BLASTX nr result

ID: Coptis24_contig00000405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000405
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283034.1| PREDICTED: uncharacterized protein LOC100256...   371   e-100
ref|XP_002533640.1| conserved hypothetical protein [Ricinus comm...   358   1e-96
ref|XP_002305962.1| predicted protein [Populus trichocarpa] gi|2...   358   1e-96
ref|XP_004141492.1| PREDICTED: uncharacterized protein LOC101211...   353   5e-95
gb|ADN34282.1| hypothetical protein [Cucumis melo subsp. melo]        353   5e-95

>ref|XP_002283034.1| PREDICTED: uncharacterized protein LOC100256561 [Vitis vinifera]
           gi|298204389|emb|CBI16869.3| unnamed protein product
           [Vitis vinifera]
          Length = 340

 Score =  371 bits (953), Expect = e-100
 Identities = 181/255 (70%), Positives = 203/255 (79%)
 Frame = -2

Query: 998 PTSLRWDRETIQFSVNAWVFIVAVLAILPLTPRNLSFKAYRLSFMGTLCSSXXXXXXXXX 819
           PTS+RWDR+TIQFSVNAWVF+VAVLAI P+ P+NLS +AYRLSFMGT CSS         
Sbjct: 111 PTSMRWDRQTIQFSVNAWVFVVAVLAIFPIIPQNLSNRAYRLSFMGTACSSLYSLYSLY- 169

Query: 818 XXXXXXXXXXXXXXXXXXXXXXXYGKPRAWNLQGIQVWIQSVFGTKDFIYFLYCLMFVTS 639
                                   GKPRAWNLQ +QVW QSV  TKDF+YF+YCLMFVTS
Sbjct: 170 ------------------------GKPRAWNLQAVQVWFQSVIATKDFLYFIYCLMFVTS 205

Query: 638 QLQLKFALIPVLCQALDCVSKFLRRNFSRSSLYRKYLEEPCLWVESNTTTLSILSSHAEI 459
            L LKFALIP+LC+A++ V+KFLRRNF+RSSLYRKYLEEPC+WVESN TTLSILSSH EI
Sbjct: 206 HLYLKFALIPILCRAVEHVAKFLRRNFTRSSLYRKYLEEPCVWVESNATTLSILSSHTEI 265

Query: 458 GLGFVLIISLLSWQRNIIQTLMYWQLLKLMYRAPVTAGYHQSVWTKIGQTINPLVNRYAP 279
           GLGF+LI+SLLSWQRNIIQT MYWQLLKLMY APVTA YHQSVW+KIG+TINPLV+RYAP
Sbjct: 266 GLGFLLILSLLSWQRNIIQTFMYWQLLKLMYHAPVTASYHQSVWSKIGRTINPLVHRYAP 325

Query: 278 FLNTPISTAQRWFLR 234
           FLNTPIS  QRW+ R
Sbjct: 326 FLNTPISAIQRWWFR 340


>ref|XP_002533640.1| conserved hypothetical protein [Ricinus communis]
           gi|223526469|gb|EEF28743.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 346

 Score =  358 bits (918), Expect = 1e-96
 Identities = 175/255 (68%), Positives = 201/255 (78%)
 Frame = -2

Query: 998 PTSLRWDRETIQFSVNAWVFIVAVLAILPLTPRNLSFKAYRLSFMGTLCSSXXXXXXXXX 819
           PTS+RWDR+TIQFSVNAWVF+VAVLAI+PL PRNLS +AYRLSFMGT CSS         
Sbjct: 117 PTSVRWDRQTIQFSVNAWVFVVAVLAIIPLVPRNLSNRAYRLSFMGTACSSLYSLYTLY- 175

Query: 818 XXXXXXXXXXXXXXXXXXXXXXXYGKPRAWNLQGIQVWIQSVFGTKDFIYFLYCLMFVTS 639
                                   G+PRA NLQG+Q + QS+  TKDFIYF+YCL FVTS
Sbjct: 176 ------------------------GRPRALNLQGLQAYFQSIIATKDFIYFIYCLTFVTS 211

