BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000365
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310552.1| predicted protein [Populus trichocarpa] gi|2...   300   5e-95
ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [...   302   4e-94
ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis...   296   1e-93
ref|XP_002307071.1| predicted protein [Populus trichocarpa] gi|1...   295   1e-93
dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]                          298   2e-93

>ref|XP_002310552.1| predicted protein [Populus trichocarpa] gi|222853455|gb|EEE91002.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  300 bits (767), Expect(2) = 5e-95
 Identities = 158/195 (81%), Positives = 167/195 (85%)
 Frame = +3

Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455
           GYGDA+   QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ       
Sbjct: 6   GYGDAS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55

Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635
                           TRTLVI HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI
Sbjct: 56  ----------------TRTLVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI 99

Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815
           TKRQTFDHIPRWLEELR+HADKNIVIILIGNKSDLE+QRAVPTEDAKEFAQKEGLFFLET
Sbjct: 100 TKRQTFDHIPRWLEELRNHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAQKEGLFFLET 159

Query: 816 SALEATNVENAFSTI 860
           SAL+ATNVENAF T+
Sbjct: 160 SALQATNVENAFMTV 174



 Score = 76.3 bits (186), Expect(2) = 5e-95
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +1

Query: 934  FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071
            F T+LTEIFNIVNKK LVAGE+Q NGN ASL+GKKI+IPGPAQ +P
Sbjct: 171  FMTVLTEIFNIVNKKNLVAGEDQINGNPASLSGKKIIIPGPAQEIP 216


>ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
           gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related
           protein Rab11A-like [Cucumis sativus]
          Length = 226

 Score =  302 bits (774), Expect(2) = 4e-94
 Identities = 160/195 (82%), Positives = 167/195 (85%)
 Frame = +3

Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455
           GYGDA    QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ       
Sbjct: 6   GYGDA---NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55

Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635
                           TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI
Sbjct: 56  ----------------TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 99

Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815
           TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLE+QRAVPTEDAKEFA+KEGLFFLET
Sbjct: 100 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLET 159

Query: 816 SALEATNVENAFSTI 860
           SALE+TNVENAF T+
Sbjct: 160 SALESTNVENAFMTV 174



 Score = 70.5 bits (171), Expect(2) = 4e-94
 Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = +1

Query: 934  FSTILTEIFNIVNKKTLVAGEEQGNGNQASLA-GKKILIPGPAQVVP 1071
            F T+LTEIF+I+N+K L AGE QGNGN ASLA GKKI+IPGPAQ +P
Sbjct: 171  FMTVLTEIFSIMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIP 217


>ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
           gi|147811153|emb|CAN70163.1| hypothetical protein
           VITISV_039255 [Vitis vinifera]
          Length = 226

 Score =  296 bits (759), Expect(2) = 1e-93
 Identities = 156/195 (80%), Positives = 166/195 (85%)
 Frame = +3

Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455
           GYGD++   QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ       
Sbjct: 6   GYGDSS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55

Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635
                           TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI
Sbjct: 56  ----------------TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI 99

Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815
           TKRQ+FDHIPRWLEELR HADKNIVIILIGNK+DLE QRAVPTEDAKEFA+KEGLFFLET
Sbjct: 100 TKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLET 159

Query: 816 SALEATNVENAFSTI 860
           SALEATNVENAF T+
Sbjct: 160 SALEATNVENAFLTV 174



 Score = 74.7 bits (182), Expect(2) = 1e-93
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +1

Query: 934  FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071
            F T+LTEIFNIVNKK LVAGE+Q NGN ASL GK+I IPGPAQ +P
Sbjct: 171  FLTVLTEIFNIVNKKNLVAGEDQANGNPASLTGKRITIPGPAQEIP 216


>ref|XP_002307071.1| predicted protein [Populus trichocarpa] gi|118482292|gb|ABK93073.1|
           unknown [Populus trichocarpa]
           gi|222856520|gb|EEE94067.1| predicted protein [Populus
           trichocarpa]
          Length = 223

 Score =  295 bits (755), Expect(2) = 1e-93
 Identities = 156/195 (80%), Positives = 165/195 (84%)
 Frame = +3

Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455
           GYGDA+   QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ       
Sbjct: 6   GYGDAS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55

Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635
                           TRTLVI HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI
Sbjct: 56  ----------------TRTLVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI 99

Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815
           TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLE+QRAVPTED  EFAQKEGLFFLET
Sbjct: 100 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVPTEDVNEFAQKEGLFFLET 159

Query: 816 SALEATNVENAFSTI 860
           SAL+ATNVE+AF T+
Sbjct: 160 SALQATNVESAFMTL 174



 Score = 76.3 bits (186), Expect(2) = 1e-93
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = +1

Query: 934  FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071
            F T+LTEIFNIVNKK L+AGE Q NGN ASL+GKKI+IPGPAQ +P
Sbjct: 171  FMTLLTEIFNIVNKKNLIAGENQSNGNPASLSGKKIIIPGPAQEIP 216


>dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
          Length = 222

 Score =  298 bits (762), Expect(2) = 2e-93
 Identities = 156/196 (79%), Positives = 169/196 (86%)
 Frame = +3

Query: 273 SGYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXX 452
           SGYGDA+   QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ      
Sbjct: 3   SGYGDAS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------ 53

Query: 453 XXXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYD 632
                            TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD
Sbjct: 54  -----------------TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD 96

Query: 633 ITKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLE 812
           ITKRQTFDHIPRWLEELR+HAD+NIVI+LIGNK+DLE+QRAVPTEDAKEFAQKEGLFFLE
Sbjct: 97  ITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLE 156

Query: 813 TSALEATNVENAFSTI 860
           TSA+EATNVE+AF T+
Sbjct: 157 TSAMEATNVEDAFLTV 172



 Score = 73.2 bits (178), Expect(2) = 2e-93
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = +1

Query: 934  FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071
            F T+LTEIFNIVNKK L A E Q NGN ASL GKKIL+PGP QV+P
Sbjct: 169  FLTVLTEIFNIVNKKNLAADENQSNGNPASLTGKKILVPGPGQVIP 214