BLASTX nr result

ID: Coptis24_contig00000355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000355
         (2100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247...   233   1e-58
emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]   230   1e-57
ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-46
ref|XP_004134399.1| PREDICTED: uncharacterized protein LOC101209...   191   7e-46
ref|XP_002528361.1| conserved hypothetical protein [Ricinus comm...   190   1e-45

>ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera]
            gi|296083723|emb|CBI23712.3| unnamed protein product
            [Vitis vinifera]
          Length = 642

 Score =  233 bits (595), Expect = 1e-58
 Identities = 146/387 (37%), Positives = 202/387 (52%), Gaps = 14/387 (3%)
 Frame = -3

Query: 1120 CPSATRSG--------QWILKTVDENKCGKNVLNDSLLRHLGAL-GSIVMRRVGLIDVKG 968
            CP AT +G        QW++ T+  +K    +L   L R  GAL   +      LID KG
Sbjct: 156  CPVATGTGDVVVSPAGQWVVGTLMGSKSMMKILKSPLFRQFGALEDDVKFGGTSLIDAKG 215

Query: 967  TKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNKHIFAISN-GVXXXXXXXXXX 791
               + F+S P   S+RS Q    G     N R G ++++K + + S+             
Sbjct: 216  AMCTDFISSPGGLSIRSPQNLPKGNISQGNHRYGPEAVHKRLISTSSTNSTCSDQSPSSG 275

Query: 790  XXXXSQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGGK 611
                SQG LQ  W+ G+P+F +SVDDQR VYV+   ++E  ++  LDC+YLF+ +  G K
Sbjct: 276  FATVSQGMLQCTWKGGIPHFVFSVDDQREVYVANQWKAELPDDKALDCMYLFHSRTGGQK 335

Query: 610  EKGTCDKSLDLAGKMNVTSSLTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHILGRT 431
            E    D   DL GKM V+SS TLC   ++SK+MET+ V FG        +  S  I+ + 
Sbjct: 336  EHKIPDNKADLVGKMKVSSSFTLC--PNDSKIMETEFVFFGGRENYASKMQTSSSIIRKN 393

Query: 430  KVSVNKMVDVFRPKHLPKHNSCSQFGTESYVHEHFSWE--ADTSSNVGRLGAEIFQAG-- 263
            K    K+V+VFR  H  K  + S+FG  + + E+ SWE   DT +N   LG         
Sbjct: 394  KGLSKKVVEVFRTSHSSKQRTTSKFGGTTAILENDSWEQCQDTCNNPSALGRTNLLENDL 453

Query: 262  PPNVELAAIVLREQTHDSHQATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXSRLRG 83
            PPN+ELAAIV+++      Q   VGGWGLKFL+K  +   +                LR 
Sbjct: 454  PPNLELAAIVVKDHLPGKRQEAEVGGWGLKFLKKVGLKQNSASLEASLPSECC----LRS 509

Query: 82   MGDCSTSMNVIIPAGAHGGPRTRNGGP 2
             GDCSTSM++++PAG HGGPRTRNGGP
Sbjct: 510  TGDCSTSMDILVPAGIHGGPRTRNGGP 536


>emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]
          Length = 597

 Score =  230 bits (587), Expect = 1e-57
 Identities = 145/387 (37%), Positives = 201/387 (51%), Gaps = 14/387 (3%)
 Frame = -3

Query: 1120 CPSATRSG--------QWILKTVDENKCGKNVLNDSLLRHLGAL-GSIVMRRVGLIDVKG 968
            CP AT +G        QW++ T+  +K    +L   L R  GAL   +      LID KG
Sbjct: 111  CPVATGTGDVVVSPAGQWVVGTLMGSKSMMKILKSPLFRQFGALEDDVKFGGTSLIDAKG 170

Query: 967  TKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNKHIFAISN-GVXXXXXXXXXX 791
               + F+S P   S+RS Q    G     N   G ++++K + + S+             
Sbjct: 171  AMCTDFISSPGGLSIRSPQNLPKGNISQGNHIYGPEAVHKRLISTSSTNSTCSDQSPSSG 230

Query: 790  XXXXSQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGGK 611
                SQG LQ  W+ G+P+F +SVDDQR VYV+   ++E  ++  LDC+YLF+ +  G K
Sbjct: 231  FATVSQGMLQCTWKGGIPHFVFSVDDQREVYVANQWKAELPDDKALDCMYLFHSRTGGQK 290

Query: 610  EKGTCDKSLDLAGKMNVTSSLTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHILGRT 431
            E    D   DL GKM V+SS TLC   ++SK+MET+ V FG        +  S  I+ + 
Sbjct: 291  EHKIPDNKADLVGKMKVSSSFTLC--PNDSKIMETEFVFFGGRENYASKMQTSSSIIRKN 348