Query: 638 QLQLKFALIPVLCQALDCVSKFLRRNFSRSSLYRKYLEEPCLWVESNTTTLSILSSHAEI 459
            L LKFALIP+LC+AL+ V+KFLR NFSRS+LYRKYLE+PC+WVESNT TLSILSSHAEI
Sbjct: 212 HLCLKFALIPILCRALEQVAKFLRHNFSRSTLYRKYLEDPCVWVESNTATLSILSSHAEI 271

Query: 458 GLGFVLIISLLSWQRNIIQTLMYWQLLKLMYRAPVTAGYHQSVWTKIGQTINPLVNRYAP 279
           GLGF+LI+SL SWQRNIIQT MYWQLLKLM+ APVTAGYHQSVW K+G+++NPLV+RY P
Sbjct: 272 GLGFLLILSLFSWQRNIIQTFMYWQLLKLMHHAPVTAGYHQSVWAKVGRSVNPLVHRYCP 331

Query: 278 FLNTPISTAQRWFLR 234
           FLNTPI  AQRW+LR
Sbjct: 332 FLNTPIYAAQRWWLR 346


>ref|XP_002305962.1| predicted protein [Populus trichocarpa] gi|222848926|gb|EEE86473.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  358 bits (918), Expect = 1e-96
 Identities = 173/255 (67%), Positives = 201/255 (78%)
 Frame = -2

Query: 998 PTSLRWDRETIQFSVNAWVFIVAVLAILPLTPRNLSFKAYRLSFMGTLCSSXXXXXXXXX 819
           PTS+ W R+TIQFSVNAWVF+VAVLAI+PL P+NLS +AYRLS +GT CSS         
Sbjct: 116 PTSVHWYRQTIQFSVNAWVFVVAVLAIIPLAPKNLSSRAYRLSLIGTACSSLYSLYTLY- 174

Query: 818 XXXXXXXXXXXXXXXXXXXXXXXYGKPRAWNLQGIQVWIQSVFGTKDFIYFLYCLMFVTS 639
                                   G+PRAWNLQGIQV++QS+  TKDFIYF+YCL FVTS
Sbjct: 175 ------------------------GRPRAWNLQGIQVYLQSIIATKDFIYFIYCLTFVTS 210

Query: 638 QLQLKFALIPVLCQALDCVSKFLRRNFSRSSLYRKYLEEPCLWVESNTTTLSILSSHAEI 459
            L LK ALIP+LC++L+ V+KFLRRNFSRS+LYRKYLE+PC+WVESNTTTLSILSSH EI
Sbjct: 211 HLCLKVALIPILCRSLEHVAKFLRRNFSRSTLYRKYLEDPCVWVESNTTTLSILSSHTEI 270

Query: 458 GLGFVLIISLLSWQRNIIQTLMYWQLLKLMYRAPVTAGYHQSVWTKIGQTINPLVNRYAP 279
           GLGF+LI+SL SWQRNIIQT MYWQLLK+MY APVTAGYHQSVW KIG+TINPL++RY P
Sbjct: 271 GLGFLLIVSLFSWQRNIIQTFMYWQLLKIMYHAPVTAGYHQSVWAKIGRTINPLIHRYCP 330

Query: 278 FLNTPISTAQRWFLR 234
           FLNTP+S  QRW+LR
Sbjct: 331 FLNTPLSAVQRWWLR 345


>ref|XP_004141492.1| PREDICTED: uncharacterized protein LOC101211899 [Cucumis sativus]
           gi|449481440|ref|XP_004156183.1| PREDICTED:
           uncharacterized protein LOC101228016 [Cucumis sativus]
          Length = 345

 Score =  353 bits (905), Expect = 5e-95
 Identities = 171/255 (67%), Positives = 198/255 (77%)
 Frame = -2

