BLASTX nr result
ID: Coptis24_contig00000394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000394
(2170 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7... 852 0.0
ref|XP_002311694.1| predicted protein [Populus trichocarpa] gi|2... 844 0.0
ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 7... 840 0.0
ref|XP_002314503.1| predicted protein [Populus trichocarpa] gi|2... 835 0.0
ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus ... 834 0.0
>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
gi|296083725|emb|CBI23714.3| unnamed protein product
[Vitis vinifera]
Length = 524
Score = 852 bits (2201), Expect = 0.0
Identities = 413/520 (79%), Positives = 468/520 (90%)
Frame = -2
Query: 2022 MICAISGEVPEEPVVSKNSGLLFERRLIEHHIKDYGKCPVTGEPLSMDEIVPVKTNKVVK 1843
M C++SGEVPEEPVVSK SGLLFE+RLIE HI DYGKCP+TGEPL+MD+IVP++T K+VK
Sbjct: 1 MNCSMSGEVPEEPVVSKKSGLLFEKRLIERHISDYGKCPITGEPLTMDDIVPIQTGKIVK 60
Query: 1842 PRPLHAASIPGLLGIFQNEWDALMLSHFAVEQQLHTARQELSHALYQHDAACRVIARLKK 1663
PRP+ AASIPG+LG+FQ EWD LMLS+FA+EQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61 PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
Query: 1662 ERDDARSLLAQAERQIPMXXXXXXXXXXXXXXNGKRAAEGEELGPSEKRFRPGISKDIID 1483
ERD+ARSLLAQ+ERQIPM NGKRAAE EELGP+ K+ RPGIS II
Sbjct: 121 ERDEARSLLAQSERQIPMSMSTATAVNASALSNGKRAAEDEELGPNGKKLRPGISASIIT 180
Query: 1482 ELTNCNTALSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKSSKQGILSIDIHPDKDILA 1303
ELT+CN ALSQQRK+RQIP++LAPID++ERYTQLSS+PLHK++K GILS DI+ KDI+A
Sbjct: 181 ELTDCNAALSQQRKKRQIPTSLAPIDAVERYTQLSSYPLHKTNKPGILSADIYYSKDIIA 240
Query: 1302 TGGADTNAVIFDRTSGQILSTLSGHSKKVNSVKFVSREELFVTGSADKTVRVWQGQEDGN 1123
TGG D NAV+FDR SGQILSTLSGHSKKV SVKFV++++LF+T SADKTVRVWQG ++ N
Sbjct: 241 TGGVDANAVLFDRQSGQILSTLSGHSKKVTSVKFVTQDDLFLTASADKTVRVWQGSDNEN 300
Query: 1122 YTCRHILKDHTAEVQAVTIHATDNYFVTASLDNTWCFYDLSSGLCLAQVEATDTSGTEGY 943
Y CRHILKDHTAEVQAVT+HAT+NYFVTASLDNTWCFYDLSSGLCL QV D SG+EGY
Sbjct: 301 YNCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQV--ADASGSEGY 358
Query: 942 TSAAFHPDGLILGTGTSEAIVKIWDVKTQSNVAKFEGHTGAVTAISFSENGYFLATAAHD 763
TSAAFHPDGLILGTGTSEA+VKIWDVK+Q+NVA+F+GH GAVTAISFSENGYFLATAAHD
Sbjct: 359 TSAAFHPDGLILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAAHD 418
Query: 762 GVKLWDLRKLRNFRTFSPYDSDTPTNSVEFDHSGSYLAMGGSDVRVYQVGSVKSDWNCGK 583
GVKLWDLRKLRNFRTF+PYDS+T TNSVEFDHSG+YLA+ GSD+RVYQV +VKS+WNC K
Sbjct: 419 GVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGNYLAIAGSDIRVYQVANVKSEWNCIK 478
Query: 582 TFPDLSGTGRATCVKFGPDAKYLAVGSMDRNLRVFGLPSE 463
TFPDLSGTG+ATCVKFGPDAKYLAVGSMDRNLR+FGLP +
Sbjct: 479 TFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIFGLPGD 518
>ref|XP_002311694.1| predicted protein [Populus trichocarpa] gi|222851514|gb|EEE89061.1|
predicted protein [Populus trichocarpa]
Length = 524
Score = 844 bits (2180), Expect = 0.0
