BLASTX nr result

ID: Coptis24_contig00000330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000330
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244...   138   4e-31
emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]   138   4e-31
ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   128   4e-28
emb|CBI29042.3| unnamed protein product [Vitis vinifera]              128   6e-28
gb|AAT81741.1| jmjC domain containing protein [Oryza sativa Japo...   120   1e-25

>ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244450 [Vitis vinifera]
          Length = 896

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/152 (48%), Positives = 92/152 (60%), Gaps = 5/152 (3%)
 Frame = -3

Query: 443 LKQIDQEQVMEKEVEAKIQGISLSELEVQQSDCSDDKRVYCNNCKTSICDFHRNCANCSY 264
           L+Q D EQ ME+E+EAKIQG+S  E++VQQ+   +D+RVYCNNC+TSI DFHRNC NCSY
Sbjct: 263 LEQFDHEQEMEREIEAKIQGLSPPEIQVQQAVLREDERVYCNNCRTSIVDFHRNCPNCSY 322

Query: 263 HLCLTCCVEIRNGCLRGGDYYHGLLQKENGRLVSRADCRISCLPKEIGGLP-----EEDP 99
            LCLTCC EIRNG L+GG     +   + G+                GG P     ++  
Sbjct: 323 DLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLH------------GGKPHMPSVQKGE 370

Query: 98  ASSCTEPSPKTKVSTPSVWKVEENSRIPCPPK 3
           ++ C   S K   ST   WKV+EN  IPC PK
Sbjct: 371 SNFCVSSSSKDPGSTICEWKVKENGDIPCAPK 402


>emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]
          Length = 969

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/152 (48%), Positives = 92/152 (60%), Gaps = 5/152 (3%)
 Frame = -3

Query: 443 LKQIDQEQVMEKEVEAKIQGISLSELEVQQSDCSDDKRVYCNNCKTSICDFHRNCANCSY 264
           L+Q D EQ ME+E+EAKIQG+S  E++VQQ+   +D+RVYCNNC+TSI DFHRNC NCSY
Sbjct: 262 LEQFDHEQEMEREIEAKIQGLSPPEIQVQQAVLREDERVYCNNCRTSIVDFHRNCPNCSY 321

Query: 263 HLCLTCCVEIRNGCLRGGDYYHGLLQKENGRLVSRADCRISCLPKEIGGLP-----EEDP 99
            LCLTCC EIRNG L+GG     +   + G+                GG P     ++  
Sbjct: 322 DLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLH------------GGKPHMPSVQKGE 369

Query: 98  ASSCTEPSPKTKVSTPSVWKVEENSRIPCPPK 3
           ++ C   S K   ST   WKV+EN  IPC PK
Sbjct: 370 SNFCVSSSSKDPGSTICEWKVKENGDIPCAPK 401


>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  128 bits (322), Expect = 4e-28
 Identities = 69/155 (44%), Positives = 93/155 (60%), Gaps = 8/155 (5%)
 Frame = -3

Query: 443  LKQIDQEQVMEKEVEAKIQGISLSELEVQQSDCSDDKRVYCNNCKTSICDFHRNCANCSY 264
            LKQ +QEQ++EKE+EAKIQG+S SEL++Q+  C+ ++R YC+NC+TSI DFHR+C NCSY
Sbjct: 583  LKQFNQEQMLEKEIEAKIQGLSPSELKIQRVVCNKNERAYCDNCRTSIVDFHRSCPNCSY 642

Query: 263  HLCLTCCVEIRNGCLRGGDYYHGLLQKENGRLVSRADCRISCLPKEIGGLPEED------ 102
             LCL CC EIR+G L+GG         E   +V      +  L  +    PE        
Sbjct: 643  DLCLICCREIRDGHLQGG---------EEEVIVHVDSPGLGYLHGDKSRFPESSRRKRKL 693

Query: 101  --PASSCTEPSPKTKVSTPSVWKVEENSRIPCPPK 3
              PA++    SPK    + S W+  +N  IPCPPK
Sbjct: 694  NFPANA----SPKDHAKSMSGWEANKNGSIPCPPK 724


>emb|CBI29042.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  128 bits (321), Expect = 6e-28
 Identities = 66/147 (44%), Positives = 92/147 (62%)
 Frame = -3

Query: 443 LKQIDQEQVMEKEVEAKIQGISLSELEVQQSDCSDDKRVYCNNCKTSICDFHRNCANCSY 264
           LKQ +QEQ++EKE+EAKIQG+S SEL++Q+  C+ ++R YC+NC+TSI DFHR+C NCSY
Sbjct: 421 LKQFNQEQMLEKEIEAKIQGLSPSELKIQRVVCNKNERAYCDNCRTSIVDFHRSCPNCSY 480

Query: 263 HLCLTCCVEIRNGCLRGGDYYHGLLQKENGRLVSRADCRISCLPKEIGGLPEEDPASSCT 84
            LCL CC EIR+G L+GG       ++E+ R   + +                 PA++  
Sbjct: 481 DLCLICCREIRDGHLQGG-------EEESSRRKRKLNF----------------PANA-- 515

Query: 83  EPSPKTKVSTPSVWKVEENSRIPCPPK 3
             SPK    + S W+  +N  IPCPPK
Sbjct: 516 --SPKDHAKSMSGWEANKNGSIPCPPK 540


>gb|AAT81741.1| jmjC domain containing protein [Oryza sativa Japonica Group]
          Length = 1003

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
 Frame = -3

Query: 443 LKQIDQEQVMEKEVEAKIQGISLSELEVQQSDCSDDKRVYCNNCKTSICDFHRNCANCSY 264
           LK++ QEQ+ EKE+E ++QG+S+ E++++Q+DC  D+RVYC+ CKTSI DFHR+C  CSY
Sbjct: 339 LKELQQEQMKEKELEGRLQGVSMDEVKLEQADCDMDERVYCDRCKTSIVDFHRSCKACSY 398

Query: 263 HLCLTCCVEIRNGCLRGGDYYHGLLQKENGRLVSRADCRISCLPKEIGGLPEEDPAS-SC 87
            LCL CC E+R G + GG+    +  +E G+     +       +       E P++ +C
Sbjct: 399 DLCLACCWELRKGEIPGGEEAKSVQWEERGQKYVFGNISKDEKKRVSSKRHMETPSTETC 458

Query: 86  TEPSPKTKVSTP-SVWKVEENSRIPCPPK 3
            + +     + P  +WK   +  IPCPPK
Sbjct: 459 NDMAVAGDPNNPLLLWKANSDGSIPCPPK 487


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