Query: 998 PTSLRWDRETIQFSVNAWVFIVAVLAILPLTPRNLSFKAYRLSFMGTLCSSXXXXXXXXX 819
           PT LRWDR+TIQFSVNAWVFIVAVLAI PL P+NLS +AYRLSFMGT CSS         
Sbjct: 116 PTPLRWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLY- 174

Query: 818 XXXXXXXXXXXXXXXXXXXXXXXYGKPRAWNLQGIQVWIQSVFGTKDFIYFLYCLMFVTS 639
                                   GKPRAWNLQ +Q ++QS+ GTKDFIYF YC+ FVTS
Sbjct: 175 ------------------------GKPRAWNLQALQAYLQSIIGTKDFIYFTYCITFVTS 210

Query: 638 QLQLKFALIPVLCQALDCVSKFLRRNFSRSSLYRKYLEEPCLWVESNTTTLSILSSHAEI 459
            + LKFALIP+LC+AL+ V+KFLRRNF+RSSLYRKYLE+PC+WVESN+TTLSILSS AEI
Sbjct: 211 NICLKFALIPILCRALEHVAKFLRRNFARSSLYRKYLEDPCVWVESNSTTLSILSSQAEI 270

Query: 458 GLGFVLIISLLSWQRNIIQTLMYWQLLKLMYRAPVTAGYHQSVWTKIGQTINPLVNRYAP 279
           GLGF+LIISLLSWQRN + T MYWQLLKLMY APVT+GYH+S WT IG+ ++PL+ RYAP
Sbjct: 271 GLGFILIISLLSWQRNFLHTFMYWQLLKLMYHAPVTSGYHRSAWTNIGRVVSPLIYRYAP 330

Query: 278 FLNTPISTAQRWFLR 234
           FLNTP+S AQRW+ R
Sbjct: 331 FLNTPLSMAQRWWFR 345


>gb|ADN34282.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 345

 Score =  353 bits (905), Expect = 5e-95
 Identities = 171/255 (67%), Positives = 197/255 (77%)
 Frame = -2

Query: 998 PTSLRWDRETIQFSVNAWVFIVAVLAILPLTPRNLSFKAYRLSFMGTLCSSXXXXXXXXX 819
           PT LRWDR+TIQFSVNAWVFIVAVLAI PL P+NLS +AYRLSFMGT CSS         
Sbjct: 116 PTPLRWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLY- 174

Query: 818 XXXXXXXXXXXXXXXXXXXXXXXYGKPRAWNLQGIQVWIQSVFGTKDFIYFLYCLMFVTS 639
                                   GKPRAWNLQ +Q + QS+ GTKDFIYF YC+ FVTS
Sbjct: 175 ------------------------GKPRAWNLQALQAYFQSIIGTKDFIYFTYCITFVTS 210

Query: 638 QLQLKFALIPVLCQALDCVSKFLRRNFSRSSLYRKYLEEPCLWVESNTTTLSILSSHAEI 459
            + LKFALIP+LC++L+ V+KFLRRNF+RSSLYRKYLEEPC+WVESN+TTLSILSS AEI
Sbjct: 211 NICLKFALIPILCRSLEHVAKFLRRNFARSSLYRKYLEEPCVWVESNSTTLSILSSQAEI 270

Query: 458 GLGFVLIISLLSWQRNIIQTLMYWQLLKLMYRAPVTAGYHQSVWTKIGQTINPLVNRYAP 279
           GLGF+LIISLLSWQRN + T MYWQLLKLMY APVT+GYH+S WT IG+ ++PL+ RYAP
Sbjct: 271 GLGFILIISLLSWQRNFLHTFMYWQLLKLMYHAPVTSGYHRSAWTNIGRVVSPLIYRYAP 330

Query: 278 FLNTPISTAQRWFLR 234
           FLNTP+S AQRW+ R
Sbjct: 331 FLNTPLSMAQRWWFR 345


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