVGVFLVHILLSWLVIYVLGYGLQGAALTLSFS 237
Query: 1176 WWLQVXXXXXXXIFSPSCEKTWTGFSTKAFKGLWSYSKIAFSSLFVLSFESWFSIGLVLS 997
WWL V IFSP C++TW GFS KAFKG+W Y K+ +S +L E W++ GLVL
Sbjct: 238 WWLLVLFNGLYIIFSPRCKETWAGFSVKAFKGIWPYFKLTVASAVMLCLEVWYNQGLVLL 297
Query: 996 AGFFASPAVSIASFAICLNYLHLDLAFMLGVCTAASIRVGGELEGAHPTVAKFSAVVANC 817
+G ++P +S+ S +IC+NYL+ D+ FMLG+ TAAS+RV EL +HP VAKFS V N
Sbjct: 298 SGLLSNPTISLDSISICMNYLNWDMQFMLGLSTAASVRVSNELGASHPRVAKFSVFVVNG 357
Query: 816 NSLLISLIFCAIVLLYGGTLSKAFTSDIEVIKAVSDFSPLLAFSVFLNGIEPILSGVAIG 637
S+LIS++FC I+L++ +LSK FTSD +VI AVS+ +PLLA SVF NGI+PILSGVAIG
Sbjct: 358 TSILISVVFCTIILIFRVSLSKLFTSDSDVIDAVSNLTPLLAISVFFNGIQPILSGVAIG 417
Query: 636 AGRAGFVVCSYACNXXXXXXXXXXGIAFMTNFGVSGIWWGVILGFLLQTITLVILAIRIN 457
+G V + + F T+ GV+GIWWG+ILG L+QT+TL+IL R N
Sbjct: 418 SGWQALVAYVNLASYYVVGLTVGCVLGFKTSLGVAGIWWGMILGVLIQTVTLIILTARTN 477
Query: 456 WNKESEKLTRNDRKRIRN 403
W E EK K N
Sbjct: 478 WQAEVEKAVVRINKSAEN 495
Score = 61.6 bits (148), Expect(3) = e-119
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -2
Query: 1792 ELRQLWSLCGLCIIISVFNFMLSLVTQMFIGHYMGSLKLAGVSIAILEIQGFA 1634
E R LW L G I++S+FN+MLS VT MF GH +GSL+LAG S+A + IQG A
Sbjct: 48 ESRLLWLLSGASIVVSIFNYMLSFVTLMFTGH-LGSLELAGASVASVGIQGLA 99
Score = 35.0 bits (79), Expect(3) = e-119
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 1944 DLSSDRIEEYLGQENLPSEWWALLIGWELR 1855
+LSSD IEE+L + WW+ LI WE R
Sbjct: 21 NLSSDAIEEFLEHRPIALRWWSKLIVWESR 50
>gb|AGC55236.1| TT12a [Gossypium arboreum]
Length = 506
Score = 384 bits (987), Expect(3) = e-119
Identities = 191/367 (52%), Positives = 251/367 (68%)
Frame = -3
Query: 1536 FEAKKYDSLGTICQQAIILHLGTAVVLSSLYWYSGTILQTFGLWAAIADQSQIVARGLLP 1357
+ AK+Y ++G ICQ+AIILHLG AV+L+ LYW+SG +LQ G +IA Q Q+ +RGL+P
Sbjct: 120 YGAKQYSAMGIICQRAIILHLGAAVLLTFLYWFSGDVLQAIGQTESIAQQGQVFSRGLIP 179
Query: 1356 QLFAYALNFPLQRFLQAQNIVNPLVFTAVGIFFXXXXXXXXXXXXLNYGLMGAALTLSFS 1177
Q++A+A++ P+QRFLQAQNIVNPL F ++GIF L GL+GAALTLS S
Sbjct: 180 QIYAFAISCPMQRFLQAQNIVNPLAFMSIGIFLVHVLLTWLVVNVLGCGLLGAALTLSLS 239
Query: 1176 WWLQVXXXXXXXIFSPSCEKTWTGFSTKAFKGLWSYSKIAFSSLFVLSFESWFSIGLVLS 997
WW V + SPSC++TW+G S +AF G+W Y K+ +S +L E W++ GLVL
Sbjct: 240 WWFLVVINGLYIVLSPSCKETWSGLSFRAFTGIWPYFKLTVASAVMLCLEIWYNQGLVLI 299
Query: 996 AGFFASPAVSIASFAICLNYLHLDLAFMLGVCTAASIRVGGELEGAHPTVAKFSAVVANC 817
+G ++P +++ S +IC+NYL+ D+ FMLG+ AAS+RV EL HP VAKFS V N
Sbjct: 300 SGLLSNPTIALDSISICMNYLNWDMQFMLGLSAAASVRVSNELGAGHPRVAKFSVFVVNG 359
Query: 816 NSLLISLIFCAIVLLYGGTLSKAFTSDIEVIKAVSDFSPLLAFSVFLNGIEPILSGVAIG 637
S+LIS++F AIVL++ LSKAFTSD EVI+AVSD +PLLA SVFLNGI+PILSGVAIG
Sbjct: 360 TSILISIVFSAIVLIFRVGLSKAFTSDSEVIEAVSDLTPLLAISVFLNGIQPILSGVAIG 419
Query: 636 AGRAGFVVCSYACNXXXXXXXXXXGIAFMTNFGVSGIWWGVILGFLLQTITLVILAIRIN 457
