BLASTX nr result

ID: Coptis24_contig00000332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000332
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592703.1| Lysine-specific demethylase 3B [Medicago tru...   148   2e-33
emb|CBI29042.3| unnamed protein product [Vitis vinifera]              145   2e-32
ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   144   2e-32
ref|XP_003615216.1| Lysine-specific demethylase 3A [Medicago tru...   144   3e-32
ref|XP_003555059.1| PREDICTED: uncharacterized protein LOC100780...   143   5e-32

>ref|XP_003592703.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|358345316|ref|XP_003636727.1| Lysine-specific
           demethylase 3B [Medicago truncatula]
           gi|355481751|gb|AES62954.1| Lysine-specific demethylase
           3B [Medicago truncatula] gi|355502662|gb|AES83865.1|
           Lysine-specific demethylase 3B [Medicago truncatula]
          Length = 1158

 Score =  148 bits (373), Expect = 2e-33
 Identities = 70/116 (60%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +3

Query: 426 DSTMCHQCQRNDKGPVVRCTKCKTKRYCHSCL-KWYPHLSHTEVVESCPVCRGNCNCKQC 602
           +S MCHQCQRNDKG VVRCTKCK KR+C  CL  WYPHL   EV E+CPVC GNCNCK C
Sbjct: 323 ESLMCHQCQRNDKGRVVRCTKCKRKRFCIPCLNNWYPHLKEEEVAEACPVCCGNCNCKAC 382

Query: 603 LRTHGNYKEKHKSERKLNKDGEHNYSKYLVHLLLPVLKQIDREQVMEKEVEAKIQG 770
           LR+    KE  K++ + N + E   SKY+V  LLP L+++D EQ++EKE+EAK QG
Sbjct: 383 LRSCALIKE-IKTKTETNNNHEFELSKYMVKELLPYLRRLDEEQMVEKEIEAKRQG 437


>emb|CBI29042.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  145 bits (365), Expect = 2e-32
 Identities = 71/134 (52%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
 Frame = +3

Query: 384 GVTRKKPTTKEDYGD-STMCHQCQRNDKGPVVRCTKCKTKRYCHSCLK-WYPHLSHTEVV 557
           GV  KK   K+   + S MCHQCQRNDKG VVRC KCK KR+C  CL+ WYPH+S   + 
Sbjct: 307 GVAVKKRGKKKWIEEVSLMCHQCQRNDKGRVVRCRKCKRKRFCIPCLETWYPHMSEEAIA 366

Query: 558 ESCPVCRGNCNCKQCLRTHGNYK---EKHKSERKLNKDGEHNYSKYLVHLLLPVLKQIDR 728
           ESCP C GNCNCK CLR  G+ K   E    + KL+ + +  +S+YL+  ++P LKQ ++
Sbjct: 367 ESCPFCSGNCNCKACLRCDGSLKKMAELDYLKMKLSDEEKFKHSRYLLQAVVPFLKQFNQ 426

Query: 729 EQVMEKEVEAKIQG 770
           EQ++EKE+EAKIQG
Sbjct: 427 EQMLEKEIEAKIQG 440


>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  144 bits (364), Expect = 2e-32
 Identities = 66/118 (55%), Positives = 85/118 (72%), Gaps = 4/118 (3%)
 Frame = +3

Query: 429 STMCHQCQRNDKGPVVRCTKCKTKRYCHSCLK-WYPHLSHTEVVESCPVCRGNCNCKQCL 605
           S MCHQCQRNDKG VVRC KCK KR+C  CL+ WYPH+S   + ESCP C GNCNCK CL
Sbjct: 485 SLMCHQCQRNDKGRVVRCRKCKRKRFCIPCLETWYPHMSEEAIAESCPFCSGNCNCKACL 544

Query: 606 RTHGNYK---EKHKSERKLNKDGEHNYSKYLVHLLLPVLKQIDREQVMEKEVEAKIQG 770
           R  G+ K   E    + KL+ + +  +S+YL+  ++P LKQ ++EQ++EKE+EAKIQG
Sbjct: 545 RCDGSLKKMAELDYLKMKLSDEEKFKHSRYLLQAVVPFLKQFNQEQMLEKEIEAKIQG 602


>ref|XP_003615216.1| Lysine-specific demethylase 3A [Medicago truncatula]
           gi|355516551|gb|AES98174.1| Lysine-specific demethylase
           3A [Medicago truncatula]
          Length = 966

 Score =  144 bits (363), Expect = 3e-32
 Identities = 70/150 (46%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
 Frame = +3

Query: 324 GRGRRSTRFKNSLKEPTPSGGVTRKKPTTKEDYGDSTMCHQCQRNDKGPVVRCTKCKTKR 503
           G G       NS+    P  G  ++ P TK    +S MCHQCQRND G VVRCTKCK KR
Sbjct: 104 GGGDDGAEKTNSISRKKPGKG--KQTPHTKWIEEESLMCHQCQRNDSGRVVRCTKCKRKR 161

Query: 504 YCHSCLK-WYPHLSHTEVVESCPVCRGNCNCKQCLRTHGNYKEKHKSERKLNKDGEHNYS 680
           YC SC+K WYP L   ++ ++CPVC GNCNCK CL++          + + N   +  +S
Sbjct: 162 YCLSCIKKWYPLLKEEQIADACPVCCGNCNCKACLKSRKLIDSIKGKKEETNDHHQAEFS 221

Query: 681 KYLVHLLLPVLKQIDREQVMEKEVEAKIQG 770
           KY++  LLP L ++D+EQ+ EKE+EAK+QG
Sbjct: 222 KYMLKALLPHLIRLDQEQMAEKEIEAKLQG 251


>ref|XP_003555059.1| PREDICTED: uncharacterized protein LOC100780803 [Glycine max]
          Length = 947

 Score =  143 bits (361), Expect = 5e-32
 Identities = 63/116 (54%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +3

Query: 426 DSTMCHQCQRNDKGPVVRCTKCKTKRYCHSCLK-WYPHLSHTEVVESCPVCRGNCNCKQC 602
           +S MCHQCQRNDKG +VRCTKCK KR+C  CL+ WYPHL   ++ + CPVC GNCNCK C
Sbjct: 235 ESLMCHQCQRNDKGRIVRCTKCKRKRFCLPCLRNWYPHLKEEDIAQECPVCCGNCNCKAC 294

Query: 603 LRTHGNYKEKHKSERKLNKDGEHNYSKYLVHLLLPVLKQIDREQVMEKEVEAKIQG 770
           LR+    K K K +   ++D +  +S +L+ +LLP L+Q+D EQ++E E+EAK+QG
Sbjct: 295 LRSDEPIK-KMKGKTNTDEDDKIEHSMHLLQVLLPYLRQLDEEQMIENEIEAKMQG 349


Top