BLASTX nr result
ID: Coptis24_contig00000402
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000402 (2928 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32444.3| unnamed protein product [Vitis vinifera] 312 e-121 ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote... 293 e-120 ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 293 e-120 ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote... 307 e-120 ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ... 284 e-116 >emb|CBI32444.3| unnamed protein product [Vitis vinifera] Length = 342 Score = 312 bits (800), Expect(2) = e-121 Identities = 150/192 (78%), Positives = 171/192 (89%) Frame = -1 Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1297 S + K++W+GDL WMD+NYL TCFG TGEVSSIK+IRNKQTGQSEGYGFV F+SRA A Sbjct: 4 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63 Query: 1296 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1117 EKIL +YNGTLMPN++QPFRLNWA+FSTG+RR TD GSD SIFVGDLA DVTD LL ETF Sbjct: 64 EKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQETF 122 Query: 1116 AGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 937 A RY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVATP+ Sbjct: 123 ATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPK 182 Query: 936 KATGHQQQYSSQ 901 KA+G+QQQYSSQ Sbjct: 183 KASGYQQQYSSQ 194 Score = 152 bits (384), Expect(2) = e-121 Identities = 74/91 (81%), Positives = 81/91 (89%) Frame = -3 Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620 Q + DS NTTIFVGGLD +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+A Sbjct: 213 QANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDA 272 Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 527 LQ L+GTVIGKQTVRLSWGRNPA+KQ R DS Sbjct: 273 LQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 303 Score = 58.5 bits (140), Expect = 1e-05 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 25/193 (12%) Frame = -1 Query: 1458 SIWIGDLQYWMDENYLNTCFG-QTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282 SI++GDL + + L F + V KV+ + TG+S+GYGFV F + + Sbjct: 103 SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 162 Query: 1281 AYNGTLMPN--------------------SDQPFRLNWASFSTGE-RRGTDVGSDHS--- 1174 NG + S Q L + S G +G+ D + Sbjct: 163 EMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTT 222 Query: 1173 IFVGDLAPDVTDILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDE 994 IFVG L +VTD L ++F+ ++ V K+ + KG GFV+FA+ N A+ Sbjct: 223 IFVGGLDSEVTDEDLRQSFS-QFGEVVSVKIPV------GKGCGFVQFANRNSAEDALQR 275 Query: 993 MNGQFCSSRPMRI 955 +NG + +R+ Sbjct: 276 LNGTVIGKQTVRL 288 >ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 2 [Vitis vinifera] Length = 418 Score = 293 bits (750), Expect(2) = e-120 Identities = 139/191 (72%), Positives = 165/191 (86%) Frame = -1 Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1297 S +N++IW+GDL WMDENYL++CF TGE++S+KVIRNKQTG SEGYGFV F+S AAA Sbjct: 79 SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138 Query: 1296 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1117 EK+LQ Y G LMPN+DQPFRLNWA+FS G++R +D G D SIFVGDLA DV+D LLHETF Sbjct: 139 EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197 Query: 1116 AGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 937 AG+Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR Sbjct: 198 AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257 Query: 936 KATGHQQQYSS 904 K++G+QQQYSS Sbjct: 258 KSSGYQQQYSS 268 Score = 168 bits (425), Expect(2) = e-120 Identities = 91/141 (64%), Positives = 98/141 (69%) Frame = -3 Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620 Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+A Sbjct: 280 QSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDA 339 Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNX 440 LQ L+GTVIGKQTVRLSWGRNPANKQ R D YA DP Sbjct: 340 LQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPT- 398 Query: 439 XXXXXXXXXYPVYGNPQQQVS 377 YPVYGN QQQVS Sbjct: 399 -MYAAAYGAYPVYGNHQQQVS 418 Score = 69.7 bits (169), Expect = 4e-09 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 17/185 (9%) Frame = -1 Query: 1458 SIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282 SI++GDL + ++ L+ F G+ V + KV+ + TG+S+GYGFV F + + Sbjct: 178 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237 Query: 1281 AYNGTLM-----------PNSDQPFRLNWASFSTGERRGTDVGSDH-----SIFVGDLAP 1150 NG P ++ ++S G V SD +IFVG L P Sbjct: 238 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 297 Query: 1149 DVTDILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSS 970 +V+D L + F+ +Y + K+ + KG GFV+FA+ N A+ ++NG Sbjct: 298 NVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 350 Query: 969 RPMRI 955 + +R+ Sbjct: 351 QTVRL 355 >ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 1 [Vitis vinifera] Length = 409 Score = 293 bits (750), Expect(2) = e-120 Identities = 139/191 (72%), Positives = 165/191 (86%) Frame = -1 Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1297 S +N++IW+GDL WMDENYL++CF TGE++S+KVIRNKQTG SEGYGFV F+S AAA Sbjct: 79 SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138 Query: 1296 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1117 EK+LQ Y G LMPN+DQPFRLNWA+FS G++R +D G D SIFVGDLA DV+D LLHETF Sbjct: 139 EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197 Query: 1116 AGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 937 AG+Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR Sbjct: 198 AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257 Query: 936 KATGHQQQYSS 904 K++G+QQQYSS Sbjct: 258 KSSGYQQQYSS 268 Score = 168 bits (425), Expect(2) = e-120 Identities = 91/141 (64%), Positives = 98/141 (69%) Frame = -3 Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620 Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+A Sbjct: 271 QSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDA 330 Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNX 440 LQ L+GTVIGKQTVRLSWGRNPANKQ R D YA DP Sbjct: 331 LQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPT- 389 Query: 439 XXXXXXXXXYPVYGNPQQQVS 377 YPVYGN QQQVS Sbjct: 390 -MYAAAYGAYPVYGNHQQQVS 409 Score = 70.1 bits (170), Expect = 3e-09 Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 10/178 (5%) Frame = -1 Query: 1458 SIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282 SI++GDL + ++ L+ F G+ V + KV+ + TG+S+GYGFV F + + Sbjct: 178 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237 Query: 1281 AYNGTLMPNSDQPFRLNWAS--FSTG--ERRGTDVGSDH-----SIFVGDLAPDVTDILL 1129 NG S +P R+ A+ S+G ++ + V SD +IFVG L P+V+D L Sbjct: 238 EMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDL 295 Query: 1128 HETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRI 955 + F+ +Y + K+ + KG GFV+FA+ N A+ ++NG + +R+ Sbjct: 296 RQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRL 346 >ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 1 [Vitis vinifera] Length = 416 Score = 307 bits (787), Expect(2) = e-120 Identities = 150/194 (77%), Positives = 171/194 (88%), Gaps = 2/194 (1%) Frame = -1 Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEV--SSIKVIRNKQTGQSEGYGFVVFYSRA 1303 S + K++W+GDL WMD+NYL TCFG TGEV SSIK+IRNKQTGQSEGYGFV F+SRA Sbjct: 76 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRA 135 Query: 1302 AAEKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHE 1123 AEKIL +YNGTLMPN++QPFRLNWA+FSTG+RR TD GSD SIFVGDLA DVTD LL E Sbjct: 136 TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQE 194 Query: 1122 TFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVAT 943 TFA RY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVAT Sbjct: 195 TFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVAT 254 Query: 942 PRKATGHQQQYSSQ 901 P+KA+G+QQQYSSQ Sbjct: 255 PKKASGYQQQYSSQ 268 Score = 152 bits (384), Expect(2) = e-120 Identities = 74/91 (81%), Positives = 81/91 (89%) Frame = -3 Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620 Q + DS NTTIFVGGLD +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+A Sbjct: 287 QANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDA 346 Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 527 LQ L+GTVIGKQTVRLSWGRNPA+KQ R DS Sbjct: 347 LQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 377 Score = 58.5 bits (140), Expect = 1e-05 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 25/193 (12%) Frame = -1 Query: 1458 SIWIGDLQYWMDENYLNTCFG-QTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282 SI++GDL + + L F + V KV+ + TG+S+GYGFV F + + Sbjct: 177 SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 236 Query: 1281 AYNGTLMPN--------------------SDQPFRLNWASFSTGE-RRGTDVGSDHS--- 1174 NG + S Q L + S G +G+ D + Sbjct: 237 EMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTT 296 Query: 1173 IFVGDLAPDVTDILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDE 994 IFVG L +VTD L ++F+ ++ V K+ + KG GFV+FA+ N A+ Sbjct: 297 IFVGGLDSEVTDEDLRQSFS-QFGEVVSVKIPV------GKGCGFVQFANRNSAEDALQR 349 Query: 993 MNGQFCSSRPMRI 955 +NG + +R+ Sbjct: 350 LNGTVIGKQTVRL 362 >ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like [Glycine max] Length = 401 Score = 284 bits (727), Expect(2) = e-116 Identities = 137/183 (74%), Positives = 156/183 (85%) Frame = -1 Query: 1464 NKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKIL 1285 NK+IWIGDL +WMDENYL+ CF TGE+SSIKVIRNKQTG SEGYGFV FYS A AEK+L Sbjct: 72 NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVL 131 Query: 1284 QAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETFAGRY 1105 Q Y G LMPN++QPFRLNWA+FSTG+ +G+D D SIFVGDLA DVTD LLHETFA Y Sbjct: 132 QNYAGILMPNAEQPFRLNWATFSTGD-KGSDNVPDLSIFVGDLAADVTDSLLHETFASVY 190 Query: 1104 QSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATG 925 SVK AKVV DANTGRSKGYGFVRF DDNE+++A+ +MNG +CSSRPMRIG ATPRK++G Sbjct: 191 PSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSG 250 Query: 924 HQQ 916 HQQ Sbjct: 251 HQQ 253 Score = 162 bits (410), Expect(2) = e-116 Identities = 88/141 (62%), Positives = 97/141 (68%) Frame = -3 Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620 Q++ DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AEEA Sbjct: 263 QSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEA 322 Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNX 440 LQ L+GT IGKQTVRLSWGRNPANKQ R D YA DP+ Sbjct: 323 LQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPS- 381 Query: 439 XXXXXXXXXYPVYGNPQQQVS 377 YP+YG QQQVS Sbjct: 382 -IYAAAYGAYPLYGGHQQQVS 401 Score = 67.4 bits (163), Expect = 2e-08 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 13/181 (7%) Frame = -1 Query: 1458 SIWIGDLQYWMDENYLNTCFGQT-GEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282 SI++GDL + ++ L+ F V + KV+ + TG+S+GYGFV F + + Sbjct: 167 SIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMT 226 Query: 1281 AYNGTLMPNSDQPFRLNWAS-----------FSTGERRGTDVGSDHS-IFVGDLAPDVTD 1138 NG S +P R+ A+ S G ++ S ++ IFVG L P+V+D Sbjct: 227 QMNGVYC--SSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSD 284 Query: 1137 ILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMR 958 L + F+ +Y + K+ + KG GFV+FA+ N A+ ++NG + +R Sbjct: 285 EDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTTIGKQTVR 337 Query: 957 I 955 + Sbjct: 338 L 338