BLASTX nr result

ID: Coptis24_contig00000372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000372
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vini...   184   1e-44
gb|ABC01897.1| protein transport SEC13-like protein [Solanum tub...   184   1e-44
emb|CAN79974.1| hypothetical protein VITISV_009154 [Vitis vinifera]   184   1e-44
emb|CAN63472.1| hypothetical protein VITISV_000787 [Vitis vinifera]   184   1e-44
ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]    184   2e-44

>ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vinifera]
           gi|147809687|emb|CAN73348.1| hypothetical protein
           VITISV_040760 [Vitis vinifera]
          Length = 301

 Score =  184 bits (468), Expect = 1e-44
 Identities = 85/105 (80%), Positives = 93/105 (88%)
 Frame = +3

Query: 366 GRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPRELGLVLACGSSDGNISVFTAGADGG 545
           GRVIIWKEGNQNEW+QAHVFS+HK SVNSI WAP ELGL LACGSSDGNISVFTA +DG 
Sbjct: 79  GRVIIWKEGNQNEWTQAHVFSDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARSDGT 138

Query: 546 WDTNRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVSGGC 680
           WDT +I QAHP GVTSVSWAP++APGA VG+G L+PV KLVSGGC
Sbjct: 139 WDTTKIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLVSGGC 183



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 45/54 (83%), Positives = 48/54 (88%)
 Frame = +1

Query: 73  MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVNGTASQHLATLSGH 234
           MP QKIETGH DTVHDV MDYYGKR+ATASSDTTIKI+GV+  ASQHLATL GH
Sbjct: 1   MPSQKIETGHQDTVHDVAMDYYGKRVATASSDTTIKIIGVSNNASQHLATLIGH 54


>gb|ABC01897.1| protein transport SEC13-like protein [Solanum tuberosum]
          Length = 303

 Score =  184 bits (467), Expect = 1e-44
 Identities = 86/105 (81%), Positives = 91/105 (86%)
 Frame = +3

Query: 366 GRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPRELGLVLACGSSDGNISVFTAGADGG 545
           G+VIIWKEGNQNEW+QAHVFSEHK SVNSI WAP ELGL LACGSSDGNISV TA +DGG
Sbjct: 80  GKVIIWKEGNQNEWTQAHVFSEHKSSVNSISWAPHELGLCLACGSSDGNISVHTARSDGG 139

Query: 546 WDTNRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVSGGC 680
           WDT RI QAHP GVTSVSWAP++APGA VG G LEPV KL SGGC
Sbjct: 140 WDTTRIDQAHPVGVTSVSWAPSMAPGALVGAGVLEPVQKLASGGC 184



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/55 (83%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
 Frame = +1

Query: 73  MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGV-NGTASQHLATLSGH 234
           MP QKIETGH DTVHDV MDYYGKR+ATASSDTTIKI GV N   SQHLATLSGH
Sbjct: 1   MPAQKIETGHNDTVHDVTMDYYGKRVATASSDTTIKITGVSNNATSQHLATLSGH 55


>emb|CAN79974.1| hypothetical protein VITISV_009154 [Vitis vinifera]
          Length = 312

 Score =  184 bits (467), Expect = 1e-44
 Identities = 84/105 (80%), Positives = 93/105 (88%)
 Frame = +3

Query: 366 GRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPRELGLVLACGSSDGNISVFTAGADGG 545
           GRVIIWKEGNQN+W+QAHVFS+HK SVNSI WAP ELGL LACGSSDGNISVFTA +DG 
Sbjct: 79  GRVIIWKEGNQNDWTQAHVFSDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARSDGA 138

Query: 546 WDTNRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVSGGC 680
           WDT +I QAHP GVTSVSWAP++APGA VG+G L+PV KLVSGGC
Sbjct: 139 WDTTKIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLVSGGC 183



 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = +1

Query: 73  MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVNGTASQHLATLSGH 234
           MP QKI+TGH DTVHDV MDYYGKR+ATASSD+TIKI+GV+  ASQHL+TL+GH
Sbjct: 1   MPSQKIKTGHQDTVHDVAMDYYGKRVATASSDSTIKIIGVSNNASQHLSTLTGH 54


>emb|CAN63472.1| hypothetical protein VITISV_000787 [Vitis vinifera]
          Length = 313

 Score =  184 bits (467), Expect = 1e-44
 Identities = 84/105 (80%), Positives = 93/105 (88%)
 Frame = +3

Query: 366 GRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPRELGLVLACGSSDGNISVFTAGADGG 545
           GRVIIWKEGNQN+W+QAHVFS+HK SVNSI WAP ELGL LACGSSDGNISVFTA +DG 
Sbjct: 79  GRVIIWKEGNQNDWTQAHVFSDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARSDGA 138

Query: 546 WDTNRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVSGGC 680
           WDT +I QAHP GVTSVSWAP++APGA VG+G L+PV KLVSGGC
Sbjct: 139 WDTTKIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLVSGGC 183



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 42/54 (77%), Positives = 48/54 (88%)
 Frame = +1

Query: 73  MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVNGTASQHLATLSGH 234
           MP QKI+TGH DTVHDV MDYYGKR+ATASSD+T KI+GV+  ASQHLATL+GH
Sbjct: 1   MPSQKIKTGHQDTVHDVAMDYYGKRVATASSDSTXKIIGVSNNASQHLATLTGH 54


>ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  184 bits (466), Expect = 2e-44
 Identities = 84/105 (80%), Positives = 91/105 (86%)
 Frame = +3

Query: 366 GRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPRELGLVLACGSSDGNISVFTAGADGG 545
           GRVI+WKEGNQNEW+QAHVF +HK SVNS+ WAP ELGL LACGSSDGNISVFTA ADGG
Sbjct: 79  GRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLACGSSDGNISVFTARADGG 138

Query: 546 WDTNRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVSGGC 680
           WDT RI QAHP GVTSVSWAP++APGA VG G L+PV KL SGGC
Sbjct: 139 WDTARIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCSGGC 183



 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = +1

Query: 73  MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVNGTASQHLATLSGH 234
           MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GV+ TASQHLATL+GH
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGH 54


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