BLASTX nr result

ID: Coptis24_contig00000362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000362
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinif...   115   4e-24
sp|P51614.1|CHIT3_VITVI RecName: Full=Acidic endochitinase; Flag...   114   8e-24
gb|ABF82271.1| class III chitinase [Panax ginseng]                    114   1e-23
ref|XP_002264903.1| PREDICTED: acidic endochitinase-like [Vitis ...   113   1e-23
gb|ACH54087.1| class III chitinase [Vitis vinifera]                   113   1e-23

>ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinifera]
          Length = 297

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/71 (77%), Positives = 66/71 (92%)
 Frame = -1

Query: 385 NRWTSTIPATKIFMGLPAATGAAGSGFIPANVLTSQVLPAIRTSAKYGGVMLWNKYFDDQ 206
           NRWTS+I + +IFMGLPA++ AAGSGFIPANVLTSQ+LP I+ SAKYGGVMLW+KY+DDQ
Sbjct: 228 NRWTSSINS-RIFMGLPASSAAAGSGFIPANVLTSQILPVIKRSAKYGGVMLWSKYYDDQ 286

Query: 205 SGYSSNIRSSV 173
           SGYSS+I+SSV
Sbjct: 287 SGYSSSIKSSV 297


>sp|P51614.1|CHIT3_VITVI RecName: Full=Acidic endochitinase; Flags: Precursor
           gi|1150686|emb|CAA92207.1| acidic chitinase [Vitis
           vinifera]
          Length = 301

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/71 (74%), Positives = 63/71 (88%)
 Frame = -1

Query: 385 NRWTSTIPATKIFMGLPAATGAAGSGFIPANVLTSQVLPAIRTSAKYGGVMLWNKYFDDQ 206
           NRWTS+I +T  FMGLPA++ AAG GFIPANVLTSQ+LP I+ S KYGGVMLW+KY+DDQ
Sbjct: 231 NRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQ 290

Query: 205 SGYSSNIRSSV 173
           SGYSS+I+SSV
Sbjct: 291 SGYSSSIKSSV 301


>gb|ABF82271.1| class III chitinase [Panax ginseng]
          Length = 298

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/70 (77%), Positives = 63/70 (90%)
 Frame = -1

Query: 382 RWTSTIPATKIFMGLPAATGAAGSGFIPANVLTSQVLPAIRTSAKYGGVMLWNKYFDDQS 203
           +WTS IPA KIF+GLPAA  AAGSGFIPA+ LTSQVLPAI+ S+KYGGVMLW+KY+DDQS
Sbjct: 229 QWTSDIPAKKIFLGLPAAPDAAGSGFIPASDLTSQVLPAIKGSSKYGGVMLWSKYYDDQS 288

Query: 202 GYSSNIRSSV 173
           GYSS+I+S V
Sbjct: 289 GYSSSIKSDV 298


>ref|XP_002264903.1| PREDICTED: acidic endochitinase-like [Vitis vinifera]
          Length = 297

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/71 (76%), Positives = 64/71 (90%)
 Frame = -1

Query: 385 NRWTSTIPATKIFMGLPAATGAAGSGFIPANVLTSQVLPAIRTSAKYGGVMLWNKYFDDQ 206
           NRWTS+I + +IF+GLPAA+ AAGSGFIP NVLTSQ+LP I+TS KYGGVMLW+KY+DDQ
Sbjct: 228 NRWTSSINS-RIFLGLPAASAAAGSGFIPPNVLTSQILPVIKTSPKYGGVMLWSKYYDDQ 286

Query: 205 SGYSSNIRSSV 173
           SGYSS I+SSV
Sbjct: 287 SGYSSTIKSSV 297


>gb|ACH54087.1| class III chitinase [Vitis vinifera]
          Length = 297

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/71 (76%), Positives = 65/71 (91%)
 Frame = -1

Query: 385 NRWTSTIPATKIFMGLPAATGAAGSGFIPANVLTSQVLPAIRTSAKYGGVMLWNKYFDDQ 206
           NRWTS+I + +IFMGLPA++ AAGSGFIPANVLTSQ+LP I+ S KYGGVMLW+KY+DDQ
Sbjct: 228 NRWTSSINS-RIFMGLPASSAAAGSGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQ 286

Query: 205 SGYSSNIRSSV 173
           SGYSS+I+SSV
Sbjct: 287 SGYSSSIKSSV 297


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