BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000392
         (2441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]   725   0.0  
ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltran...   723   0.0  
ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltran...   702   0.0  
ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltran...   698   0.0  
ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, p...   694   0.0  

>emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]
          Length = 741

 Score =  725 bits (1871), Expect = 0.0
 Identities = 372/493 (75%), Positives = 409/493 (82%)
 Frame = +1

Query: 40   RKIDEKRAREQKDAEAELQLNIKEESDEFHLPTEEEIGAEALQPPDLSNLQRRIKEIVRI 219
            R IDE+RARE+++A AE+QLNIKEESDEF LPT+EE+  EA QPPDL NLQRRIKEIVR+
Sbjct: 120  RAIDEERAREEEEAGAEMQLNIKEESDEFRLPTKEELQEEARQPPDLPNLQRRIKEIVRV 179

Query: 220  LSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEFLIGVLVEMFPVVELLELIESYEKPRP 399
            LSNF +LRQEG  RKDYVEQL+ DL SYYGYNEFLIGVLVEMFPV+EL+ELIE++EKPRP
Sbjct: 180  LSNFNSLRQEGAQRKDYVEQLRVDLGSYYGYNEFLIGVLVEMFPVIELMELIEAFEKPRP 239

Query: 400  ICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQ 579
            ICLRTNTLK+RRRDLA+VL+NRGVN DPLSKWSKVGLVVYDSQVPIGATPEYMAG+YMLQ
Sbjct: 240  ICLRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQ 299

Query: 580  SASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNSGIIYANEMKEPRLKSLTANL 759
            SASSFLPVMALAPQEKER+VDMAAAPGGKTTYIAALMKNSG+I+ANEMKEPRLKSLTANL
Sbjct: 300  SASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGMIFANEMKEPRLKSLTANL 359

Query: 760  QRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDAPCSGTGVISKDESVKASKSFDDIQNS 939
             RMGVTNT+VCNYDGKELPKVLG NTVDRVLLDAPCSGTGVISKDESVK SKS +DIQ  
Sbjct: 360  HRMGVTNTVVCNYDGKELPKVLGHNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC 419

Query: 940  AFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRDVQLVPCGLDFG 1119
            A LQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKR+V+LVPCGLDFG
Sbjct: 420  AHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLDFG 479

Query: 1120 RPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLXXXXXXXXXXXXXEPAETVEHAP 1299
            RPGFTRFREHRFH SLEKTRRFYPHVHNMDGFFVAKL             EP+E  E AP
Sbjct: 480  RPGFTRFREHRFHQSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPNPTPSEPSEVEEQAP 539

Query: 1300 VPEGSRSNITQDEGMSQQSEAPSSPEKENDLIQAMKTMVKNGNSKPSETFEGTPPPNVRG 1479
                S S +   E  +QQ       +KEN  ++         N+ P    + +P    + 
Sbjct: 540  EENDSDSELNMGE-KTQQHPGKRGTKKENGGLK---------NAAPENGKKESPSTTTKR 589

Query: 1480 KNRNEEGEFELSE 1518
            K R      E+S+
Sbjct: 590  KKRKFPSREEISK 602


>ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like [Vitis
            vinifera]
          Length = 633

 Score =  723 bits (1867), Expect = 0.0
 Identities = 375/498 (75%), Positives = 410/498 (82%), Gaps = 5/498 (1%)
 Frame = +1

Query: 40   RKIDEKRAREQKDAEAELQLNIKEESDEFHLPTEEEIGAEALQPPDLSNLQRRIKEIVRI 219
            R IDE+RARE+++A AE+QLNIKEESDEF LPT+EE+  EA QPPDL NLQRRIKEIVR+
Sbjct: 118  RAIDEERAREEEEAGAEMQLNIKEESDEFRLPTKEELQEEARQPPDLPNLQRRIKEIVRV 177

Query: 220  LSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEFLIGVLVEMFPVVELLELIESYEKPRP 399
            LSNF +LRQEG  RKDYVEQL+ DL SYYGYNEFLIGVLVEMFPVVEL+ELIE++EKPRP
Sbjct: 178  LSNFNSLRQEGAQRKDYVEQLRVDLGSYYGYNEFLIGVLVEMFPVVELMELIEAFEKPRP 237

Query: 400  ICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQ 579
            ICLRTNTLK+RRRDLA+VL+NRGVN DPLSKWSKVGLVVYDSQVPIGATPEYMAG+YMLQ
Sbjct: 238  ICLRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQ 297

Query: 580  SASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNSGIIYANEMKEPRLKSLTANL 759
            SASSFLPVMALAPQEKER+VDMAAAPGGKTTYIAALMKN G+I+ANEMKEPRLKSLTANL
Sbjct: 298  SASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNGGMIFANEMKEPRLKSLTANL 357

Query: 760  QRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDAPCSGTGVISKDESVKASKSFDDIQNS 939
             RMGVTNT+VCNYDGKELPKVLG NTVDRVLLDAPCSGTGVISKDESVK SKS +DIQ  
Sbjct: 358  HRMGVTNTVVCNYDGKELPKVLGHNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC 417

