BLASTX nr result
ID: Coptis24_contig00000365
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000365 (1316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310552.1| predicted protein [Populus trichocarpa] gi|2... 300 5e-95 ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [... 302 4e-94 ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis... 296 1e-93 ref|XP_002307071.1| predicted protein [Populus trichocarpa] gi|1... 295 1e-93 dbj|BAH37015.1| NtRab11D [Nicotiana tabacum] 298 2e-93 >ref|XP_002310552.1| predicted protein [Populus trichocarpa] gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa] Length = 223 Score = 300 bits (767), Expect(2) = 5e-95 Identities = 158/195 (81%), Positives = 167/195 (85%) Frame = +3 Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455 GYGDA+ QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ Sbjct: 6 GYGDAS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55 Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635 TRTLVI HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI Sbjct: 56 ----------------TRTLVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI 99 Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815 TKRQTFDHIPRWLEELR+HADKNIVIILIGNKSDLE+QRAVPTEDAKEFAQKEGLFFLET Sbjct: 100 TKRQTFDHIPRWLEELRNHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAQKEGLFFLET 159 Query: 816 SALEATNVENAFSTI 860 SAL+ATNVENAF T+ Sbjct: 160 SALQATNVENAFMTV 174 Score = 76.3 bits (186), Expect(2) = 5e-95 Identities = 36/46 (78%), Positives = 41/46 (89%) Frame = +1 Query: 934 FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071 F T+LTEIFNIVNKK LVAGE+Q NGN ASL+GKKI+IPGPAQ +P Sbjct: 171 FMTVLTEIFNIVNKKNLVAGEDQINGNPASLSGKKIIIPGPAQEIP 216 >ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus] gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus] Length = 226 Score = 302 bits (774), Expect(2) = 4e-94 Identities = 160/195 (82%), Positives = 167/195 (85%) Frame = +3 Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455 GYGDA QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ Sbjct: 6 GYGDA---NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55 Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635 TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI Sbjct: 56 ----------------TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 99 Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLE+QRAVPTEDAKEFA+KEGLFFLET Sbjct: 100 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLET 159 Query: 816 SALEATNVENAFSTI 860 SALE+TNVENAF T+ Sbjct: 160 SALESTNVENAFMTV 174 Score = 70.5 bits (171), Expect(2) = 4e-94 Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 1/47 (2%) Frame = +1 Query: 934 FSTILTEIFNIVNKKTLVAGEEQGNGNQASLA-GKKILIPGPAQVVP 1071 F T+LTEIF+I+N+K L AGE QGNGN ASLA GKKI+IPGPAQ +P Sbjct: 171 FMTVLTEIFSIMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIP 217 >ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera] gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera] Length = 226 Score = 296 bits (759), Expect(2) = 1e-93 Identities = 156/195 (80%), Positives = 166/195 (85%) Frame = +3 Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455 GYGD++ QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ Sbjct: 6 GYGDSS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55 Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635 TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI Sbjct: 56 ----------------TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI 99 Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815 TKRQ+FDHIPRWLEELR HADKNIVIILIGNK+DLE QRAVPTEDAKEFA+KEGLFFLET Sbjct: 100 TKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLET 159 Query: 816 SALEATNVENAFSTI 860 SALEATNVENAF T+ Sbjct: 160 SALEATNVENAFLTV 174 Score = 74.7 bits (182), Expect(2) = 1e-93 Identities = 35/46 (76%), Positives = 39/46 (84%) Frame = +1 Query: 934 FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071 F T+LTEIFNIVNKK LVAGE+Q NGN ASL GK+I IPGPAQ +P Sbjct: 171 FLTVLTEIFNIVNKKNLVAGEDQANGNPASLTGKRITIPGPAQEIP 216 >ref|XP_002307071.1| predicted protein [Populus trichocarpa] gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa] gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa] Length = 223 Score = 295 bits (755), Expect(2) = 1e-93 Identities = 156/195 (80%), Positives = 165/195 (84%) Frame = +3 Query: 276 GYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXXX 455 GYGDA+ QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ Sbjct: 6 GYGDAS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------- 55 Query: 456 XXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDI 635 TRTLVI HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDI Sbjct: 56 ----------------TRTLVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI 99 Query: 636 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLET 815 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLE+QRAVPTED EFAQKEGLFFLET Sbjct: 100 TKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVPTEDVNEFAQKEGLFFLET 159 Query: 816 SALEATNVENAFSTI 860 SAL+ATNVE+AF T+ Sbjct: 160 SALQATNVESAFMTL 174 Score = 76.3 bits (186), Expect(2) = 1e-93 Identities = 35/46 (76%), Positives = 40/46 (86%) Frame = +1 Query: 934 FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071 F T+LTEIFNIVNKK L+AGE Q NGN ASL+GKKI+IPGPAQ +P Sbjct: 171 FMTLLTEIFNIVNKKNLIAGENQSNGNPASLSGKKIIIPGPAQEIP 216 >dbj|BAH37015.1| NtRab11D [Nicotiana tabacum] Length = 222 Score = 298 bits (762), Expect(2) = 2e-93 Identities = 156/196 (79%), Positives = 169/196 (86%) Frame = +3 Query: 273 SGYGDAAGGQQKIDYVFKIVLIGDSAVGKSQILSRFARNEFTLDSKATIGVEFQTXXXXX 452 SGYGDA+ QKIDYVFK+VLIGDSAVGKSQIL+RFARNEF+LDSKATIGVEFQ Sbjct: 3 SGYGDAS---QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQ------ 53 Query: 453 XXXXXXXXXXXIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYD 632 TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD Sbjct: 54 -----------------TRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD 96 Query: 633 ITKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLENQRAVPTEDAKEFAQKEGLFFLE 812 ITKRQTFDHIPRWLEELR+HAD+NIVI+LIGNK+DLE+QRAVPTEDAKEFAQKEGLFFLE Sbjct: 97 ITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLE 156 Query: 813 TSALEATNVENAFSTI 860 TSA+EATNVE+AF T+ Sbjct: 157 TSAMEATNVEDAFLTV 172 Score = 73.2 bits (178), Expect(2) = 2e-93 Identities = 34/46 (73%), Positives = 37/46 (80%) Frame = +1 Query: 934 FSTILTEIFNIVNKKTLVAGEEQGNGNQASLAGKKILIPGPAQVVP 1071 F T+LTEIFNIVNKK L A E Q NGN ASL GKKIL+PGP QV+P Sbjct: 169 FLTVLTEIFNIVNKKNLAADENQSNGNPASLTGKKILVPGPGQVIP 214