Identities = 413/520 (79%), Positives = 455/520 (87%)
Frame = -2
Query: 2022 MICAISGEVPEEPVVSKNSGLLFERRLIEHHIKDYGKCPVTGEPLSMDEIVPVKTNKVVK 1843
M C+ISGEVPE+PVVSK SGLL+E+RLIE HI +YGKCP+TGEPL+MD+IVPVKT K+VK
Sbjct: 1 MHCSISGEVPEQPVVSKKSGLLYEKRLIERHISEYGKCPITGEPLTMDDIVPVKTGKIVK 60
Query: 1842 PRPLHAASIPGLLGIFQNEWDALMLSHFAVEQQLHTARQELSHALYQHDAACRVIARLKK 1663
PR + ASIPG+LG+FQNEWD LMLS+FA+EQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61 PRTVQTASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
Query: 1662 ERDDARSLLAQAERQIPMXXXXXXXXXXXXXXNGKRAAEGEELGPSEKRFRPGISKDIID 1483
ERD+ARSLLAQAERQIPM NGKRAAE ++LG KR RPGIS II
Sbjct: 121 ERDEARSLLAQAERQIPMSASEAVTENASVLSNGKRAAEDDDLGQPGKRVRPGISASIIT 180
Query: 1482 ELTNCNTALSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKSSKQGILSIDIHPDKDILA 1303
ELT+CN LSQQRK+RQIP TLAPI +LERYTQLSSHPLHK+SK GILSIDI KDI+A
Sbjct: 181 ELTDCNATLSQQRKKRQIPPTLAPIGALERYTQLSSHPLHKTSKPGILSIDIQYSKDIIA 240
Query: 1302 TGGADTNAVIFDRTSGQILSTLSGHSKKVNSVKFVSREELFVTGSADKTVRVWQGQEDGN 1123
TGG D AV+FDR SGQI+STLSGHSKKV SVKFV+ E F+TGSADKT+RVWQG EDGN
Sbjct: 241 TGGVDATAVVFDRLSGQIVSTLSGHSKKVTSVKFVAEGEFFLTGSADKTIRVWQGSEDGN 300
Query: 1122 YTCRHILKDHTAEVQAVTIHATDNYFVTASLDNTWCFYDLSSGLCLAQVEATDTSGTEGY 943
Y CRHILKDHTAEVQAVT+HAT+NYFVTASLDNTWCFYDLSSGLC+ QV DTS T+GY
Sbjct: 301 YDCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCMTQV--ADTSKTDGY 358
Query: 942 TSAAFHPDGLILGTGTSEAIVKIWDVKTQSNVAKFEGHTGAVTAISFSENGYFLATAAHD 763
TSAAFHPDGLILGTGTSEA+VKIWDVK+Q+NVAKFEGH G VTAISFSENGYFLATAAHD
Sbjct: 359 TSAAFHPDGLILGTGTSEAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLATAAHD 418
Query: 762 GVKLWDLRKLRNFRTFSPYDSDTPTNSVEFDHSGSYLAMGGSDVRVYQVGSVKSDWNCGK 583
VKLWDLRKL+NFRT + YDSDTPTNSVEFDHSGSYL + GSD+RVYQVGSVK+DWNC K
Sbjct: 419 SVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHSGSYLGIAGSDIRVYQVGSVKADWNCIK 478
Query: 582 TFPDLSGTGRATCVKFGPDAKYLAVGSMDRNLRVFGLPSE 463
T PDLSGTGRATC+KFGPDA Y+AVGSMDRNLRVFGLP +
Sbjct: 479 TLPDLSGTGRATCLKFGPDANYIAVGSMDRNLRVFGLPGD 518
>ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis sativus]
Length = 522
Score = 840 bits (2171), Expect = 0.0
Identities = 406/520 (78%), Positives = 462/520 (88%)
Frame = -2
Query: 2022 MICAISGEVPEEPVVSKNSGLLFERRLIEHHIKDYGKCPVTGEPLSMDEIVPVKTNKVVK 1843
M C+ISGE+PEEPVVS+NSGLLFE+RLIE HI DYGKCPVTGEPLS+D+IVP+KT K+VK
Sbjct: 1 MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
Query: 1842 PRPLHAASIPGLLGIFQNEWDALMLSHFAVEQQLHTARQELSHALYQHDAACRVIARLKK 1663
PR AASIPG+LG+FQNEWD L+LS+FA+EQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61 PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 118
Query: 1662 ERDDARSLLAQAERQIPMXXXXXXXXXXXXXXNGKRAAEGEELGPSEKRFRPGISKDIID 1483
ERD+ARSLLA AERQ+P+ NGKR E EELGP K+ RPGIS +I
Sbjct: 119 ERDEARSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVIS 178
