BLASTX nr result
ID: Coptis24_contig00000376
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000376 (2630 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius] 89 5e-15 gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group] 89 6e-15 gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group] 89 6e-15 ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group] g... 89 6e-15 gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Ja... 89 6e-15 >emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius] Length = 168 Score = 89.4 bits (220), Expect = 5e-15 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = +3 Query: 558 IISDRETGRSRGFGFVTFSSEQAMREAIENMNGQELDGRNITVNEAQ 698 II+DRETGRSRGFGFVTFSSEQAMR+AIE MNGQ+LDGRNITVNEAQ Sbjct: 38 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQ 84 Score = 65.9 bits (159), Expect = 5e-08 Identities = 29/36 (80%), Positives = 33/36 (91%) Frame = +3 Query: 168 ADVEYRCFVGGLAWATDDVSLEKAFSVYGDILESKV 275 A+VEYRCFVGGLAWATDD SLE+AFS YG +LESK+ Sbjct: 3 AEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKI 38 >gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group] Length = 161 Score = 89.0 bits (219), Expect = 6e-15 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = +3 Query: 558 IISDRETGRSRGFGFVTFSSEQAMREAIENMNGQELDGRNITVNEAQ 698 II+DRETGRSRGFGFVTFSSEQAMR+AIE MNG+ELDGRNITVNEAQ Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQ 85 Score = 67.0 bits (162), Expect = 2e-08 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = +3 Query: 159 MASADVEYRCFVGGLAWATDDVSLEKAFSVYGDILESKV 275 MA+ DV+YRCFVGGLAWATD+ SLE AFS YG+ILESK+ Sbjct: 1 MAAPDVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKI 39 >gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group] Length = 161 Score = 89.0 bits (219), Expect = 6e-15 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = +3 Query: 558 IISDRETGRSRGFGFVTFSSEQAMREAIENMNGQELDGRNITVNEAQ 698 II+DRETGRSRGFGFVTFSSEQAMR+AIE MNG+ELDGRNITVNEAQ Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQ 85 Score = 70.1 bits (170), Expect = 3e-09 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = +3 Query: 159 MASADVEYRCFVGGLAWATDDVSLEKAFSVYGDILESKV 275 MA+ DVEYRCFVGGLAWATDD SLE AFS YG+ILESK+ Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKI 39 >ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group] gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza sativa Japonica Group] gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group] gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group] gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group] Length = 162 Score = 89.0 bits (219), Expect = 6e-15 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = +3 Query: 558 IISDRETGRSRGFGFVTFSSEQAMREAIENMNGQELDGRNITVNEAQ 698 II+DRETGRSRGFGFVTFSSEQAMR+AIE MNG+ELDGRNITVNEAQ Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQ 85 Score = 68.6 bits (166), Expect = 8e-09 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = +3 Query: 159 MASADVEYRCFVGGLAWATDDVSLEKAFSVYGDILESKV 275 MA+ DVEYRCFVGGLAWATDD SLE AFS +G+ILESK+ Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKI 39 >gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group] gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group] gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa] Length = 161 Score = 89.0 bits (219), Expect = 6e-15 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = +3 Query: 558 IISDRETGRSRGFGFVTFSSEQAMREAIENMNGQELDGRNITVNEAQ 698 II+DRETGRSRGFGFVTFSSEQAMR+AIE MNG+ELDGRNITVNEAQ Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQ 85 Score = 70.1 bits (170), Expect = 3e-09 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = +3 Query: 159 MASADVEYRCFVGGLAWATDDVSLEKAFSVYGDILESKV 275 MA+ DVEYRCFVGGLAWATDD SLE AFS YG+ILESK+ Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKI 39