BLASTX nr result

ID: Coptis24_contig00000342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000342
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25376.3| unnamed protein product [Vitis vinifera]              150   2e-34
ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like ...   150   2e-34
ref|XP_002267919.1| PREDICTED: 40S ribosomal protein S26-2-like ...   148   8e-34
emb|CBI15827.3| unnamed protein product [Vitis vinifera]              148   8e-34
ref|NP_001237066.1| uncharacterized protein LOC100499862 [Glycin...   142   5e-32

>emb|CBI25376.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score =  150 bits (378), Expect = 2e-34
 Identities = 78/108 (72%), Positives = 79/108 (73%)
 Frame = -1

Query: 607 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNEGYTLPKLYAKMQYCVSC 428
           VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV + YTLPKLYAKMQYCVSC
Sbjct: 44  VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDTYTLPKLYAKMQYCVSC 103

Query: 427 AIXXXXXXXXXXXXXXXXXXXXXXXXRDDAPKPGQAPRPAGAANPVRT 284
           AI                        RDD PKPGQAPRPAG A PVRT
Sbjct: 104 AIHSHVVRVRSRTDRRKRDPPQRFRRRDDMPKPGQAPRPAGGA-PVRT 150


>ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like [Vitis vinifera]
          Length = 124

 Score =  150 bits (378), Expect = 2e-34
 Identities = 78/108 (72%), Positives = 79/108 (73%)
 Frame = -1

Query: 607 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNEGYTLPKLYAKMQYCVSC 428
           VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV + YTLPKLYAKMQYCVSC
Sbjct: 18  VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDTYTLPKLYAKMQYCVSC 77

Query: 427 AIXXXXXXXXXXXXXXXXXXXXXXXXRDDAPKPGQAPRPAGAANPVRT 284
           AI                        RDD PKPGQAPRPAG A PVRT
Sbjct: 78  AIHSHVVRVRSRTDRRKRDPPQRFRRRDDMPKPGQAPRPAGGA-PVRT 124


>ref|XP_002267919.1| PREDICTED: 40S ribosomal protein S26-2-like [Vitis vinifera]
          Length = 124

 Score =  148 bits (373), Expect = 8e-34
 Identities = 75/103 (72%), Positives = 76/103 (73%)
 Frame = -1

Query: 607 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNEGYTLPKLYAKMQYCVSC 428
           VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV + YTLPKLYAKMQYCVSC
Sbjct: 18  VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDTYTLPKLYAKMQYCVSC 77

Query: 427 AIXXXXXXXXXXXXXXXXXXXXXXXXRDDAPKPGQAPRPAGAA 299
           AI                        RDD PKPGQAPRPAGAA
Sbjct: 78  AIHSHVVRVRSRTDRRKRDPPLRFRRRDDMPKPGQAPRPAGAA 120


>emb|CBI15827.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  148 bits (373), Expect = 8e-34
 Identities = 75/103 (72%), Positives = 76/103 (73%)
 Frame = -1

Query: 607 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNEGYTLPKLYAKMQYCVSC 428
           VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV + YTLPKLYAKMQYCVSC
Sbjct: 46  VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDTYTLPKLYAKMQYCVSC 105

Query: 427 AIXXXXXXXXXXXXXXXXXXXXXXXXRDDAPKPGQAPRPAGAA 299
           AI                        RDD PKPGQAPRPAGAA
Sbjct: 106 AIHSHVVRVRSRTDRRKRDPPLRFRRRDDMPKPGQAPRPAGAA 148


>ref|NP_001237066.1| uncharacterized protein LOC100499862 [Glycine max]
           gi|255627229|gb|ACU13959.1| unknown [Glycine max]
          Length = 130

 Score =  142 bits (358), Expect = 5e-32
 Identities = 77/113 (68%), Positives = 78/113 (69%), Gaps = 5/113 (4%)
 Frame = -1

Query: 607 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNEGYTLPKLYAKMQYCVSC 428
           VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV E YTLPKLY KMQYCVSC
Sbjct: 18  VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSC 77

Query: 427 AI-XXXXXXXXXXXXXXXXXXXXXXXXRDDAPKP----GQAPRPAGAANPVRT 284
           AI                         RDDAP+P    GQ PRPAG A PVRT
Sbjct: 78  AIHSHVVRVRSRTDRRKREPPQRFIRRRDDAPRPGQPGGQGPRPAGTAAPVRT 130


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