BLASTX nr result

ID: Coptis24_contig00000348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000348
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173...   113   2e-72
gb|ABK22320.1| unknown [Picea sitchensis]                             113   8e-72
gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]             112   2e-70
ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...   114   4e-70
dbj|BAH01365.1| unnamed protein product [Oryza sativa Japonica G...   111   1e-69

>gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown
           [Picea sitchensis]
          Length = 216

 Score =  113 bits (283), Expect(3) = 2e-72
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +3

Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722
           VLCMGVAVGNCGM+EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKP RIF
Sbjct: 161 VLCMGVAVGNCGMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPNRIF 216



 Score =  112 bits (281), Expect(3) = 2e-72
 Identities = 56/77 (72%), Positives = 60/77 (77%)
 Frame = +2

Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388
           MKVCMLGDAQHVEEAEK+GLDYMDVEG                 +HAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKLGLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 389 LLGPGLNKAGKFPTLVT 439
           LLGPGLNKAGKFPTLV+
Sbjct: 122 LLGPGLNKAGKFPTLVS 138



 Score = 95.1 bits (235), Expect(3) = 2e-72
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +3

Query: 3   EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146
           + KEK RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM
Sbjct: 19  DSKEKQRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score =  113 bits (282), Expect(3) = 8e-72
 Identities = 52/56 (92%), Positives = 55/56 (98%)
 Frame = +3

Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722
           VLCMGVAVGNCGM+EKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F
Sbjct: 161 VLCMGVAVGNCGMEEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPARVF 216



 Score =  110 bits (276), Expect(3) = 8e-72
 Identities = 55/77 (71%), Positives = 59/77 (76%)
 Frame = +2

Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388
           MKVCMLGDAQH+EEAEKI LDYMDVEG                 +HAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 389 LLGPGLNKAGKFPTLVT 439
           LLGPGLNKAGKFPTLV+
Sbjct: 122 LLGPGLNKAGKFPTLVS 138



 Score = 95.1 bits (235), Expect(3) = 8e-72
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +3

Query: 3   EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146
           E K+K RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM
Sbjct: 19  ESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66


>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score =  112 bits (281), Expect(3) = 2e-70
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +2

Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388
           MKVCMLGDAQHVEEAEKIGLDYMDVE                  +HAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 389 LLGPGLNKAGKFPTLVT 439
           LLGPGLNKAGKFPTLVT
Sbjct: 122 LLGPGLNKAGKFPTLVT 138



 Score =  110 bits (274), Expect(3) = 2e-70
 Identities = 50/56 (89%), Positives = 54/56 (96%)
 Frame = +3

Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722
           VLCMGVAVGNC M+EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F
Sbjct: 161 VLCMGVAVGNCAMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPYRVF 216



 Score = 92.0 bits (227), Expect(3) = 2e-70
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 3   EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146
           + +EK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM
Sbjct: 19  DSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66


>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  114 bits (284), Expect(3) = 4e-70
 Identities = 58/77 (75%), Positives = 60/77 (77%)
 Frame = +2

Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388
           MKVCMLGDAQHVEEAEKIGL+YMDVEG                 +HAFLASEAVIKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 389 LLGPGLNKAGKFPTLVT 439
           LLGPGLNKAGKFPTLVT
Sbjct: 122 LLGPGLNKAGKFPTLVT 138



 Score =  105 bits (261), Expect(3) = 4e-70
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = +3

Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722
           VLCMGVAVGNC M+EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMG+  R+F
Sbjct: 161 VLCMGVAVGNCSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGRSNRVF 216



 Score = 94.4 bits (233), Expect(3) = 4e-70
 Identities = 44/48 (91%), Positives = 44/48 (91%)
 Frame = +3

Query: 3   EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146
           E KEK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM
Sbjct: 19  ESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66


>dbj|BAH01365.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 216

 Score =  111 bits (278), Expect(3) = 1e-69
 Identities = 56/77 (72%), Positives = 59/77 (76%)
 Frame = +2

Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388
           MKVCMLGDAQHVEEAEK+GLDYMDVE                  +HAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 389 LLGPGLNKAGKFPTLVT 439
           LLGPGLNKAGKFPTLVT
Sbjct: 122 LLGPGLNKAGKFPTLVT 138



 Score =  107 bits (267), Expect(3) = 1e-69
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = +3

Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722
           VLCMGVAVGNC M+EKQ+FQNVQ+SVNFLVSLLKKNWQNVRCLYLK+TMGK +R+F
Sbjct: 161 VLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVIRVF 216



 Score = 93.2 bits (230), Expect(3) = 1e-69
 Identities = 43/48 (89%), Positives = 44/48 (91%)
 Frame = +3

Query: 3   EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146
           E +EK RKF ET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM
Sbjct: 19  ESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66


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