BLASTX nr result

ID: Coptis24_contig00000359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000359
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533909.1| PREDICTED: uncharacterized protein LOC100819...    93   7e-17
ref|XP_002280648.1| PREDICTED: uncharacterized protein LOC100252...    91   3e-16
ref|XP_002308353.1| predicted protein [Populus trichocarpa] gi|2...    90   5e-16
ref|NP_001236490.1| uncharacterized protein LOC100305518 [Glycin...    88   2e-15
ref|XP_002531175.1| conserved hypothetical protein [Ricinus comm...    88   2e-15

>ref|XP_003533909.1| PREDICTED: uncharacterized protein LOC100819935 [Glycine max]
          Length = 159

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 43/51 (84%), Positives = 45/51 (88%)
 Frame = +1

Query: 4   LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAIT 156
           +GTREVYEEKLR+GNL HHDPTI PGLGSARCPRCLSLLNP SE  EW IT
Sbjct: 1   MGTREVYEEKLRTGNL-HHDPTINPGLGSARCPRCLSLLNPNSERGEWTIT 50


>ref|XP_002280648.1| PREDICTED: uncharacterized protein LOC100252017 [Vitis vinifera]
           gi|297739803|emb|CBI29985.3| unnamed protein product
           [Vitis vinifera]
          Length = 158

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 41/52 (78%), Positives = 46/52 (88%)
 Frame = +1

Query: 4   LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAITS 159
           +GTREVYE+KLRSGNL HHDPTI PGLGS RCPRCLSL+NP S++ EW ITS
Sbjct: 1   MGTREVYEQKLRSGNL-HHDPTINPGLGSPRCPRCLSLINPNSKSGEWTITS 51


>ref|XP_002308353.1| predicted protein [Populus trichocarpa] gi|222854329|gb|EEE91876.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +1

Query: 4   LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAITS 159
           +GTREVYE+KLR+GNLYH DPTIKPGLGS RCPRCLSLLNP S   EW ITS
Sbjct: 1   MGTREVYEQKLRTGNLYH-DPTIKPGLGSPRCPRCLSLLNPISAKGEWTITS 51



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +2

Query: 293 MLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXFSAASAAFGGMLI 439
           MLSAVHGFNTG+PF+Q  +KGPKW             SAASAAFGG ++
Sbjct: 67  MLSAVHGFNTGIPFLQNRLKGPKWLPFLVGLPPLLAVSAASAAFGGYVL 115


>ref|NP_001236490.1| uncharacterized protein LOC100305518 [Glycine max]
           gi|255625771|gb|ACU13230.1| unknown [Glycine max]
          Length = 159

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 41/51 (80%), Positives = 43/51 (84%)
 Frame = +1

Query: 4   LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAIT 156
           +GTREVYEEKLR+GNL HHDPTI PG GSARCPRCLSLLNP  E  EW IT
Sbjct: 1   MGTREVYEEKLRTGNL-HHDPTINPGHGSARCPRCLSLLNPNFERGEWTIT 50


>ref|XP_002531175.1| conserved hypothetical protein [Ricinus communis]
           gi|223529245|gb|EEF31218.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 158

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 41/52 (78%), Positives = 44/52 (84%)
 Frame = +1

Query: 4   LGTREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSETAEWAITS 159
           +GTREVYEEKLR+GNL HHDPTI PGLGS RCPRCLSLL P S+  EW ITS
Sbjct: 1   MGTREVYEEKLRNGNL-HHDPTINPGLGSPRCPRCLSLLIPNSDKGEWTITS 51



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/46 (58%), Positives = 30/46 (65%)
 Frame = +2

Query: 293 MLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXFSAASAAFGG 430
           MLSAVHGFNTG+PF+Q  +KGPKW             S ASAAFGG
Sbjct: 67  MLSAVHGFNTGIPFLQNRLKGPKWLSLLVGLPPLLAVSGASAAFGG 112


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