BLASTX nr result

ID: Coptis24_contig00000315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000315
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucu...    59   3e-07
ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativu...    59   3e-07
ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu...    59   3e-07
ref|NP_001066688.1| Os12g0438000 [Oryza sativa Japonica Group] g...    59   3e-07
ref|NP_001059914.1| Os07g0545300 [Oryza sativa Japonica Group] g...    59   3e-07

>ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucumis sativus]
           gi|449522341|ref|XP_004168185.1| PREDICTED: probable
           histone H2A.1-like [Cucumis sativus]
          Length = 135

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 135 AGLQFPVGRIARFLKAGKYAERVGAGAP 218
           AGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 23  AGLQFPVGRIARFLKAGKYAERVGAGAP 50


>ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativus]
           gi|449528788|ref|XP_004171385.1| PREDICTED: histone
           H2AX-like [Cucumis sativus]
          Length = 139

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 135 AGLQFPVGRIARFLKAGKYAERVGAGAP 218
           AGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 26  AGLQFPVGRIARFLKAGKYAERVGAGAP 53


>ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus]
           gi|449485770|ref|XP_004157270.1| PREDICTED: probable
           histone H2AXb-like [Cucumis sativus]
          Length = 140

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 135 AGLQFPVGRIARFLKAGKYAERVGAGAP 218
           AGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 27  AGLQFPVGRIARFLKAGKYAERVGAGAP 54


>ref|NP_001066688.1| Os12g0438000 [Oryza sativa Japonica Group]
           gi|108936005|sp|Q2QS71.1|H2A7_ORYSJ RecName:
           Full=Probable histone H2A.7
           gi|158513340|sp|A2ZK29.1|H2A7_ORYSI RecName:
           Full=Probable histone H2A.7 gi|77555213|gb|ABA98009.1|
           Histone H2A, putative, expressed [Oryza sativa Japonica
           Group] gi|113649195|dbj|BAF29707.1| Os12g0438000 [Oryza
           sativa Japonica Group] gi|125536475|gb|EAY82963.1|
           hypothetical protein OsI_38186 [Oryza sativa Indica
           Group] gi|215701106|dbj|BAG92530.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215765144|dbj|BAG86841.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 135

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 135 AGLQFPVGRIARFLKAGKYAERVGAGAP 218
           AGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 23  AGLQFPVGRIARFLKAGKYAERVGAGAP 50


>ref|NP_001059914.1| Os07g0545300 [Oryza sativa Japonica Group]
           gi|75294329|sp|Q6ZL43.1|H2A1_ORYSJ RecName:
           Full=Probable histone H2A.1
           gi|158513162|sp|A2YMC5.2|H2A1_ORYSI RecName:
           Full=Probable histone H2A.1 gi|34393263|dbj|BAC83133.1|
           histone H2A [Oryza sativa Japonica Group]
           gi|113611450|dbj|BAF21828.1| Os07g0545300 [Oryza sativa
           Japonica Group] gi|125600614|gb|EAZ40190.1| hypothetical
           protein OsJ_24635 [Oryza sativa Japonica Group]
           gi|194708692|gb|ACF88430.1| unknown [Zea mays]
           gi|195618282|gb|ACG30971.1| histone H2A.2 [Zea mays]
           gi|195619646|gb|ACG31653.1| histone H2A.2 [Zea mays]
           gi|195621644|gb|ACG32652.1| histone H2A.2 [Zea mays]
           gi|195623090|gb|ACG33375.1| histone H2A.2 [Zea mays]
           gi|195623260|gb|ACG33460.1| histone H2A.2 [Zea mays]
           gi|215704710|dbj|BAG94338.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199798|gb|EEC82225.1| hypothetical protein
           OsI_26380 [Oryza sativa Indica Group]
           gi|238013162|gb|ACR37616.1| unknown [Zea mays]
           gi|414590491|tpg|DAA41062.1| TPA: histone H2A [Zea mays]
          Length = 135

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 135 AGLQFPVGRIARFLKAGKYAERVGAGAP 218
           AGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 23  AGLQFPVGRIARFLKAGKYAERVGAGAP 50


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