Query: 940  AFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRDVQLVPCGLDFG 1119
            A LQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKR+V+LVPCGLDFG
Sbjct: 418  AHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLDFG 477

Query: 1120 RPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLXXXXXXXXXXXXXEPAETVEHAP 1299
            RPGFTRFREHRFH SLEKTRRFYPHVHNMDGFFVAKL             EP+E  E AP
Sbjct: 478  RPGFTRFREHRFHQSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPNPTPSEPSEVEEQAP 537

Query: 1300 VPEGSRSNITQDEGMSQQSEAPSSPEKENDLIQAMK--TMVKNG---NSKPSETFEGTPP 1464
                S S +   E  +QQ       +KE       K  T  +NG   N+ P    + +P 
Sbjct: 538  EENDSDSELNMGE-KTQQHPGKRGTKKEKTQQHPGKRGTKKENGGLKNAAPENGKKESPS 596

Query: 1465 PNVRGKNRNEEGEFELSE 1518
               + K R      E+S+
Sbjct: 597  TTTKRKKRKFPSREEISK 614


>ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
            [Glycine max]
          Length = 610

 Score =  702 bits (1811), Expect = 0.0
 Identities = 360/477 (75%), Positives = 399/477 (83%), Gaps = 3/477 (0%)
 Frame = +1

Query: 40   RKIDEKRAREQKDAEAELQLNIKEESDEFHLPTEEEIGAEALQPPDLSNLQRRIKEIVRI 219
            R IDE++ARE++DA+AE+QLNI +ESDEF LPT+EE+  EAL+PPDLSNLQRRIKEIVR+
Sbjct: 99   RAIDEEKAREEEDADAEMQLNINQESDEFRLPTKEELEDEALRPPDLSNLQRRIKEIVRV 158

Query: 220  LSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEFLIGVLVEMFPVVELLELIESYEKPRP 399
            LSNFK LRQ+G TRK+YVEQLK+DL +YYGYNEFLIG LVEMFPVVEL+ELIE++EKPRP
Sbjct: 159  LSNFKALRQDGSTRKEYVEQLKKDLCTYYGYNEFLIGALVEMFPVVELMELIEAFEKPRP 218

Query: 400  ICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQ 579
            +CLRTNTLK+RRRDLA+VLINRGVN DPLSKWSKVGLVVYDSQVPIGATPEYMAG+YMLQ
Sbjct: 219  MCLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQ 278

Query: 580  SASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNSGIIYANEMKEPRLKSLTANL 759
            SASSFLPVMALAPQEKERV+DMAAAPGGKTTYIAALMKN+GII+ANEMK PRLKSLT NL
Sbjct: 279  SASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTGNL 338

Query: 760  QRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDAPCSGTGVISKDESVKASKSFDDIQNS 939
             RMGV+NT+VCNYDGKELPKVLG N VDRVLLDAPCSGTGVISKDESVK SKS +DIQ  
Sbjct: 339  HRMGVSNTVVCNYDGKELPKVLGVNVVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC 398

Query: 940  AFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRDVQLVPCGLDFG 1119
            A LQK+LILAAIDMVDANSKSGGYIVYSTCSIM+ ENEAVIDYALKKRDV+LVPCGLDFG
Sbjct: 399  AHLQKELILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFG 458

Query: 1120 RPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLXXXXXXXXXXXXXEPAETVEHAP 1299
            RPGFTRFRE RFHPSLEKTRRFYPHV NMDGFFVAKL             E AE  E   
Sbjct: 459  RPGFTRFREQRFHPSLEKTRRFYPHVQNMDGFFVAKLKKMSSSKPGAKSSETAEKEEDTT 518

Query: 1300 --VPEGSRSNITQDEGMSQQSEAPSSPEKENDLIQAMKTMVKNG-NSKPSETFEGTP 1461
              V E  +S+     G+ +     S  E +N   +   +   NG   K  E+ E  P
Sbjct: 519  TFVEEKEKSSY----GIKENGNVSSESESKNGKKRKFPSKPSNGLKEKGKESSESEP 571


>ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
            [Glycine max]
          Length = 614

 Score =  698 bits (1802), Expect = 0.0
 Identities = 351/443 (79%), Positives = 388/443 (87%), Gaps = 3/443 (0%)
 Frame = +1

Query: 40   RKIDEKRAREQKDAEAELQLNIKEESDEFHLPTEEEIGAEALQPPDLSNLQRRIKEIVRI 219
            R IDE++A+E++DA+AE+QLNI +ESDEF LPT+EE+  EAL+PPDLSNLQRR KEIVR+
Sbjct: 105  RAIDEEKAKEEEDADAEMQLNINQESDEFRLPTKEELDEEALRPPDLSNLQRRTKEIVRV 164

Query: 220  LSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEFLIGVLVEMFPVVELLELIESYEKPRP 399
            LSNFK LRQ+G TRK+YVEQLK+DL +YYGYNEFLIG LVEMFPVVEL+ELIE++EKPRP
Sbjct: 165  LSNFKALRQDGSTRKEYVEQLKKDLCTYYGYNEFLIGALVEMFPVVELMELIEAFEKPRP 224

