BLASTX nr result

ID: Coptis24_contig00000344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000344
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265739.1| PREDICTED: pathogenesis-related genes transc...   177   4e-42
ref|NP_001233991.1| pathogenesis-related genes transcriptional a...   161   4e-37
gb|AAC14323.1| TSI1 [Nicotiana tabacum]                               150   9e-34
ref|XP_002319978.1| AP2/ERF domain-containing transcription fact...   145   2e-32
ref|XP_003519293.1| PREDICTED: pathogenesis-related genes transc...   131   3e-28

>ref|XP_002265739.1| PREDICTED: pathogenesis-related genes transcriptional activator
           PTI6 [Vitis vinifera]
          Length = 285

 Score =  177 bits (450), Expect = 4e-42
 Identities = 120/275 (43%), Positives = 152/275 (55%), Gaps = 16/275 (5%)
 Frame = -1

Query: 932 MTISPPVKFSEHVLTTTKLVHHQKS----------SKIRHKVVRIIVTDVDATXXXXXXX 783
           M I P VKFSEHV+TT+K +   +S           ++RH+VVRII TD DAT       
Sbjct: 15  MPIRPAVKFSEHVVTTSKHMQELESVSASECLSGRRRVRHRVVRIIHTDGDATDSSSDDE 74

Query: 782 XEGKFVRRVKRHVREIDIKLQQQEVKLVLGTEKSKKKRKMIKLXXXXXXXXXXXXXXXXX 603
              + V+RVKRHV EI ++        V   +K   K+++++L                 
Sbjct: 75  V--ELVQRVKRHVTEISLQPS------VESPQKEPTKKRVLRLPESESTR---------- 116

Query: 602 XXXXQRKKYRGVRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNA 423
                RKK+RGVRQRPWGRWAAEIRDPT RKRLWLGT++T EEAA+ YD AA+ LKG NA
Sbjct: 117 -----RKKFRGVRQRPWGRWAAEIRDPTRRKRLWLGTYDTPEEAARVYDKAAVSLKGPNA 171

Query: 422 ITNFPTTPPDHF-----YSKSASASEEDVSVKSPTSVLN-GDFFPFSPFTYXXXXXXXXX 261
           +TNFP+            S+S + S   V+  SPTSVL   +  PF+ F Y         
Sbjct: 172 VTNFPSVVKTESVATAGQSQSETCSLPSVTASSPTSVLRYNEEAPFNGFGY-CDVDAFGF 230

Query: 260 XXDLPLTLPDIELPKRYAAVGEEEFGEFDVDYFSV 156
             D+PLTLPDI   K    + E+EFGEFD D F V
Sbjct: 231 DFDVPLTLPDIFSNKH---LEEDEFGEFDPDDFLV 262


>ref|NP_001233991.1| pathogenesis-related genes transcriptional activator PTI6 [Solanum
           lycopersicum] gi|7531181|sp|O04682.1|PTI6_SOLLC RecName:
           Full=Pathogenesis-related genes transcriptional
           activator PTI6; AltName: Full=PTO-interacting protein 6
           gi|2213785|gb|AAC49741.1| Pti6 [Solanum lycopersicum]
          Length = 248

 Score =  161 bits (407), Expect = 4e-37
 Identities = 107/271 (39%), Positives = 143/271 (52%), Gaps = 15/271 (5%)
 Frame = -1

Query: 920 PPVKFSEHVLTTTKLV---HHQKSSKIRHKVVRIIVTDVDATXXXXXXXXEGKFVRRVKR 750
           P +KF++H++TT K V   H++KS+    +VVRII+TD DAT            VRRVKR
Sbjct: 7   PVIKFTQHIVTTNKHVFSEHNEKSNSELQRVVRIILTDADATDSSDDEGR--NTVRRVKR 64

Query: 749 HVREIDIKLQQQEVKLVLGTEKSKKKRKMIKLXXXXXXXXXXXXXXXXXXXXXQRKKYRG 570
           HV EI++    + +          +KR+ +                       +RKK+RG
Sbjct: 65  HVTEINLMPSTKSI--------GDRKRRSVS----------------PDSDVTRRKKFRG 100

Query: 569 VRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFP------ 408
           VRQRPWGRWAAEIRDPT  KR+WLGT++T EEAA  YD AA+ LKG +A+TNFP      
Sbjct: 101 VRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAE 160

Query: 407 -----TTPPDHFYSKSASASEEDVSVKSPTSVL-NGDFFPFSPFTYXXXXXXXXXXXDLP 246
                T       +     SE DV++ SPTSVL + DF PF    +            L 
Sbjct: 161 VTVTVTETETESVADGGDKSENDVAL-SPTSVLCDNDFAPFDNLGFCEVDAFGFDVDSL- 218

Query: 245 LTLPDIELPKRYAAVGEEEFGEFDVDYFSVE 153
             LPD  + ++Y     +EFGEFD D F++E
Sbjct: 219 FRLPDFAMTEKYYG---DEFGEFDFDDFALE 246


>gb|AAC14323.1| TSI1 [Nicotiana tabacum]
          Length = 251

 Score =  150 bits (378), Expect = 9e-34
 Identities = 106/265 (40%), Positives = 137/265 (51%), Gaps = 11/265 (4%)
 Frame = -1

