BLASTX nr result

ID: Coptis24_contig00000360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000360
         (1502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139223.1| PREDICTED: uncharacterized protein LOC101220...   437   e-120
ref|XP_003632331.1| PREDICTED: uncharacterized protein LOC100853...   437   e-120
ref|XP_002520723.1| conserved hypothetical protein [Ricinus comm...   434   e-119
ref|XP_002328508.1| predicted protein [Populus trichocarpa] gi|2...   433   e-119
ref|XP_002512236.1| conserved hypothetical protein [Ricinus comm...   428   e-117

>ref|XP_004139223.1| PREDICTED: uncharacterized protein LOC101220430 [Cucumis sativus]
            gi|449482952|ref|XP_004156452.1| PREDICTED:
            uncharacterized LOC101220430 [Cucumis sativus]
          Length = 299

 Score =  437 bits (1124), Expect = e-120
 Identities = 202/299 (67%), Positives = 248/299 (82%), Gaps = 1/299 (0%)
 Frame = +2

Query: 605  MRDFPTCFGENAVQIADSSSSSN-KAAQNLVTCVYQTKLRGNSCLVNVTWNKSMMGQGLS 781
            MRDFP+CFGEN VQ+AD SSS+N K AQNLVTCVYQ +LRG SCL++VTW+K++MGQGLS
Sbjct: 1    MRDFPSCFGENGVQVADFSSSNNGKTAQNLVTCVYQCRLRGRSCLISVTWSKNLMGQGLS 60

Query: 782  VGIDNSANQCLCKVDIKPWLFSKRKGSKSLEVDASKVHIYWDLSSAKFGSGPEPLEGFYL 961
            VGID+S+NQCLCKVDIKPWLFSKR+GSKSLE  A K+ IYWDLSSAKFGSGPEPLEG+Y+
Sbjct: 61   VGIDDSSNQCLCKVDIKPWLFSKRRGSKSLEAYACKIDIYWDLSSAKFGSGPEPLEGYYV 120

Query: 962  AIVFDKEIGLLLGDLTKEAYKKSNVAPIPSDANYIAKREHIFGKRFYCTKAQFSENGKFH 1141
             IV DK++ LLLGDL +EA+KKSN +P+PS A +I+K+EHIFGK+ +C+KAQF +NG+ H
Sbjct: 121  GIVVDKQMVLLLGDLRREAFKKSNSSPVPSSAVFISKKEHIFGKKVFCSKAQFCDNGQIH 180

Query: 1142 DIAIECDTGGLVDPCLMIRIDTKMMMQVKRLKWKFRGNQSIVIDGNSVEVFWDVHSWLFG 1321
            DI IECDT G+ +PCL++R+D+K ++QVKRL+WKFRGN +I+++G +VEVFWDVHSWLF 
Sbjct: 181  DIIIECDTNGVTEPCLILRVDSKTVLQVKRLQWKFRGNHTILVEGLAVEVFWDVHSWLFS 240

Query: 1322 TSLGNAVFMFHTCFTPEKLWXXXXXXXXXXXXXXXXXTFRDSQLQGLGFSLILYAWKNE 1498
            TS GNAVFMF TC + EKLW                  F DS+ QGLGFSL+LYAWKNE
Sbjct: 241  TSPGNAVFMFKTCLSAEKLWGSQPVCDPNVLSWSFSQRFSDSKSQGLGFSLMLYAWKNE 299


>ref|XP_003632331.1| PREDICTED: uncharacterized protein LOC100853449 [Vitis vinifera]
          Length = 300

 Score =  437 bits (1123), Expect = e-120
 Identities = 206/300 (68%), Positives = 245/300 (81%), Gaps = 2/300 (0%)
 Frame = +2

Query: 605  MRDFPTCFGENAVQIADSSSSSN-KAAQNLVTCVYQTKLRGNSCLVNVTWNKSMMGQGLS 781
            MRDFP+CFGEN VQ+ADSSSSS  + AQNLVTCVYQ +LRG  CL+ +TW K++MGQGLS
Sbjct: 1    MRDFPSCFGENGVQVADSSSSSTARTAQNLVTCVYQCRLRGKWCLITITWTKNLMGQGLS 60

Query: 782  VGIDNSANQCLCKVDIKPWLFSKRKGSKSLEVDASKVHIYWDLSSAKFGSGPEPLEGFYL 961
            VGID+S+NQCLCKVDIKPWLFSKRKG K+LEVD+SK+ +YWDLS+AKFGSGPEPLEGFYL
Sbjct: 61   VGIDDSSNQCLCKVDIKPWLFSKRKGCKNLEVDSSKIDMYWDLSAAKFGSGPEPLEGFYL 120