+G V + F T+ GV+GIWWG+I+G LLQT TLV+L N
Sbjct: 420 SGWQAIVAYVNLATYYIIGLPIGCVLGFKTSLGVAGIWWGMIIGVLLQTATLVVLTATTN 479
Query: 456 WNKESEK 436
WNKE EK
Sbjct: 480 WNKEVEK 486
Score = 60.1 bits (144), Expect(3) = e-119
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -2
Query: 1792 ELRQLWSLCGLCIIISVFNFMLSLVTQMFIGHYMGSLKLAGVSIAILEIQGFA 1634
E R LW L G I++S+FN+MLS VT MF GH +G+L+LAG SIA + IQG A
Sbjct: 50 ESRLLWLLSGSSIVLSIFNYMLSFVTLMFTGH-LGALELAGASIASVGIQGLA 101
Score = 33.5 bits (75), Expect(3) = e-119
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 1944 DLSSDRIEEYLGQENLPSEWWALLIGWELR 1855
DLSS IEE+L + WW L+ WE R
Sbjct: 23 DLSSVAIEEFLQHRPIALRWWPRLVAWESR 52
>ref|XP_002307572.1| predicted protein [Populus trichocarpa] gi|222857021|gb|EEE94568.1|
predicted protein [Populus trichocarpa]
Length = 505
Score = 386 bits (991), Expect(3) = e-118
Identities = 197/387 (50%), Positives = 253/387 (65%)
Frame = -3
Query: 1536 FEAKKYDSLGTICQQAIILHLGTAVVLSSLYWYSGTILQTFGLWAAIADQSQIVARGLLP 1357
+ AKKY S+G ICQ+AIILHLG A +L+ LYW+SG +L+ G +IA+Q +I ARGL+P
Sbjct: 119 YGAKKYSSMGIICQRAIILHLGAAFLLTFLYWFSGPVLRAIGQTESIAEQGEIFARGLIP 178
Query: 1356 QLFAYALNFPLQRFLQAQNIVNPLVFTAVGIFFXXXXXXXXXXXXLNYGLMGAALTLSFS 1177
QL+A+A + P+QRFLQAQNIVNPL + +V +F L YGL+GAALTLSFS
Sbjct: 179 QLYAFAFSCPMQRFLQAQNIVNPLAYMSVAVFLLHILLTWIVVYVLQYGLLGAALTLSFS 238
Query: 1176 WWLQVXXXXXXXIFSPSCEKTWTGFSTKAFKGLWSYSKIAFSSLFVLSFESWFSIGLVLS 997
WWL V I SPSC++TWTG S AF G+W Y K+ SS +L E W+S GLVL
Sbjct: 239 WWLFVILNGLYIILSPSCKETWTGLSASAFTGIWPYFKLTVSSAVMLCLEIWYSQGLVLI 298
Query: 996 AGFFASPAVSIASFAICLNYLHLDLAFMLGVCTAASIRVGGELEGAHPTVAKFSAVVANC 817
+G P V++ S +IC+NYL+ D+ FMLG+ + S+RVG EL HP VAK S +V N
Sbjct: 299 SGLLTDPTVALDSISICMNYLNWDMQFMLGLSASTSVRVGNELGAGHPKVAKLSVMVVNG 358
Query: 816 NSLLISLIFCAIVLLYGGTLSKAFTSDIEVIKAVSDFSPLLAFSVFLNGIEPILSGVAIG 637
S++IS+IF AIVL++ LSK FT+D EVI AVSD +PLLA SVFLNGI+PILSGVAIG
Sbjct: 359 TSIVISIIFSAIVLIFRVGLSKLFTTDYEVIDAVSDLTPLLAISVFLNGIQPILSGVAIG 418
Query: 636 AGRAGFVVCSYACNXXXXXXXXXXGIAFMTNFGVSGIWWGVILGFLLQTITLVILAIRIN 457
+G V +AF T+ GV+GIWWG++ G LLQTITL+IL R N
Sbjct: 419 SGWQATVAYVNLATYYVIGLPIGCVLAFKTSLGVAGIWWGMVAGVLLQTITLIILTARTN 478
Query: 456 WNKESEKLTRNDRKRIRNKFISVVALI 376
W+ E + +K F +V I
Sbjct: 479 WDTEVQNAAERVKKSANEDFSGLVEAI 505
Score = 58.9 bits (141), Expect(3) = e-118
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = -2
Query: 1792 ELRQLWSLCGLCIIISVFNFMLSLVTQMFIGHYMGSLKLAGVSIAILEIQGFA 1634
E R LW L G II+SV FMLS VTQMF GH +G+L+LAG SIA + IQG A
Sbjct: 49 ESRLLWILSGSSIIVSVSTFMLSFVTQMFSGH-LGALELAGASIANVGIQGLA 100
Score = 32.3 bits (72), Expect(3) = e-118
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 1944 DLSSDRIEEYLGQENLPSEWWALLIGWELR 1855
DLSS IEE+L + WW L+ WE R
Sbjct: 22 DLSSVTIEEFLEHGPVAVRWWPRLVAWESR 51