Query: 914 VKFSEHVLTTTKLVHHQKS-----SKIRHKVVRIIVTDVDATXXXXXXXXEGKFVRRVKR 750
           VKFS+H++T  K V  Q       SK   +VVRII+TD DAT        +   VRRVKR
Sbjct: 16  VKFSQHIVTKNKHVPEQNENSNFHSKFLQRVVRIILTDADATDSSDDEGQDT--VRRVKR 73

Query: 749 HVREIDIKLQQQEVKLVLGTEKSKKKRKMIKLXXXXXXXXXXXXXXXXXXXXXQRKKYRG 570
           HV EI++      +         +KKR+++                       +RKK+RG
Sbjct: 74  HVTEINLMPSPNLI--------CEKKRRLVS----------------PDTDVTRRKKFRG 109

Query: 569 VRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFPTT---- 402
           VRQRPWGRWAAEIRDPT  KR+WLGT++T EEAA  YD AA+ LKG +A+TNFP      
Sbjct: 110 VRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAIVYDAAAVKLKGPDAVTNFPKVLTAD 169

Query: 401 -PPDHFYSKSASASEEDVSVKSPTSVL-NGDFFPFSPFTYXXXXXXXXXXXDLPLTLPDI 228
                  +     SE D ++ SPTSVL N DF P     +            L   LP+ 
Sbjct: 170 ITEMESVTDRGEKSENDFAL-SPTSVLRNDDFTPSDDLGFCEVDAFGFDVDSL-FRLPEF 227

Query: 227 ELPKRYAAVGEEEFGEFDVDYFSVE 153
            L ++Y     +EFGEFD D F++E
Sbjct: 228 GLSEKYYG---DEFGEFDFDDFALE 249


>ref|XP_002319978.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222858354|gb|EEE95901.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 313

 Score =  145 bits (367), Expect = 2e-32
 Identities = 93/222 (41%), Positives = 125/222 (56%), Gaps = 19/222 (8%)
 Frame = -1

Query: 932 MTISPPVKFSEHVLTTTKLVHHQK---SSKIRHKVVRIIVTDVDATXXXXXXXXEG---K 771
           M++ P VKF+EHV  T+KL+ +Q+   SS+ R ++VRII TD DAT        E    K
Sbjct: 1   MSVQPKVKFTEHVFITSKLIENQQLHPSSRTRQRLVRIIHTDPDATDSSSDEEEEEQERK 60

Query: 770 FVRRVKRHVREIDIKLQQQEVKLVLGTEKS------KKKRKMIKLXXXXXXXXXXXXXXX 609
           +V+RVKR V EI +  Q+        +  S      ++KR   +L               
Sbjct: 61  YVKRVKRQVSEISLLEQETTAPAAPSSTTSNDDQEPRRKRPSSRLPLPDVSR-------- 112

Query: 608 XXXXXXQRKKYRGVRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGS 429
                  +KK+RGVRQRPWG+W+AEIRDPT RKR+WLGTF+TAEEAA  YD AA+ LKG 
Sbjct: 113 -------QKKFRGVRQRPWGKWSAEIRDPTRRKRVWLGTFDTAEEAATVYDRAALKLKGP 165

Query: 428 NAITNFPT----TPPDHFYSKSASA---SEEDVSVKSPTSVL 324
           +A+TNFPT    T   H  S S+     S E  S++   +V+
Sbjct: 166 DAVTNFPTNSVITEKAHVNSGSSDVKCESRESPSIRGTANVM 207


>ref|XP_003519293.1| PREDICTED: pathogenesis-related genes transcriptional activator
           PTI6-like [Glycine max]
          Length = 282

 Score =  131 bits (330), Expect = 3e-28
 Identities = 99/250 (39%), Positives = 124/250 (49%), Gaps = 18/250 (7%)
 Frame = -1

Query: 857 SKIRHKVVRIIVTDVDATXXXXXXXXEGKF-VRRVKRHVREIDIKLQQQEVKLVLGTEKS 681
           +K + +++RIIVTD DAT        E +    RVKR + +I+++L          +   
Sbjct: 31  TKTQRRLLRIIVTDHDATDSDSDEEEEQQQQTTRVKREITQINMQLPLSYNSSFPSSSSY 90

Query: 680 KKKRKMIKLXXXXXXXXXXXXXXXXXXXXXQRK--KYRGVRQRPWGRWAAEIRDPTLRKR 507
                                         +R+  K+RGVRQRPWGRWAAEIRDPT RKR
Sbjct: 91  YSSASACTSSEQNLKCKRPNKKPPPFSAVVRRRNNKFRGVRQRPWGRWAAEIRDPTRRKR 150

Query: 506 LWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFPTTPP----------DHFYSKSASASEE 357
           LWLGTF+TAEEAA  YD AA+ LKG NA+TNFP TP           D+  S    AS  
Sbjct: 151 LWLGTFDTAEEAATEYDRAAVKLKGPNAVTNFPLTPEAAAEAPVVSVDNL-SSDGGASYS 209

Query: 356 DVSVKSPTSVL--NGDFFPFSPFTYXXXXXXXXXXXDLPLTLPDIELPKRYAAVGEEE-- 189
           D+ V SPTSVL    D  PF  F Y           D PL+LPD+ +        +EE  
Sbjct: 210 DL-VASPTSVLAYECDSTPFDGFRY-LDVEAFEFHIDAPLSLPDVNVALTCHHGKKEEEV 267

Query: 188 -FGEFDVDYF 162
            F EFD+D F
Sbjct: 268 AFDEFDIDEF 277


Top