Query: 962  AIVFDKEIGLLLGDLTKEAYKKSNVAPIPSDANYIAKREHIFGKRFYCTKAQFSENGKFH 1141
            A+VF++E+ LLLGDL KEA KK N  P+PS A  IAKREH+FGKR Y  KAQF + G+ H
Sbjct: 121  AVVFNQELALLLGDLKKEACKKINSPPVPSTAVLIAKREHLFGKRLYFAKAQFCDKGQMH 180

Query: 1142 DIAIECDTGGLVDPCLMIRIDTKMMMQVKRLKWKFRGNQSIVIDGNSVEVFWDVHSWLFG 1321
            DI IECDT G+ +PCL+IRID+KM+MQVKRL+WKFRGN +I++DG  +EVFWDVH+WLFG
Sbjct: 181  DIMIECDTVGVTEPCLLIRIDSKMVMQVKRLQWKFRGNHTILVDGLPIEVFWDVHNWLFG 240

Query: 1322 TSLGNAVFMFHTCFTPEKLW-XXXXXXXXXXXXXXXXXTFRDSQLQGLGFSLILYAWKNE 1498
             ++GNAVFMF +C + EKLW                   FRD+QLQGLGFSLILYAWKNE
Sbjct: 241  NAIGNAVFMFQSCLSAEKLWACQSISSDPSVLAWSWSEKFRDTQLQGLGFSLILYAWKNE 300


>ref|XP_002520723.1| conserved hypothetical protein [Ricinus communis]
            gi|223540108|gb|EEF41685.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 299

 Score =  434 bits (1117), Expect = e-119
 Identities = 206/299 (68%), Positives = 244/299 (81%), Gaps = 1/299 (0%)
 Frame = +2

Query: 605  MRDFPTCFGENAVQIADSSSSS-NKAAQNLVTCVYQTKLRGNSCLVNVTWNKSMMGQGLS 781
            MRDFP+CFGE+ VQ+ADSSSSS +KAAQN+VTCVYQ KLRG  CL+ VTW K++MGQG+S
Sbjct: 1    MRDFPSCFGESGVQVADSSSSSTSKAAQNVVTCVYQCKLRGRFCLITVTWTKNLMGQGVS 60

Query: 782  VGIDNSANQCLCKVDIKPWLFSKRKGSKSLEVDASKVHIYWDLSSAKFGSGPEPLEGFYL 961
            V ID+S NQCLCKVDIKPWLFSKRKG K+LEVD++K+ I+WDLS+AKFGSGPEP EGFYL
Sbjct: 61   VAIDDSTNQCLCKVDIKPWLFSKRKGCKNLEVDSTKIDIHWDLSNAKFGSGPEPFEGFYL 120

Query: 962  AIVFDKEIGLLLGDLTKEAYKKSNVAPIPSDANYIAKREHIFGKRFYCTKAQFSENGKFH 1141
            A+ F++E+ LLLGDL KEAYKK   AP+ S+A +IAK+EHIFGK+FY  K QF + G+ H
Sbjct: 121  AVAFNQEMVLLLGDLKKEAYKKIEDAPLHSNAIFIAKKEHIFGKKFYGAKVQFCDKGQMH 180

Query: 1142 DIAIECDTGGLVDPCLMIRIDTKMMMQVKRLKWKFRGNQSIVIDGNSVEVFWDVHSWLFG 1321
            DIAIECDT  L DPCL+IRID+KM+MQVKRLKWKFRGN +I++DG  VEVFWDVH+WLFG
Sbjct: 181  DIAIECDTVDLKDPCLVIRIDSKMVMQVKRLKWKFRGNHTILVDGLPVEVFWDVHNWLFG 240

Query: 1322 TSLGNAVFMFHTCFTPEKLWXXXXXXXXXXXXXXXXXTFRDSQLQGLGFSLILYAWKNE 1498
            + +GNAVFMF +C + EKLW                  FRD QLQGLGFSLILYAWKNE
Sbjct: 241  SGMGNAVFMFQSCLSAEKLWSSQSVFDPSVLTWSYSQRFRDYQLQGLGFSLILYAWKNE 299


>ref|XP_002328508.1| predicted protein [Populus trichocarpa] gi|222838223|gb|EEE76588.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  433 bits (1114), Expect = e-119
 Identities = 198/299 (66%), Positives = 246/299 (82%), Gaps = 1/299 (0%)
 Frame = +2

Query: 605  MRDFPTCFGENAVQIADSSSSS-NKAAQNLVTCVYQTKLRGNSCLVNVTWNKSMMGQGLS 781
            MRDFP+CFGEN VQIADSSSS+ +K AQNLVTCVYQ ++RG SCL+ +TW+K++MGQGLS
Sbjct: 1    MRDFPSCFGENGVQIADSSSSNTSKNAQNLVTCVYQCRIRGRSCLITITWSKNLMGQGLS 60