Query: 400  ICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQ 579
            ICLRTNTLK+RRRDLA+VLINRGVN DPLSKWSKVGLVVYDSQVPIGATPEYMAG+YMLQ
Sbjct: 225  ICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQ 284

Query: 580  SASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNSGIIYANEMKEPRLKSLTANL 759
            SASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKN+GII+ANEMK PRLKSLTANL
Sbjct: 285  SASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTANL 344

Query: 760  QRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDAPCSGTGVISKDESVKASKSFDDIQNS 939
             RMGV+NT+VCNYDGKELPKVLG N VDRVLLDAPCSGTGVISKDESVK SKS +DIQ  
Sbjct: 345  HRMGVSNTVVCNYDGKELPKVLGVNAVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC 404

Query: 940  AFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRDVQLVPCGLDFG 1119
            A LQK+LILAAIDMVDANSKSGGY+VYSTCSIM+ ENE+VIDYALKKRDV+LVPCGLDFG
Sbjct: 405  AHLQKELILAAIDMVDANSKSGGYVVYSTCSIMVAENESVIDYALKKRDVKLVPCGLDFG 464

Query: 1120 RPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLXXXXXXXXXXXXXEPAE---TVE 1290
            RPGFT+FRE RFHPSLEKTRRFYPHV NMDGFFVAKL             E AE   T  
Sbjct: 465  RPGFTKFREQRFHPSLEKTRRFYPHVQNMDGFFVAKLKKMSSSKPGAISSETAEKEDTTS 524

Query: 1291 HAPVPEGSRSNITQDEGMSQQSE 1359
                 E S   I ++  +S +SE
Sbjct: 525  FVEEKEKSSDGIKENGNVSSESE 547


>ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, putative [Ricinus
            communis] gi|223538025|gb|EEF39638.1| Proliferating-cell
            nucleolar antigen p120, putative [Ricinus communis]
          Length = 624

 Score =  694 bits (1791), Expect = 0.0
 Identities = 358/476 (75%), Positives = 393/476 (82%), Gaps = 3/476 (0%)
 Frame = +1

Query: 40   RKIDEKRAREQKDAEAELQLNIKEESDEFHLPTEEEIGAEALQPPDLSNLQRRIKEIVRI 219
            R ID ++ +E+KDAE EL+LNI EESDEF LPT+EE+  EA +PPDL NLQRRI+EIVR+
Sbjct: 115  RAIDAQKEQEEKDAEEELRLNINEESDEFRLPTKEELEDEARRPPDLQNLQRRIREIVRV 174

Query: 220  LSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEFLIGVLVEMFPVVELLELIESYEKPRP 399
            LSN K L+QEG  RKDYVEQLK DL SYYGYN+FLIGVLVEMFPV EL+ELIE+ EKPRP
Sbjct: 175  LSNLKDLKQEGARRKDYVEQLKMDLCSYYGYNDFLIGVLVEMFPVNELIELIEACEKPRP 234

Query: 400  ICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQ 579
            ICLRTNTLK+RRRDLA+VL+NRGVN DPLSKWSKVGLVVYDSQVPIGATPEYMAG+YMLQ
Sbjct: 235  ICLRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQ 294

Query: 580  SASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNSGIIYANEMKEPRLKSLTANL 759
            SA+SFLPVMALAPQEKER+VDMAAAPGGKTTYIAALMKNSGIIYANE+K PRLKSLTANL
Sbjct: 295  SANSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIYANEIKVPRLKSLTANL 354

Query: 760  QRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDAPCSGTGVISKDESVKASKSFDDIQNS 939
             RMGVTNTIVCNYDG+EL K+LG N VDRVLLDAPCSGTGVISKDESVK SKS DDIQ  
Sbjct: 355  HRMGVTNTIVCNYDGRELIKILGHNAVDRVLLDAPCSGTGVISKDESVKTSKSLDDIQKC 414

Query: 940  AFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALKKRDVQLVPCGLDFG 1119
            A LQKQLILAAIDMVDANSKSGGYIVYSTCS+M+ ENEAVIDYALKKRDV+LVPCGLDFG
Sbjct: 415  AHLQKQLILAAIDMVDANSKSGGYIVYSTCSMMVAENEAVIDYALKKRDVKLVPCGLDFG 474

Query: 1120 RPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLXXXXXXXXXXXXXEPAETVEHAP 1299
            RPGF RFREHRFHPSLEKTRRFYPHVHNMDGFFVAKL             EP E+VE A 
Sbjct: 475  RPGFIRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNSIPTAESSEPLESVEQAS 534

Query: 1300 VPEGSRSNITQDEGMSQQSEA---PSSPEKENDLIQAMKTMVKNGNSKPSETFEGT 1458
                S+S     E + ++S       + EK   L   +     NGN K +   + T
Sbjct: 535  ESNESKSEKNTAEPLKKKSVVKIEKGAREKGKGLSNGVS---DNGNVKSATAAKNT 587