BLASTX nr result
ID: Coptis24_contig00000359
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000359 (775 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533909.1| PREDICTED: uncharacterized protein LOC100819... 93 7e-17 ref|XP_002280648.1| PREDICTED: uncharacterized protein LOC100252... 91 3e-16 ref|XP_002308353.1| predicted protein [Populus trichocarpa] gi|2... 90 5e-16 ref|NP_001236490.1| uncharacterized protein LOC100305518 [Glycin... 88 2e-15 ref|XP_002531175.1| conserved hypothetical protein [Ricinus comm... 88 2e-15 >ref|XP_003533909.1| PREDICTED: uncharacterized protein LOC100819935 [Glycine max] Length = 159 Score = 92.8 bits (229), Expect = 7e-17 Identities = 43/51 (84%), Positives = 45/51 (88%) Frame = +1 Query: 4 LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAIT 156 +GTREVYEEKLR+GNL HHDPTI PGLGSARCPRCLSLLNP SE EW IT Sbjct: 1 MGTREVYEEKLRTGNL-HHDPTINPGLGSARCPRCLSLLNPNSERGEWTIT 50 >ref|XP_002280648.1| PREDICTED: uncharacterized protein LOC100252017 [Vitis vinifera] gi|297739803|emb|CBI29985.3| unnamed protein product [Vitis vinifera] Length = 158 Score = 90.9 bits (224), Expect = 3e-16 Identities = 41/52 (78%), Positives = 46/52 (88%) Frame = +1 Query: 4 LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAITS 159 +GTREVYE+KLRSGNL HHDPTI PGLGS RCPRCLSL+NP S++ EW ITS Sbjct: 1 MGTREVYEQKLRSGNL-HHDPTINPGLGSPRCPRCLSLINPNSKSGEWTITS 51 >ref|XP_002308353.1| predicted protein [Populus trichocarpa] gi|222854329|gb|EEE91876.1| predicted protein [Populus trichocarpa] Length = 158 Score = 90.1 bits (222), Expect = 5e-16 Identities = 42/52 (80%), Positives = 45/52 (86%) Frame = +1 Query: 4 LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAITS 159 +GTREVYE+KLR+GNLYH DPTIKPGLGS RCPRCLSLLNP S EW ITS Sbjct: 1 MGTREVYEQKLRTGNLYH-DPTIKPGLGSPRCPRCLSLLNPISAKGEWTITS 51 Score = 59.3 bits (142), Expect = 9e-07 Identities = 28/49 (57%), Positives = 33/49 (67%) Frame = +2 Query: 293 MLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXFSAASAAFGGMLI 439 MLSAVHGFNTG+PF+Q +KGPKW SAASAAFGG ++ Sbjct: 67 MLSAVHGFNTGIPFLQNRLKGPKWLPFLVGLPPLLAVSAASAAFGGYVL 115 >ref|NP_001236490.1| uncharacterized protein LOC100305518 [Glycine max] gi|255625771|gb|ACU13230.1| unknown [Glycine max] Length = 159 Score = 87.8 bits (216), Expect = 2e-15 Identities = 41/51 (80%), Positives = 43/51 (84%) Frame = +1 Query: 4 LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAIT 156 +GTREVYEEKLR+GNL HHDPTI PG GSARCPRCLSLLNP E EW IT Sbjct: 1 MGTREVYEEKLRTGNL-HHDPTINPGHGSARCPRCLSLLNPNFERGEWTIT 50 >ref|XP_002531175.1| conserved hypothetical protein [Ricinus communis] gi|223529245|gb|EEF31218.1| conserved hypothetical protein [Ricinus communis] Length = 158 Score = 87.8 bits (216), Expect = 2e-15 Identities = 41/52 (78%), Positives = 44/52 (84%) Frame = +1 Query: 4 LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAITS 159 +GTREVYEEKLR+GNL HHDPTI PGLGS RCPRCLSLL P S+ EW ITS Sbjct: 1 MGTREVYEEKLRNGNL-HHDPTINPGLGSPRCPRCLSLLIPNSDKGEWTITS 51 Score = 57.0 bits (136), Expect = 4e-06 Identities = 27/46 (58%), Positives = 30/46 (65%) Frame = +2 Query: 293 MLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXFSAASAAFGG 430 MLSAVHGFNTG+PF+Q +KGPKW S ASAAFGG Sbjct: 67 MLSAVHGFNTGIPFLQNRLKGPKWLSLLVGLPPLLAVSGASAAFGG 112