BLASTX nr result

ID: Coptis24_contig00000320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000320
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285165.1| PREDICTED: uncharacterized protein LOC100253...   124   2e-26
ref|XP_002281329.1| PREDICTED: uncharacterized protein LOC100258...   124   2e-26
ref|XP_004145741.1| PREDICTED: uncharacterized protein LOC101215...   123   4e-26
emb|CAN61164.1| hypothetical protein VITISV_001394 [Vitis vinifera]   123   4e-26
emb|CAN66257.1| hypothetical protein VITISV_001236 [Vitis vinifera]   123   5e-26

>ref|XP_002285165.1| PREDICTED: uncharacterized protein LOC100253658 [Vitis vinifera]
          Length = 167

 Score =  124 bits (312), Expect = 2e-26
 Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 14/165 (8%)
 Frame = +2

Query: 20  MASFKNYLTKPTHRGL--------INPEPMFEFDESDLWNSNEVPISNADFKKSQIRSG- 172
           MAS K+Y  +P +R L        I  E + E DESD+W+S+    ++ +F+     S  
Sbjct: 1   MASGKSYYARPNYRFLSGDRDAPAITSEAVIELDESDIWSSSHS--ASPEFRNPVPSSRL 58

Query: 173 SKVPKKKSTKLVVEKGGLTASSVPINIPDWSKILKDDYNNRRXXXXXXXXXXXXX----- 337
           +K P K+      ++   T  S+P+NIPDWSKIL++DY + R                  
Sbjct: 59  AKKPSKRGES--GDRSTATVGSLPVNIPDWSKILREDYRDNRRREADDDDDDEDDDGDSS 116

Query: 338 MKVPPHEFLARQFARTGVTSFSVHEGFGRTLKGRDLSRVRDAIWK 472
            +VPPHEFLARQFART + SFSV+EG GRTLKGRDLSRVR+AIW+
Sbjct: 117 SRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWE 161


>ref|XP_002281329.1| PREDICTED: uncharacterized protein LOC100258555 isoform 1 [Vitis
           vinifera] gi|359481372|ref|XP_003632611.1| PREDICTED:
           uncharacterized protein LOC100258555 isoform 2 [Vitis
           vinifera]
          Length = 163

 Score =  124 bits (311), Expect = 2e-26
 Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 18/169 (10%)
 Frame = +2

Query: 20  MASFKNYLTKPTHRGL-----------INPEPMFEFDESDLWNSNEVPISNADFKKSQIR 166
           MA+ ++YLT+P++  L           I  +   EFDES++WNS +VP S+  FKK    
Sbjct: 1   MATRRSYLTRPSYVYLAGEKSSSNNEEITDDIGLEFDESEVWNSGQVPSSDP-FKKP--- 56

Query: 167 SGSKVPKKKSTKLVVEK--GGLTASSVPINIPDWSKILKDDYNNRRXXXXXXXXXXXXX- 337
               +P  +++K  V K  G +TA+S+P+NIPDWSKIL+DDY   +              
Sbjct: 57  ----IPSSRASKKPVSKKMGSVTATSLPVNIPDWSKILRDDYRLSQRKESDEDVDDVEED 112

Query: 338 ----MKVPPHEFLARQFARTGVTSFSVHEGFGRTLKGRDLSRVRDAIWK 472
                ++PPHE+LAR    T V SFSVHEG GRTLKGRDLSRVR+AIWK
Sbjct: 113 DDHDSRIPPHEYLAR----TRVASFSVHEGIGRTLKGRDLSRVRNAIWK 157


>ref|XP_004145741.1| PREDICTED: uncharacterized protein LOC101215539 [Cucumis sativus]
           gi|449516802|ref|XP_004165435.1| PREDICTED:
           uncharacterized protein LOC101231271 [Cucumis sativus]
          Length = 165

 Score =  123 bits (309), Expect = 4e-26
 Identities = 68/133 (51%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
 Frame = +2

Query: 86  FEFDESDLWNSNEVPISNADFKKSQIRSGSKVPKKKSTKLVVEKGGLTASSVPINIPDWS 265
           FE +ESD++NS     S     K       KV  K+S ++    GG  ASS+P+NIPDWS
Sbjct: 33  FELNESDIYNSGSTARSPTRIAKK------KVSSKRSVEVGGGGGGGGASSLPVNIPDWS 86

Query: 266 KILKDDYNNRRXXXXXXXXXXXXX----MKVPPHEFLARQFARTGVTSFSVHEGFGRTLK 433
           KILK++Y  +R                 M+VPPHEFLARQ ART + SFSVHEG GRTLK
Sbjct: 87  KILKEEYREKRSLEYADDMEEDEEEEEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLK 146

Query: 434 GRDLSRVRDAIWK 472
           GRDLSRVR+AIW+
Sbjct: 147 GRDLSRVRNAIWE 159


>emb|CAN61164.1| hypothetical protein VITISV_001394 [Vitis vinifera]
          Length = 167

 Score =  123 bits (309), Expect = 4e-26
 Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 14/165 (8%)
 Frame = +2

Query: 20  MASFKNYLTKPTHRGL--------INPEPMFEFDESDLWNSNEVPISNADFKKSQIRSG- 172
           MAS K+Y  +P +R L        I  E + E DE+D+W+S+    ++ +F+     S  
Sbjct: 1   MASGKSYYARPNYRFLSGDRDAPAITSEAVIELDETDIWSSSHS--ASPEFRNPVPSSRL 58

Query: 173 SKVPKKKSTKLVVEKGGLTASSVPINIPDWSKILKDDYNNRRXXXXXXXXXXXXX----- 337
           +K P K+      ++   T  S+P+NIPDWSKIL++DY + R                  
Sbjct: 59  AKKPSKRGES--GDRSTATVGSLPVNIPDWSKILREDYRDNRRREADDDDDDEDDDGDSS 116

Query: 338 MKVPPHEFLARQFARTGVTSFSVHEGFGRTLKGRDLSRVRDAIWK 472
            +VPPHEFLARQFART + SFSV+EG GRTLKGRDLSRVR+AIW+
Sbjct: 117 SRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWE 161


>emb|CAN66257.1| hypothetical protein VITISV_001236 [Vitis vinifera]
          Length = 163

 Score =  123 bits (308), Expect = 5e-26
 Identities = 76/169 (44%), Positives = 100/169 (59%), Gaps = 18/169 (10%)
 Frame = +2

Query: 20  MASFKNYLTKPTHRGL-----------INPEPMFEFDESDLWNSNEVPISNADFKKSQIR 166
           MA+ ++YLT+P++  L           I  +   EFDES++WNS +VP S   FKK    
Sbjct: 1   MATRRSYLTRPSYVYLAGEKSSSNNEEITDDIGLEFDESEVWNSGQVP-SPDPFKKP--- 56

Query: 167 SGSKVPKKKSTKLVVEK--GGLTASSVPINIPDWSKILKDDYNNRRXXXXXXXXXXXXX- 337
               +P  +++K  V K  G +TA+S+P+NIPDWSKIL+DDY   +              
Sbjct: 57  ----IPSSRASKKPVSKKMGSVTATSLPVNIPDWSKILRDDYRLSQRKESDEDVDDVEED 112

Query: 338 ----MKVPPHEFLARQFARTGVTSFSVHEGFGRTLKGRDLSRVRDAIWK 472
                ++PPHE+LAR    T V SFSVHEG GRTLKGRDLSRVR+AIWK
Sbjct: 113 DDHDSRIPPHEYLAR----TRVASFSVHEGIGRTLKGRDLSRVRNAIWK 157


Top