BLASTX nr result
ID: Coptis24_contig00000348
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000348 (951 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173... 113 2e-72 gb|ABK22320.1| unknown [Picea sitchensis] 113 8e-72 gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis] 112 2e-70 ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like... 114 4e-70 dbj|BAH01365.1| unnamed protein product [Oryza sativa Japonica G... 111 1e-69 >gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown [Picea sitchensis] Length = 216 Score = 113 bits (283), Expect(3) = 2e-72 Identities = 53/56 (94%), Positives = 55/56 (98%) Frame = +3 Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722 VLCMGVAVGNCGM+EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKP RIF Sbjct: 161 VLCMGVAVGNCGMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPNRIF 216 Score = 112 bits (281), Expect(3) = 2e-72 Identities = 56/77 (72%), Positives = 60/77 (77%) Frame = +2 Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388 MKVCMLGDAQHVEEAEK+GLDYMDVEG +HAFLASEA+IKQIPR Sbjct: 62 MKVCMLGDAQHVEEAEKLGLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121 Query: 389 LLGPGLNKAGKFPTLVT 439 LLGPGLNKAGKFPTLV+ Sbjct: 122 LLGPGLNKAGKFPTLVS 138 Score = 95.1 bits (235), Expect(3) = 2e-72 Identities = 44/48 (91%), Positives = 45/48 (93%) Frame = +3 Query: 3 EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146 + KEK RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM Sbjct: 19 DSKEKQRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66 >gb|ABK22320.1| unknown [Picea sitchensis] Length = 216 Score = 113 bits (282), Expect(3) = 8e-72 Identities = 52/56 (92%), Positives = 55/56 (98%) Frame = +3 Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722 VLCMGVAVGNCGM+EKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F Sbjct: 161 VLCMGVAVGNCGMEEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPARVF 216 Score = 110 bits (276), Expect(3) = 8e-72 Identities = 55/77 (71%), Positives = 59/77 (76%) Frame = +2 Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388 MKVCMLGDAQH+EEAEKI LDYMDVEG +HAFLASEA+IKQIPR Sbjct: 62 MKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121 Query: 389 LLGPGLNKAGKFPTLVT 439 LLGPGLNKAGKFPTLV+ Sbjct: 122 LLGPGLNKAGKFPTLVS 138 Score = 95.1 bits (235), Expect(3) = 8e-72 Identities = 44/48 (91%), Positives = 45/48 (93%) Frame = +3 Query: 3 EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146 E K+K RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM Sbjct: 19 ESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66 >gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis] Length = 216 Score = 112 bits (281), Expect(3) = 2e-70 Identities = 57/77 (74%), Positives = 59/77 (76%) Frame = +2 Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388 MKVCMLGDAQHVEEAEKIGLDYMDVE +HAFLASEA+IKQIPR Sbjct: 62 MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121 Query: 389 LLGPGLNKAGKFPTLVT 439 LLGPGLNKAGKFPTLVT Sbjct: 122 LLGPGLNKAGKFPTLVT 138 Score = 110 bits (274), Expect(3) = 2e-70 Identities = 50/56 (89%), Positives = 54/56 (96%) Frame = +3 Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722 VLCMGVAVGNC M+EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F Sbjct: 161 VLCMGVAVGNCAMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPYRVF 216 Score = 92.0 bits (227), Expect(3) = 2e-70 Identities = 42/48 (87%), Positives = 44/48 (91%) Frame = +3 Query: 3 EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146 + +EK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM Sbjct: 19 DSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66 >ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera] Length = 216 Score = 114 bits (284), Expect(3) = 4e-70 Identities = 58/77 (75%), Positives = 60/77 (77%) Frame = +2 Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388 MKVCMLGDAQHVEEAEKIGL+YMDVEG +HAFLASEAVIKQIPR Sbjct: 62 MKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121 Query: 389 LLGPGLNKAGKFPTLVT 439 LLGPGLNKAGKFPTLVT Sbjct: 122 LLGPGLNKAGKFPTLVT 138 Score = 105 bits (261), Expect(3) = 4e-70 Identities = 48/56 (85%), Positives = 53/56 (94%) Frame = +3 Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722 VLCMGVAVGNC M+EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMG+ R+F Sbjct: 161 VLCMGVAVGNCSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGRSNRVF 216 Score = 94.4 bits (233), Expect(3) = 4e-70 Identities = 44/48 (91%), Positives = 44/48 (91%) Frame = +3 Query: 3 EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146 E KEK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM Sbjct: 19 ESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66 >dbj|BAH01365.1| unnamed protein product [Oryza sativa Japonica Group] Length = 216 Score = 111 bits (278), Expect(3) = 1e-69 Identities = 56/77 (72%), Positives = 59/77 (76%) Frame = +2 Query: 209 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIPR 388 MKVCMLGDAQHVEEAEK+GLDYMDVE +HAFLASEA+IKQIPR Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121 Query: 389 LLGPGLNKAGKFPTLVT 439 LLGPGLNKAGKFPTLVT Sbjct: 122 LLGPGLNKAGKFPTLVT 138 Score = 107 bits (267), Expect(3) = 1e-69 Identities = 48/56 (85%), Positives = 54/56 (96%) Frame = +3 Query: 555 VLCMGVAVGNCGMDEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 722 VLCMGVAVGNC M+EKQ+FQNVQ+SVNFLVSLLKKNWQNVRCLYLK+TMGK +R+F Sbjct: 161 VLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVIRVF 216 Score = 93.2 bits (230), Expect(3) = 1e-69 Identities = 43/48 (89%), Positives = 44/48 (91%) Frame = +3 Query: 3 EQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 146 E +EK RKF ET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM Sbjct: 19 ESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66