BLASTX nr result

ID: Coptis24_contig00000316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000316
         (1787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268639.1| PREDICTED: uncharacterized protein LOC100250...   176   1e-41
ref|XP_004155347.1| PREDICTED: uncharacterized LOC101209663 [Cuc...   168   5e-39
ref|XP_002311585.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38
ref|XP_004138125.1| PREDICTED: uncharacterized protein LOC101211...   158   5e-36
ref|XP_002318638.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-36

>ref|XP_002268639.1| PREDICTED: uncharacterized protein LOC100250100 [Vitis vinifera]
            gi|296086500|emb|CBI32089.3| unnamed protein product
            [Vitis vinifera]
          Length = 175

 Score =  176 bits (447), Expect = 1e-41
 Identities = 103/183 (56%), Positives = 127/183 (69%), Gaps = 2/183 (1%)
 Frame = +3

Query: 858  MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQEEKAVN 1037
            MGNCQAIDAA+LVIQHP GR+ER YW ++  EVMRMN GHYV+L+I LP +P   +   N
Sbjct: 1    MGNCQAIDAAALVIQHPCGRIERLYWTVSAGEVMRMNPGHYVSLIIPLP-IPQDHDTPDN 59

Query: 1038 HGEGVGIRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGLWEXXXXXXXXXXEFQSTERPL 1217
                  +R+TRVKLLRPTD+LVLG AYRLITS++VMK L            + +S E+ L
Sbjct: 60   K----TVRFTRVKLLRPTDTLVLGHAYRLITSQEVMKVL-RAKKYAKMKKNQVESAEK-L 113

Query: 1218 ERVQEKKDLQHEMEAKRRSESEKMNQPVKHERNRQKTPS--SASMARSRQWRPSLQSISE 1391
            + + E++    E E   RSE EK NQ VKHER+R +T S  SA+ ARS+ WRPSLQSISE
Sbjct: 114  QGMAERQSSSCE-EDGGRSEMEKSNQVVKHERHRPRTASTTSAAAARSKSWRPSLQSISE 172

Query: 1392 AGS 1400
            AGS
Sbjct: 173  AGS 175


>ref|XP_004155347.1| PREDICTED: uncharacterized LOC101209663 [Cucumis sativus]
          Length = 169

 Score =  168 bits (425), Expect = 5e-39
 Identities = 90/184 (48%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
 Frame = +3

Query: 858  MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQEEKAVN 1037
            MGNCQA+DAA+LVIQHPSGR+ER YWP+  SEVMR N GHYV+L+I LP      +   +
Sbjct: 1    MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLP------QSEDD 54

Query: 1038 HGEGVGIRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGLWEXXXXXXXXXXEFQSTERPL 1217
            + E   +R+TRVKLLRP D+L LG AYRL+T+++VMK L            ++  +++PL
Sbjct: 55   NREPKTVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVL---------RAKKYAKSKKPL 105

Query: 1218 ERVQEKKD--LQHEMEAKRRSESEKMNQPVKHERNRQKTP-SSASMARSRQWRPSLQSIS 1388
               +EK    ++         ++EK  Q VKHER+R + P ++ + ARSR WRPSLQSIS
Sbjct: 106  PESEEKPQTVMEERSAGDEEEDTEKNQQAVKHERHRIRAPVANTTAARSRAWRPSLQSIS 165

Query: 1389 EAGS 1400
            EA S
Sbjct: 166  EAAS 169


>ref|XP_002311585.1| predicted protein [Populus trichocarpa] gi|222851405|gb|EEE88952.1|
            predicted protein [Populus trichocarpa]
          Length = 180

 Score =  166 bits (421), Expect = 1e-38
 Identities = 90/184 (48%), Positives = 124/184 (67%), Gaps = 3/184 (1%)
 Frame = +3

Query: 858  MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQEEKAVN 1037
            MGNCQAIDAA+LVIQHPSG++ER YWP++VSEVMRMN GHYV+L+I LP    QE    N
Sbjct: 1    MGNCQAIDAAALVIQHPSGKIERLYWPVSVSEVMRMNPGHYVSLIIPLPVSGDQE----N 56