Query: 430  KVSVNKMVDVFRPKHLPKHNSCSQFGTESYVHEHFSWE--ADTSSNVGRLGAEIFQAG-- 263
            K    K+V+VFR  H  K  + S+FG  + + E+ SWE   DT +N   LG         
Sbjct: 349  KGLSKKVVEVFRTSHSSKQRTTSKFGGTTAILENDSWEQCQDTCNNPSALGRTNLLENDL 408

Query: 262  PPNVELAAIVLREQTHDSHQATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXSRLRG 83
            PPN+ELAAIV+++      Q   VGGWGLKFL+K  +   +                LR 
Sbjct: 409  PPNLELAAIVVKDHLPGKRQEAEVGGWGLKFLKKVGLKQNSASLEASLPSECC----LRS 464

Query: 82   MGDCSTSMNVIIPAGAHGGPRTRNGGP 2
             GDCSTSM++++PAG HGGPRTRNGGP
Sbjct: 465  TGDCSTSMDILVPAGIHGGPRTRNGGP 491


>ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1|
            predicted protein [Populus trichocarpa]
          Length = 615

 Score =  193 bits (491), Expect = 1e-46
 Identities = 131/371 (35%), Positives = 192/371 (51%), Gaps = 6/371 (1%)
 Frame = -3

Query: 1096 QWILKTVDENKCGKNVLNDSLLRHLGAL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPSLR 920
            QWI  ++  +K   N+L   LLR  GA  G     +V   DVKG+    FM+ P   S  
Sbjct: 143  QWIAGSIMGSKSMVNILKSPLLRRYGAYDGDANFEKVTSSDVKGSICYDFMNSPGGLSSY 202

Query: 919  SLQKPETGTAYVENPRSGSKSLNKHIFAISN-GVXXXXXXXXXXXXXXSQGTLQREWENG 743
            S  K + G     + +  S+SL+K   ++S+                 +QGTLQ  W+ G
Sbjct: 203  SPHKLDNGAQTPGSHKYESESLHKRFVSMSSTNSTCSDQSSSSLPAAVTQGTLQCTWKGG 262

Query: 742  VPYFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGGKEKGTCDKSLDLAGKMN 563
             P+F +S+DDQ+VVYV+       +++  L+ VYLF+ +K G KE    DK   L G+MN
Sbjct: 263  NPHFIFSLDDQKVVYVANFYNVNSADDKALEYVYLFHSRKGGQKEHMIHDKESRLVGQMN 322

Query: 562  VTSSLTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHILGRTKVSVNKMVDVFRPKHL 383
            V++S +LC   +N ++ME + VLFG     +G +  S H L + K   +++V+VFR  + 
Sbjct: 323  VSTSFSLC--PNNCRIMEREFVLFGCYENLVGELQSSSHDLRKNKRLSSRVVEVFRTNNS 380

Query: 382  PKHNSCSQFGTESYVHEHFSWE--ADTSSNVGRLGAEIFQAG--PPNVELAAIVLREQTH 215
             K  + S+F     + E+ SWE   +   N+  LG         PPN+ELAAI+++    
Sbjct: 381  FKKRTNSRFDGSGAILENSSWEPFQEREYNMDALGGANLLENHLPPNLELAAILVKNHLP 440

Query: 214  DSHQATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXSRLRGMGDCSTSMNVIIPAGA 35
            +  +    GGWGL FL+   V    T             S  R  GDCSTS++++IPAG 
Sbjct: 441  EK-RPEKTGGWGLNFLKNTAV----TQAKDTMKSSVLSASCARDTGDCSTSIDILIPAGL 495

Query: 34   HGGPRTRNGGP 2
            HGGPRTRNGGP
Sbjct: 496  HGGPRTRNGGP 506


>ref|XP_004134399.1| PREDICTED: uncharacterized protein LOC101209831 [Cucumis sativus]
            gi|449486758|ref|XP_004157393.1| PREDICTED:
            uncharacterized LOC101209831 [Cucumis sativus]
          Length = 634

 Score =  191 bits (485), Expect = 7e-46
 Identities = 128/384 (33%), Positives = 191/384 (49%), Gaps = 11/384 (2%)
 Frame = -3

Query: 1120 CPSA--------TRSGQWILKTVDENKCGKNVLNDSLLRHLGALGSIV-MRRVGLIDVKG 968
            CPSA        + +  W + ++  +K   N+L   LL  LG       + R+ L D+KG
Sbjct: 151  CPSAGEDSNTVLSSNKMWFVGSIMGSKSMINILKSPLLHQLGITEETSNLIRMDLNDIKG 210

Query: 967  TKDSGFMSFPSRPSLRSLQKPETGTAYVENPRSGSKSLNKHIFAIS--NGVXXXXXXXXX 794
               S FM  P    + SL+  +      E+ + GS + N+  F+    N +         
Sbjct: 211  FTGSNFMDSPGDVDISSLKNLDNTKP--ESHQDGSDAANERFFSTPSRNSLCSDQSSSGS 268