Query: 1482 ELTNCNTALSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKSSKQGILSIDIHPDKDILA 1303
ELT CN ALSQQRKRRQIP+TL P+++LE YTQ+SSHPLHK+SK GI+S+DIH +KD++A
Sbjct: 179 ELTECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIA 238
Query: 1302 TGGADTNAVIFDRTSGQILSTLSGHSKKVNSVKFVSREELFVTGSADKTVRVWQGQEDGN 1123
TGG DTNAV+F R+SG+ILSTLSGHSKKV SVKFV R++LF+TGSADKTVRVWQ +DGN
Sbjct: 239 TGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 298
Query: 1122 YTCRHILKDHTAEVQAVTIHATDNYFVTASLDNTWCFYDLSSGLCLAQVEATDTSGTEGY 943
Y CRHILKDHTAEVQAVT+HAT+++FVTASLDNTWCFY+L+SGLCL QV + S TEGY
Sbjct: 299 YNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQV--AEDSETEGY 356
Query: 942 TSAAFHPDGLILGTGTSEAIVKIWDVKTQSNVAKFEGHTGAVTAISFSENGYFLATAAHD 763
TSAAFHPDGLILGTGTSEA+VKIWDVK+Q NVAKF+GH GAVTAISFSENGYFLATAAHD
Sbjct: 357 TSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHD 416
Query: 762 GVKLWDLRKLRNFRTFSPYDSDTPTNSVEFDHSGSYLAMGGSDVRVYQVGSVKSDWNCGK 583
GVKLWDLRKL+NFRTF+PYDSDTPTNSV+FDHSGSYLA+ GSD+RVYQV SVKS+WNC K
Sbjct: 417 GVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIK 476
Query: 582 TFPDLSGTGRATCVKFGPDAKYLAVGSMDRNLRVFGLPSE 463
T PDLSGTG+ATC+KFGPDAKYLAVGSMDRNLR+FG+P E
Sbjct: 477 TLPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGE 516
>ref|XP_002314503.1| predicted protein [Populus trichocarpa] gi|222863543|gb|EEF00674.1|
predicted protein [Populus trichocarpa]
Length = 524
Score = 835 bits (2158), Expect = 0.0
Identities = 407/520 (78%), Positives = 452/520 (86%)
Frame = -2
Query: 2022 MICAISGEVPEEPVVSKNSGLLFERRLIEHHIKDYGKCPVTGEPLSMDEIVPVKTNKVVK 1843
M C+ISGEVP EPVVSK SG+L+E+RLIE HI +YGKCP+TGEPL+MD++VPV+T K+VK
Sbjct: 1 MHCSISGEVPGEPVVSKRSGILYEKRLIERHISEYGKCPITGEPLTMDDVVPVETGKIVK 60
Query: 1842 PRPLHAASIPGLLGIFQNEWDALMLSHFAVEQQLHTARQELSHALYQHDAACRVIARLKK 1663
PR + ASIPG+LG+FQNEWD LMLS+FA+EQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61 PRTVQTASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
Query: 1662 ERDDARSLLAQAERQIPMXXXXXXXXXXXXXXNGKRAAEGEELGPSEKRFRPGISKDIID 1483
ERD+ARSLLAQAERQ+PM NGKRAA+ ++LG KR RPGIS II
Sbjct: 121 ERDEARSLLAQAERQVPMFTSEAVTANASVLSNGKRAAKDDDLGQPGKRIRPGISASIIT 180
Query: 1482 ELTNCNTALSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKSSKQGILSIDIHPDKDILA 1303
ELT CN ALSQQRK+RQ+P TLAPID+LERYTQLSSHPLH++SK GILSIDI KDI+A
Sbjct: 181 ELTECNAALSQQRKKRQVPPTLAPIDALERYTQLSSHPLHRTSKPGILSIDIQYSKDIIA 240
Query: 1302 TGGADTNAVIFDRTSGQILSTLSGHSKKVNSVKFVSREELFVTGSADKTVRVWQGQEDGN 1123
TGGAD AVIFDR SGQI S LSGHSKKV SVKFV E F+TGSADKTVRVWQG EDGN
Sbjct: 241 TGGADATAVIFDRPSGQIASALSGHSKKVTSVKFVGEGEFFLTGSADKTVRVWQGSEDGN 300
Query: 1122 YTCRHILKDHTAEVQAVTIHATDNYFVTASLDNTWCFYDLSSGLCLAQVEATDTSGTEGY 943
Y CRHILKDHTAEVQAVT+HAT+NYFVTASLDNTWCFYDLSSGLCL QV DTS T+GY
Sbjct: 301 YDCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQV--ADTSKTDGY 358
Query: 942 TSAAFHPDGLILGTGTSEAIVKIWDVKTQSNVAKFEGHTGAVTAISFSENGYFLATAAHD 763