Query: 1038 HGEGVGIRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGLWEXXXXXXXXXXEFQSTERPL 1217
                  +++TRVKLLRP+DSL LG AYRL+T+++VMK +            + +S +   
Sbjct: 57   QEHIKTVQFTRVKLLRPSDSLTLGHAYRLVTTQEVMKVIRAKKYAKLKRQQQPESVDENK 116

Query: 1218 ERVQ--EKKDLQHEMEAKRRSESEKMNQPVKHERNRQKTPS-SASMARSRQWRPSLQSIS 1388
             ++Q   +K    + EA+++  +EK  +  KH R+  +TPS +++  RS+ WRPSLQSIS
Sbjct: 117  SQLQVAPEKKRSTDCEAEKKPNTEKDCKEPKHRRHGHRTPSINSASLRSKSWRPSLQSIS 176

Query: 1389 EAGS 1400
            EA S
Sbjct: 177  EAAS 180


>ref|XP_004138125.1| PREDICTED: uncharacterized protein LOC101211887 [Cucumis sativus]
            gi|449477386|ref|XP_004155008.1| PREDICTED:
            uncharacterized LOC101211887 [Cucumis sativus]
          Length = 188

 Score =  158 bits (399), Expect = 5e-36
 Identities = 89/189 (47%), Positives = 117/189 (61%), Gaps = 8/189 (4%)
 Frame = +3

Query: 858  MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVIT----LPALPSQEE 1025
            MGNCQAIDAA+LVIQHPSG+ ++ YWP+T  E+M+MN GHYVAL+I+     P   +   
Sbjct: 1    MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60

Query: 1026 KAVNHGEGVGIRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGLWEXXXXXXXXXXEFQST 1205
            +  N      +R TR+KLLRP D LVLGQ YRLIT+++VMKGL            + ++ 
Sbjct: 61   QTSNETSSNSVRLTRIKLLRPADMLVLGQVYRLITTQEVMKGL-SAKKQAKVKQSQLEAA 119

Query: 1206 ERPLERVQE-KKDLQHEMEAKRRSESEKMNQPVKHERN---RQKTPSSASMARSRQWRPS 1373
            ++P  R Q   +       A  RS SE   Q  KHE+N   R  T ++++ ARSR W+PS
Sbjct: 120  DKPDRRKQRTTRSSDAAAAAAGRSVSEDQIQANKHEKNNRPRTSTSTTSATARSRTWQPS 179

Query: 1374 LQSISEAGS 1400
            L SISEAGS
Sbjct: 180  LHSISEAGS 188


>ref|XP_002318638.1| predicted protein [Populus trichocarpa] gi|222859311|gb|EEE96858.1|
            predicted protein [Populus trichocarpa]
          Length = 176

 Score =  158 bits (399), Expect = 5e-36
 Identities = 95/184 (51%), Positives = 122/184 (66%), Gaps = 3/184 (1%)
 Frame = +3

Query: 858  MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQ---EEK 1028
            MGNCQAIDAA+LVIQ+PSG+ E FYWP++ SEVM+MN GHYVAL+++    P+    E  
Sbjct: 1    MGNCQAIDAATLVIQYPSGKAENFYWPVSASEVMKMNPGHYVALLLSTNLYPTNNNGECP 60

Query: 1029 AVNHGEGVGIRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGLWEXXXXXXXXXXEFQSTE 1208
            A        +R TR+KLLRPTD+LVLG  YRLITS++VMK L            E  S E
Sbjct: 61   ANTTANNTPLRVTRIKLLRPTDTLVLGHVYRLITSQEVMKVLC-AKKQAKLKKNEPGSEE 119

Query: 1209 RPLERVQEKKDLQHEMEAKRRSESEKMNQPVKHERNRQKTPSSASMARSRQWRPSLQSIS 1388
            +P ERV+EK+    + +A RRSE +K NQ          + +SA++ARSR W+PSL+SIS
Sbjct: 120  KP-ERVKEKQGSGLDTKA-RRSEQQKENQTT-------TSTNSAAIARSRAWQPSLRSIS 170

Query: 1389 EAGS 1400
            EAGS
Sbjct: 171  EAGS 174


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