Query: 793  XXXXXSQGTLQREWENGVPYFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGG 614
                  QG LQ  W++G PYF +SVDD++ VYV+ + +   ++N  LD VYLF   K G 
Sbjct: 269  ASTSLCQGMLQFTWKDGSPYFIFSVDDEKEVYVASSSKVTSADNNALDYVYLFCSAKSGL 328

Query: 613  KEKGTCDKSLDLAGKMNVTSSLTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHILGR 434
            K+    +    + GKM V++S  +C  S+NSK+ +T+ VLFG        I+ S+ +L +
Sbjct: 329  KDHEVRNSRPCIVGKMTVSTSYGVC--SNNSKIADTEFVLFGGIENSDLEISPSNTVLKK 386

Query: 433  TKVSVNKMVDVFRPKHLPKHNSCSQFGTESYVHEHFSWEADTSSNVGRLGAEIFQAGPPN 254
             KV   K+ +VFR  +  KH +       S + +   WE  +            +  PPN
Sbjct: 387  NKVFPRKVAEVFRTSNSSKHRNIPNLNRSSVMKDFCPWEPYSDKLNSSDDLICARDLPPN 446

Query: 253  VELAAIVLREQTHDSHQATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXSRLRGMGD 74
            +ELAAIV+R+   + H  + VGGWGLKFL++A+    N                +R  G 
Sbjct: 447  LELAAIVVRDHLPEDH-GSRVGGWGLKFLKQAKAKQTNNSLDTSVQADCC----VRNSGK 501

Query: 73   CSTSMNVIIPAGAHGGPRTRNGGP 2
            CSTSM+++IPAG HGGPRTRNGGP
Sbjct: 502  CSTSMDILIPAGLHGGPRTRNGGP 525


>ref|XP_002528361.1| conserved hypothetical protein [Ricinus communis]
            gi|223532229|gb|EEF34033.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 637

 Score =  190 bits (482), Expect = 1e-45
 Identities = 128/373 (34%), Positives = 191/373 (51%), Gaps = 6/373 (1%)
 Frame = -3

Query: 1102 SGQWILKTVDENKCGKNVLNDSLLRHLGAL-GSIVMRRVGLIDVKGTKDSGFMSFPSRPS 926
            +G WI+ ++  +K   N+LN  L R  GA  G     +V   DV G+    FM+ PS   
Sbjct: 165  AGHWIVGSIMGSKSMVNILNSPLFRKYGAYDGDANFEKVSFSDVDGSICYNFMNSPSVLG 224

Query: 925  LRSLQKPETGTAYVENPRSGSKSLNKHIFAISN-GVXXXXXXXXXXXXXXSQGTLQREWE 749
              S  K    T      R  S++LN+   ++S+                 SQG LQ  WE
Sbjct: 225  SYSSNKLYKETPIPGKQRYRSETLNERPVSMSSTNSTCSDQSSSSLSGTVSQGMLQCTWE 284

Query: 748  NGVPYFKYSVDDQRVVYVSKTVESEFSENMPLDCVYLFYKKKVGGKEKGTCDKSLDLAGK 569
            +G P+F +S+DDQ+VVYV+    S+ ++++ +D  YLF+ +K   KE    D    L GK
Sbjct: 285  DGNPHFVFSLDDQKVVYVANLWNSQLADDIVVDYTYLFHLRKGDQKESEIHDTESHLVGK 344

Query: 568  MNVTSSLTLCSDSDNSKVMETQCVLFGADAKEIGNIACSDHILGRTKVSVNKMVDVFRPK 389
            M V++S +LC   +NSK+ME + +LFG++ + +  +  S H L + K    K+ +VFR  
Sbjct: 345  MKVSTSFSLC--QNNSKIMEREFILFGSN-ENVKRMQTSSHDLRKNKGLSKKVAEVFRTS 401

Query: 388  HLPKHNSCSQFGTESYVHEHFSWE--ADTSSNV-GRLGAEIFQAG-PPNVELAAIVLREQ 221
            H  K  + S+    S + E  SWE   DT +N+    G  + +   PPN+E+AAIV++E 
Sbjct: 402  HSMKKRTISRLTGSSAILESCSWEPLQDTENNIDAHSGVNLLEKHLPPNLEMAAIVVKEH 461

Query: 220  THDSHQATVVGGWGLKFLQKARVGGANTXXXXXXXXXXXXXSRLRGMGDCSTSMNVIIPA 41
              +  +    GGWGL FL+K+                       R  GDCSTS++++IP 
Sbjct: 462  IPEKRREK-GGGWGLNFLKKSSAKQTTDLMESSQHYGSC----ARNTGDCSTSIDILIPV 516

Query: 40   GAHGGPRTRNGGP 2
              HGGPRTRNGGP
Sbjct: 517  SLHGGPRTRNGGP 529


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