TSAAFHPDGLILGTGTSEA+VKIWDVK+Q+NVAKFEGH G VTAI+FSENGYFLATAAHD
Sbjct: 359 TSAAFHPDGLILGTGTSEAVVKIWDVKSQANVAKFEGHVGPVTAITFSENGYFLATAAHD 418
Query: 762 GVKLWDLRKLRNFRTFSPYDSDTPTNSVEFDHSGSYLAMGGSDVRVYQVGSVKSDWNCGK 583
VKLWDLRKL+NFRT + YDSDTPTNSVEFDHSGSYL + GSD+RVYQVGSVK+DWNC K
Sbjct: 419 SVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHSGSYLGISGSDIRVYQVGSVKADWNCIK 478
Query: 582 TFPDLSGTGRATCVKFGPDAKYLAVGSMDRNLRVFGLPSE 463
T PDLSGTGRATCVKFGP++ Y+AVGSMD NLR+FGLP +
Sbjct: 479 TLPDLSGTGRATCVKFGPESNYIAVGSMDHNLRIFGLPED 518
>ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus communis]
gi|223532227|gb|EEF34031.1| Pre-mRNA-splicing factor,
putative [Ricinus communis]
Length = 531
Score = 834 bits (2154), Expect = 0.0
Identities = 408/531 (76%), Positives = 463/531 (87%), Gaps = 6/531 (1%)
Frame = -2
Query: 2022 MICAISGEVPEEPVVSKNSGLLFERRLIEHHIKDYGKCPVTGEPLSMDEIVPVKTNKVVK 1843
M C+ISGEVPEEPVVSK SGLLFE+RLIE HI DYGKCP+T EPL++D+IVP+K K+VK
Sbjct: 1 MHCSISGEVPEEPVVSKKSGLLFEKRLIERHISDYGKCPITSEPLTLDDIVPMKAGKIVK 60
Query: 1842 PRPLHAASIPGLLGIFQNEWDALMLSHFAVEQQLHTARQELSHALYQHDAACRVIARLKK 1663
PR + +ASIPG+LG+FQNEWD LMLS+FA+EQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61 PRTIQSASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
Query: 1662 ERDDARSLLAQAERQIPMXXXXXXXXXXXXXXNGKRAAEGEELGPSEKRFRPGISKDIID 1483
ERD+ARSLLAQA+RQIP+ NGKRAA ++LGP K+ RPGIS II
Sbjct: 121 ERDEARSLLAQADRQIPLSVTAAATENAYAASNGKRAAADDDLGPPGKKLRPGISATIIT 180
Query: 1482 ELTNCNTALSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKSSKQGILSIDIHPDKDILA 1303
ELT+CN ALSQQRKRRQIPSTLAP+D++ERYTQLSSHPLHK++K GI+S+DI KDI+A
Sbjct: 181 ELTDCNAALSQQRKRRQIPSTLAPVDAVERYTQLSSHPLHKTNKPGIVSMDIQYSKDIIA 240
Query: 1302 TGGADTNAVIFDRTSGQILSTLSGHSKKVNSVKFVSREELFVTGSADKTVRVWQGQEDGN 1123
TGG D+ AV+FDR SGQILSTLSGHSKKV SV+FV+ +LF+TGSADKTVRVWQG EDGN
Sbjct: 241 TGGVDSTAVLFDRPSGQILSTLSGHSKKVTSVRFVAEGDLFLTGSADKTVRVWQGSEDGN 300
Query: 1122 YTCRHILKDHTAEVQAVTIHATDNYFVTASLDNTWCFYDLSSGLCLAQV-----EATDTS 958
Y CRHILKDHTAEVQAVT+HAT+NYFVTASLD+TWCFYD+SSGLCLAQV TD+S
Sbjct: 301 YDCRHILKDHTAEVQAVTVHATNNYFVTASLDSTWCFYDISSGLCLAQVADSSKSDTDSS 360
Query: 957 GTEGYTSAAFHPDGLILGTGTSEAIVKIWDVKTQSNVAKFEGHTGAVTAISFSENGYFLA 778
EGYTSAAFHPDGLILGTGTS+A+VKIWDVK+Q+NVAKFEGH G VTAISFSENGYFLA
Sbjct: 361 SPEGYTSAAFHPDGLILGTGTSDAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLA 420
Query: 777 TAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNSVEFDHSGSYLAMGGSDVRVYQVGSVKSD 598
TAA+D VKLWDLRKL+NFRT + YDSDTPTNSVEFDHSG YL + GSD+RV+QV SVK+D
Sbjct: 421 TAAYDSVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHSGCYLGVAGSDIRVFQVASVKAD 480
Query: 597 WNCGKTFPDLSGTGRATCVKFGPDAKYLAVGSMDRNLRVFGLPS-ESQEES 448
WNC KT PDLSGTG+ATCVKFGPDAKY+AVGSMDRNLR+FGLP+ E Q ES
Sbjct: 481 WNCVKTLPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRIFGLPADEGQLES 531