Query: 782  VGIDNSANQCLCKVDIKPWLFSKRKGSKSLEVDASKVHIYWDLSSAKFGSGPEPLEGFYL 961
            VGID+SANQCLCKVDIKPWLFSKRKGSKSLE  + K+ IYWDLSSAKFGSGPEP EGFY+
Sbjct: 61   VGIDDSANQCLCKVDIKPWLFSKRKGSKSLEAYSCKIDIYWDLSSAKFGSGPEPFEGFYV 120

Query: 962  AIVFDKEIGLLLGDLTKEAYKKSNVAPIPSDANYIAKREHIFGKRFYCTKAQFSENGKFH 1141
            A+V D+++ L+LGD+ KEA+KK+   PIPS+A ++AKREH+FGK+ +CTKA+F +NG+ H
Sbjct: 121  AVVVDRQMVLILGDMRKEAFKKTGATPIPSNAVFVAKREHVFGKKVFCTKARFCDNGQIH 180

Query: 1142 DIAIECDTGGLVDPCLMIRIDTKMMMQVKRLKWKFRGNQSIVIDGNSVEVFWDVHSWLFG 1321
            D+ IECDT G+ DPCL++R+D K +MQVKRL+WKFRGN +I++DG ++EVFWDVH+WLFG
Sbjct: 181  DLVIECDTIGVSDPCLLVRVDCKTVMQVKRLRWKFRGNHTILVDGLAIEVFWDVHNWLFG 240

Query: 1322 TSLGNAVFMFHTCFTPEKLWXXXXXXXXXXXXXXXXXTFRDSQLQGLGFSLILYAWKNE 1498
             S+GNAVFMF TC + EKLW                  F DS+ Q LGFSLILYAWK+E
Sbjct: 241  ASVGNAVFMFKTCTSAEKLWSSQPLSDPNVLPWSFSQRFLDSKSQNLGFSLILYAWKHE 299


>ref|XP_002512236.1| conserved hypothetical protein [Ricinus communis]
            gi|223548197|gb|EEF49688.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 299

 Score =  428 bits (1101), Expect = e-117
 Identities = 198/299 (66%), Positives = 245/299 (81%), Gaps = 1/299 (0%)
 Frame = +2

Query: 605  MRDFPTCFGENAVQIADSSSSS-NKAAQNLVTCVYQTKLRGNSCLVNVTWNKSMMGQGLS 781
            MRDFP+CFGEN VQ+ADSSSS+ +K AQNLVTCVYQ ++RG SCL+ +TW+K++MGQGLS
Sbjct: 1    MRDFPSCFGENGVQVADSSSSNTSKNAQNLVTCVYQCRIRGRSCLITITWSKNLMGQGLS 60

Query: 782  VGIDNSANQCLCKVDIKPWLFSKRKGSKSLEVDASKVHIYWDLSSAKFGSGPEPLEGFYL 961
            VG+D+SANQCLCKVDIKPWLFSKRKGSKSLE  + K+ IYWDLSSAKFGSGPEPLE FY+
Sbjct: 61   VGMDDSANQCLCKVDIKPWLFSKRKGSKSLEAYSCKIDIYWDLSSAKFGSGPEPLEAFYV 120

Query: 962  AIVFDKEIGLLLGDLTKEAYKKSNVAPIPSDANYIAKREHIFGKRFYCTKAQFSENGKFH 1141
             +V D+++ LLLGD+ KEA+KK++ API S A +++KREH+FGKR + TKAQFS+NG+ H
Sbjct: 121  GVVVDRQMVLLLGDMRKEAFKKTSAAPISSTAVFVSKREHVFGKRVFSTKAQFSDNGQVH 180

Query: 1142 DIAIECDTGGLVDPCLMIRIDTKMMMQVKRLKWKFRGNQSIVIDGNSVEVFWDVHSWLFG 1321
            D+ IECDT G+ DPCL++R+D K +MQVKRL+WKFRGN +I++DG +VEV WDVH+WLFG
Sbjct: 181  DLVIECDTIGVSDPCLVVRVDCKTVMQVKRLRWKFRGNHTILVDGLAVEVLWDVHNWLFG 240

Query: 1322 TSLGNAVFMFHTCFTPEKLWXXXXXXXXXXXXXXXXXTFRDSQLQGLGFSLILYAWKNE 1498
            +S+GNAVFMF TC + EKLW                  F DS+ Q LGFSLILYAWKNE
Sbjct: 241  SSVGNAVFMFKTCLSAEKLWSSQPLSDPNVLPWSFSQRFLDSKSQNLGFSLILYAWKNE 299


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