BLASTX nr result

ID: Coptis24_contig00000371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000371
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max]    410   e-112
dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515...   410   e-112
ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vini...   410   e-112
ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]    409   e-112
gb|ACU20139.1| unknown [Glycine max]                                  407   e-111

>ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  410 bits (1053), Expect = e-112
 Identities = 186/223 (83%), Positives = 201/223 (90%)
 Frame = -3

Query: 669 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATLSGHQGPVWQ 490
           MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQH ATL+GHQGPVWQ
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 489 VAWAHPKFGSLLASCSYDGRVIIWNEGNRNEWSQAHVFSEHKVSVNSICWAPHELGLVLA 310
           VAWAHPKFGSLLASCSYDGRVI+W EGN+NEW+QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLA 120

Query: 309 CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFIGNGSLEPVTKLVS 130
           CGSSDGNISV TA ADGGWDT RI QAHP GVTSVSWAP++APGA +G G L+PV KL S
Sbjct: 121 CGSSDGNISVLTARADGGWDTVRIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 129 GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGL 1
           GGCDNTVKVWKL NG+WKMDCFPAL MHTDWVRDVAWAPNLGL
Sbjct: 181 GGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGL 223


>dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515669|gb|AFK45896.1|
           unknown [Lotus japonicus]
          Length = 301

 Score =  410 bits (1053), Expect = e-112
 Identities = 187/223 (83%), Positives = 202/223 (90%)
 Frame = -3

Query: 669 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATLSGHQGPVWQ 490
           MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQH ATL+GHQGPVWQ
Sbjct: 1   MPAQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLAGHQGPVWQ 60

Query: 489 VAWAHPKFGSLLASCSYDGRVIIWNEGNRNEWSQAHVFSEHKVSVNSICWAPHELGLVLA 310
           VAWAHPKFGS++ASCSYDGRVIIW EGN+NEW QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61  VAWAHPKFGSMIASCSYDGRVIIWKEGNQNEWIQAHVFDDHKSSVNSVVWAPHELGLCLA 120

Query: 309 CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFIGNGSLEPVTKLVS 130
           CGSSDGNISVFTA ADGGWDT+RI QAHP GVTSVSWAP++APGA +G G L+PV KL S
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 129 GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGL 1
           GGCDNTVKVWKLTNG WKMDCFPAL MHTDWVRDVAWAPNLGL
Sbjct: 181 GGCDNTVKVWKLTNGNWKMDCFPALHMHTDWVRDVAWAPNLGL 223


>ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vinifera]
           gi|147809687|emb|CAN73348.1| hypothetical protein
           VITISV_040760 [Vitis vinifera]
          Length = 301

 Score =  410 bits (1053), Expect = e-112
 Identities = 188/223 (84%), Positives = 202/223 (90%)
 Frame = -3

Query: 669 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATLSGHQGPVWQ 490
           MP QKIETGH DTVHDV MDYYGKR+ATASSDTTIKI+GVS+ ASQH ATL GHQGPVWQ
Sbjct: 1   MPSQKIETGHQDTVHDVAMDYYGKRVATASSDTTIKIIGVSNNASQHLATLIGHQGPVWQ 60

Query: 489 VAWAHPKFGSLLASCSYDGRVIIWNEGNRNEWSQAHVFSEHKVSVNSICWAPHELGLVLA 310
           V WAHPKFGS+LASCSYDGRVIIW EGN+NEW+QAHVFS+HK SVNSI WAPHELGL LA
Sbjct: 61  VVWAHPKFGSILASCSYDGRVIIWKEGNQNEWTQAHVFSDHKSSVNSIAWAPHELGLCLA 120

Query: 309 CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFIGNGSLEPVTKLVS 130
           CGSSDGNISVFTA +DG WDTT+I QAHP GVTSVSWAP++APGA +G+G L+PV KLVS
Sbjct: 121 CGSSDGNISVFTARSDGTWDTTKIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLVS 180

Query: 129 GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGL 1
           GGCDNTVKVWKL NG WKMDCFPAL MHTDWVRDVAWAPNLGL
Sbjct: 181 GGCDNTVKVWKLYNGNWKMDCFPALQMHTDWVRDVAWAPNLGL 223


>ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  409 bits (1051), Expect = e-112
 Identities = 185/223 (82%), Positives = 201/223 (90%)
 Frame = -3

Query: 669 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATLSGHQGPVWQ 490
           MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQH ATL+GHQGPVWQ
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 489 VAWAHPKFGSLLASCSYDGRVIIWNEGNRNEWSQAHVFSEHKVSVNSICWAPHELGLVLA 310
           V WAHPKFGSLLASCS+DGRVI+W EGN+NEW+QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61  VVWAHPKFGSLLASCSFDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLA 120

Query: 309 CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFIGNGSLEPVTKLVS 130
           CGSSDGNISVFTA ADGGWDT RI QAHP GVTSVSWAP++APGA +G G L+PV KL S
Sbjct: 121 CGSSDGNISVFTARADGGWDTARIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 129 GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGL 1
           GGCDNTVKVWKL NG+WKMDCFPAL MHTDWVRDVAWAPNLGL
Sbjct: 181 GGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGL 223


>gb|ACU20139.1| unknown [Glycine max]
          Length = 301

 Score =  407 bits (1047), Expect = e-111
 Identities = 185/223 (82%), Positives = 200/223 (89%)
 Frame = -3

Query: 669 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATLSGHQGPVWQ 490
           MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQH ATL+GHQGPVWQ
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 489 VAWAHPKFGSLLASCSYDGRVIIWNEGNRNEWSQAHVFSEHKVSVNSICWAPHELGLVLA 310
           VAWAHPKFGSLLASCSYDGRVI+W EGN+NEW+QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLA 120

Query: 309 CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFIGNGSLEPVTKLVS 130
           CGSSDGNISV TA ADGGWDT  I QAHP GVTSVSWAP++APGA +G G L+PV KL S
Sbjct: 121 CGSSDGNISVLTARADGGWDTVSIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 129 GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGL 1
           GGCDNTVKVWKL NG+WKMDCFPAL MHTDWVRDVAWAPNLGL
Sbjct: 181 GGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGL 223


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