BLASTX nr result

ID: Coptis24_contig00000384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000384
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458995.1| hypothetical protein SORBIDRAFT_03g043995 [S...   127   1e-27
ref|NP_001045218.1| Os01g0920200 [Oryza sativa Japonica Group] g...   126   2e-27
ref|XP_002298626.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|NP_001148745.1| LOC100282361 [Zea mays] gi|195621800|gb|ACG3...   125   4e-27
ref|XP_003564943.1| PREDICTED: enhancer of yellow 2 transcriptio...   124   6e-27

>ref|XP_002458995.1| hypothetical protein SORBIDRAFT_03g043995 [Sorghum bicolor]
           gi|241930970|gb|EES04115.1| hypothetical protein
           SORBIDRAFT_03g043995 [Sorghum bicolor]
          Length = 111

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = -2

Query: 269 SINRPPTPDAEEE-DEQLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSICRA 93
           SINRPPTP AEE+ D++ +L EIINIKL+ESG            L+ECGWRDEMK++CRA
Sbjct: 3   SINRPPTPSAEEDRDKEPSLGEIINIKLVESGEKEKLMELLRERLVECGWRDEMKALCRA 62

Query: 92  FTRKKGRNNVTVDELVHVITPKGRASVPDS 3
           + RKKGRNNVTVD+L+HVITPKGRASVPDS
Sbjct: 63  YARKKGRNNVTVDDLIHVITPKGRASVPDS 92


>ref|NP_001045218.1| Os01g0920200 [Oryza sativa Japonica Group]
           gi|113534749|dbj|BAF07132.1| Os01g0920200 [Oryza sativa
           Japonica Group] gi|215767677|dbj|BAG99905.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 113

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -2

Query: 269 SINRPPTPDAEEEDE-QLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSICRA 93
           SINRPPTP+ EE+ + +L+L+EIIN+KL+ESG            L+ECGWRDEMK++CRA
Sbjct: 4   SINRPPTPNREEDPQKELSLREIINVKLVESGEKEKLMELLRERLVECGWRDEMKALCRA 63

Query: 92  FTRKKGRNNVTVDELVHVITPKGRASVPDS 3
           + RKKGRNNVTVD+L+HVITPKGRASVPDS
Sbjct: 64  YARKKGRNNVTVDDLIHVITPKGRASVPDS 93


>ref|XP_002298626.1| predicted protein [Populus trichocarpa] gi|222845884|gb|EEE83431.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/91 (68%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269 SINRPPTPD--AEEEDEQLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSICR 96
           ++NRPPTPD  AEEE++Q TL E INIKLIESG            LIECGW+DEMK++CR
Sbjct: 4   NMNRPPTPDDTAEEEEKQPTLHETINIKLIESGEKERLTELLRERLIECGWKDEMKALCR 63

Query: 95  AFTRKKGRNNVTVDELVHVITPKGRASVPDS 3
           AF +KKGRNNVTVD+LVHVITPKGR S+PDS
Sbjct: 64  AFIKKKGRNNVTVDDLVHVITPKGRVSIPDS 94


>ref|NP_001148745.1| LOC100282361 [Zea mays] gi|195621800|gb|ACG32730.1| e2 protein
           isoform 5 [Zea mays] gi|413951502|gb|AFW84151.1| E2
           protein isoform 5 [Zea mays]
          Length = 112

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = -2

Query: 269 SINRPPTPDAEEE-DEQLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSICRA 93
           SINRPPTP AEE+ D+Q +L EIINIKL+E+G            L ECGWRDEMK++CRA
Sbjct: 4   SINRPPTPSAEEDRDKQPSLGEIINIKLVETGEKEKLMELLRERLAECGWRDEMKALCRA 63

Query: 92  FTRKKGRNNVTVDELVHVITPKGRASVPDS 3
           + RKKGRNNVTVD+L+HVITPKGRASVPDS
Sbjct: 64  YARKKGRNNVTVDDLIHVITPKGRASVPDS 93


>ref|XP_003564943.1| PREDICTED: enhancer of yellow 2 transcription factor homolog
           [Brachypodium distachyon]
          Length = 114

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/91 (65%), Positives = 73/91 (80%), Gaps = 3/91 (3%)
 Frame = -2

Query: 269 SINRPPTPDAEEEDEQ---LTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSIC 99
           SINRPPTP+ EEED++    +L+EIIN+KL+ESG            LIECGWRD+MK++C
Sbjct: 4   SINRPPTPNQEEEDKEGKEASLREIINLKLVESGEKERLMELLRERLIECGWRDDMKALC 63

Query: 98  RAFTRKKGRNNVTVDELVHVITPKGRASVPD 6
           RA+ RKKGRNNVTVD+L+HVITPKGRASVPD
Sbjct: 64  RAYARKKGRNNVTVDDLIHVITPKGRASVPD 94


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