BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000402
         (2928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32444.3| unnamed protein product [Vitis vinifera]              312   e-121
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   293   e-120
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   293   e-120
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote...   307   e-120
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   284   e-116

>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  312 bits (800), Expect(2) = e-121
 Identities = 150/192 (78%), Positives = 171/192 (89%)
 Frame = -1

Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1297
            S +  K++W+GDL  WMD+NYL TCFG TGEVSSIK+IRNKQTGQSEGYGFV F+SRA A
Sbjct: 4    STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63

Query: 1296 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1117
            EKIL +YNGTLMPN++QPFRLNWA+FSTG+RR TD GSD SIFVGDLA DVTD LL ETF
Sbjct: 64   EKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQETF 122

Query: 1116 AGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 937
            A RY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVATP+
Sbjct: 123  ATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPK 182

Query: 936  KATGHQQQYSSQ 901
            KA+G+QQQYSSQ
Sbjct: 183  KASGYQQQYSSQ 194



 Score =  152 bits (384), Expect(2) = e-121
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = -3

Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620
           Q + DS NTTIFVGGLD  +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 213 QANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDA 272

Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 527
           LQ L+GTVIGKQTVRLSWGRNPA+KQ R DS
Sbjct: 273 LQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 303



 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
 Frame = -1

Query: 1458 SIWIGDLQYWMDENYLNTCFG-QTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282
            SI++GDL   + +  L   F  +   V   KV+ +  TG+S+GYGFV F       + + 
Sbjct: 103  SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 162

Query: 1281 AYNGTLMPN--------------------SDQPFRLNWASFSTGE-RRGTDVGSDHS--- 1174
              NG    +                    S Q   L   + S G   +G+    D +   
Sbjct: 163  EMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTT 222

Query: 1173 IFVGDLAPDVTDILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDE 994
            IFVG L  +VTD  L ++F+ ++  V   K+ +       KG GFV+FA+ N    A+  
Sbjct: 223  IFVGGLDSEVTDEDLRQSFS-QFGEVVSVKIPV------GKGCGFVQFANRNSAEDALQR 275

Query: 993  MNGQFCSSRPMRI 955
            +NG     + +R+
Sbjct: 276  LNGTVIGKQTVRL 288


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  293 bits (750), Expect(2) = e-120
 Identities = 139/191 (72%), Positives = 165/191 (86%)
 Frame = -1

Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1297
            S  +N++IW+GDL  WMDENYL++CF  TGE++S+KVIRNKQTG SEGYGFV F+S AAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1296 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1117
            EK+LQ Y G LMPN+DQPFRLNWA+FS G++R +D G D SIFVGDLA DV+D LLHETF
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197

Query: 1116 AGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 937
            AG+Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR
Sbjct: 198  AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257

Query: 936  KATGHQQQYSS 904
            K++G+QQQYSS
Sbjct: 258  KSSGYQQQYSS 268



 Score =  168 bits (425), Expect(2) = e-120
 Identities = 91/141 (64%), Positives = 98/141 (69%)
 Frame = -3

Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620
           Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 280 QSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDA 339

Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNX 440
           LQ L+GTVIGKQTVRLSWGRNPANKQ R D                   YA     DP  
Sbjct: 340 LQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPT- 398

Query: 439 XXXXXXXXXYPVYGNPQQQVS 377
                    YPVYGN QQQVS
Sbjct: 399 -MYAAAYGAYPVYGNHQQQVS 418



 Score = 69.7 bits (169), Expect = 4e-09
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
 Frame = -1

Query: 1458 SIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282
            SI++GDL   + ++ L+  F G+   V + KV+ +  TG+S+GYGFV F       + + 
Sbjct: 178  SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237

Query: 1281 AYNGTLM-----------PNSDQPFRLNWASFSTGERRGTDVGSDH-----SIFVGDLAP 1150
              NG              P     ++  ++S       G  V SD      +IFVG L P
Sbjct: 238  EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 297

Query: 1149 DVTDILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSS 970
            +V+D  L + F+ +Y  +   K+ +       KG GFV+FA+ N    A+ ++NG     
Sbjct: 298  NVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 350

Query: 969  RPMRI 955
            + +R+
Sbjct: 351  QTVRL 355


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  293 bits (750), Expect(2) = e-120
 Identities = 139/191 (72%), Positives = 165/191 (86%)
 Frame = -1

Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1297
            S  +N++IW+GDL  WMDENYL++CF  TGE++S+KVIRNKQTG SEGYGFV F+S AAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1296 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1117
            EK+LQ Y G LMPN+DQPFRLNWA+FS G++R +D G D SIFVGDLA DV+D LLHETF
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197

Query: 1116 AGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 937
            AG+Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR
Sbjct: 198  AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257

Query: 936  KATGHQQQYSS 904
            K++G+QQQYSS
Sbjct: 258  KSSGYQQQYSS 268



 Score =  168 bits (425), Expect(2) = e-120
 Identities = 91/141 (64%), Positives = 98/141 (69%)
 Frame = -3

Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620
           Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 271 QSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDA 330

Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNX 440
           LQ L+GTVIGKQTVRLSWGRNPANKQ R D                   YA     DP  
Sbjct: 331 LQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPT- 389

Query: 439 XXXXXXXXXYPVYGNPQQQVS 377
                    YPVYGN QQQVS
Sbjct: 390 -MYAAAYGAYPVYGNHQQQVS 409



 Score = 70.1 bits (170), Expect = 3e-09
 Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
 Frame = -1

Query: 1458 SIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282
            SI++GDL   + ++ L+  F G+   V + KV+ +  TG+S+GYGFV F       + + 
Sbjct: 178  SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237

Query: 1281 AYNGTLMPNSDQPFRLNWAS--FSTG--ERRGTDVGSDH-----SIFVGDLAPDVTDILL 1129
              NG     S +P R+  A+   S+G  ++  + V SD      +IFVG L P+V+D  L
Sbjct: 238  EMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDL 295

Query: 1128 HETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRI 955
             + F+ +Y  +   K+ +       KG GFV+FA+ N    A+ ++NG     + +R+
Sbjct: 296  RQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRL 346


>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 416

 Score =  307 bits (787), Expect(2) = e-120
 Identities = 150/194 (77%), Positives = 171/194 (88%), Gaps = 2/194 (1%)
 Frame = -1

Query: 1476 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEV--SSIKVIRNKQTGQSEGYGFVVFYSRA 1303
            S +  K++W+GDL  WMD+NYL TCFG TGEV  SSIK+IRNKQTGQSEGYGFV F+SRA
Sbjct: 76   STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRA 135

Query: 1302 AAEKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHE 1123
             AEKIL +YNGTLMPN++QPFRLNWA+FSTG+RR TD GSD SIFVGDLA DVTD LL E
Sbjct: 136  TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQE 194

Query: 1122 TFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVAT 943
            TFA RY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVAT
Sbjct: 195  TFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVAT 254

Query: 942  PRKATGHQQQYSSQ 901
            P+KA+G+QQQYSSQ
Sbjct: 255  PKKASGYQQQYSSQ 268



 Score =  152 bits (384), Expect(2) = e-120
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = -3

Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620
           Q + DS NTTIFVGGLD  +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 287 QANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDA 346

Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 527
           LQ L+GTVIGKQTVRLSWGRNPA+KQ R DS
Sbjct: 347 LQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 377



 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
 Frame = -1

Query: 1458 SIWIGDLQYWMDENYLNTCFG-QTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282
            SI++GDL   + +  L   F  +   V   KV+ +  TG+S+GYGFV F       + + 
Sbjct: 177  SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 236

Query: 1281 AYNGTLMPN--------------------SDQPFRLNWASFSTGE-RRGTDVGSDHS--- 1174
              NG    +                    S Q   L   + S G   +G+    D +   
Sbjct: 237  EMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTT 296

Query: 1173 IFVGDLAPDVTDILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDE 994
            IFVG L  +VTD  L ++F+ ++  V   K+ +       KG GFV+FA+ N    A+  
Sbjct: 297  IFVGGLDSEVTDEDLRQSFS-QFGEVVSVKIPV------GKGCGFVQFANRNSAEDALQR 349

Query: 993  MNGQFCSSRPMRI 955
            +NG     + +R+
Sbjct: 350  LNGTVIGKQTVRL 362


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 401

 Score =  284 bits (727), Expect(2) = e-116
 Identities = 137/183 (74%), Positives = 156/183 (85%)
 Frame = -1

Query: 1464 NKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKIL 1285
            NK+IWIGDL +WMDENYL+ CF  TGE+SSIKVIRNKQTG SEGYGFV FYS A AEK+L
Sbjct: 72   NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVL 131

Query: 1284 QAYNGTLMPNSDQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETFAGRY 1105
            Q Y G LMPN++QPFRLNWA+FSTG+ +G+D   D SIFVGDLA DVTD LLHETFA  Y
Sbjct: 132  QNYAGILMPNAEQPFRLNWATFSTGD-KGSDNVPDLSIFVGDLAADVTDSLLHETFASVY 190

Query: 1104 QSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATG 925
             SVK AKVV DANTGRSKGYGFVRF DDNE+++A+ +MNG +CSSRPMRIG ATPRK++G
Sbjct: 191  PSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSG 250

Query: 924  HQQ 916
            HQQ
Sbjct: 251  HQQ 253



 Score =  162 bits (410), Expect(2) = e-116
 Identities = 88/141 (62%), Positives = 97/141 (68%)
 Frame = -3

Query: 799 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 620
           Q++ DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AEEA
Sbjct: 263 QSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEA 322

Query: 619 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNX 440
           LQ L+GT IGKQTVRLSWGRNPANKQ R D                   YA     DP+ 
Sbjct: 323 LQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPS- 381

Query: 439 XXXXXXXXXYPVYGNPQQQVS 377
                    YP+YG  QQQVS
Sbjct: 382 -IYAAAYGAYPLYGGHQQQVS 401



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
 Frame = -1

Query: 1458 SIWIGDLQYWMDENYLNTCFGQT-GEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1282
            SI++GDL   + ++ L+  F      V + KV+ +  TG+S+GYGFV F       + + 
Sbjct: 167  SIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMT 226

Query: 1281 AYNGTLMPNSDQPFRLNWAS-----------FSTGERRGTDVGSDHS-IFVGDLAPDVTD 1138
              NG     S +P R+  A+            S G    ++  S ++ IFVG L P+V+D
Sbjct: 227  QMNGVYC--SSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSD 284

Query: 1137 ILLHETFAGRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMR 958
              L + F+ +Y  +   K+ +       KG GFV+FA+ N    A+ ++NG     + +R
Sbjct: 285  EDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTTIGKQTVR 337

Query: 957  I 955
            +
Sbjct: 338  L 338