BLASTX nr result

ID: Coptis24_contig00000306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000306
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525706.1| conserved hypothetical protein [Ricinus comm...    64   6e-08
gb|AAT81473.1| dehydrin 13 [Hordeum vulgare subsp. vulgare] gi|3...    63   1e-07
tpg|DAA50632.1| TPA: dehydrin 13 isoform 1 [Zea mays] gi|4148720...    62   2e-07
gb|AFK45980.1| unknown [Medicago truncatula]                           61   4e-07
gb|ACG26595.1| dehydrin 13 [Zea mays] gi|195611230|gb|ACG27445.1...    61   4e-07

>ref|XP_002525706.1| conserved hypothetical protein [Ricinus communis]
           gi|20330086|emb|CAC84735.1| iron transport protein 2
           [Ricinus communis] gi|223535006|gb|EEF36689.1| conserved
           hypothetical protein [Ricinus communis]
          Length = 96

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 30/58 (51%), Positives = 39/58 (67%)
 Frame = +3

Query: 42  MAGIMNKIGDALHIGGNKEEQKHGEAQKHDQQLKPGGEPHKKQGEQKEGFLEKIKDKV 215
           MAGIM+KI + LHIGG+KEE K     +H       G+  K +GE KEGF++KIKDK+
Sbjct: 1   MAGIMHKIEETLHIGGHKEEHKGESHDQHKHDQHAHGDHPKPEGEHKEGFMDKIKDKI 58


>gb|AAT81473.1| dehydrin 13 [Hordeum vulgare subsp. vulgare]
           gi|326524057|dbj|BAJ97039.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 107

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = +3

Query: 42  MAGIMNKIGDALHIGGNKEEQKHGEAQKHDQQLKPGGEPHKKQGEQKEGFLEKIKDKVS 218
           MAGI++KI + LH+GG+ +E K  +  K  ++ K     HKK GE KEG +EKIKDK+S
Sbjct: 1   MAGIIHKIEEKLHMGGSSDEHKKDDEHKKAEEHKKKDGEHKKDGEHKEGMMEKIKDKIS 59


>tpg|DAA50632.1| TPA: dehydrin 13 isoform 1 [Zea mays] gi|414872076|tpg|DAA50633.1|
           TPA: dehydrin 13 isoform 2 [Zea mays]
           gi|414872077|tpg|DAA50634.1| TPA: dehydrin 13 isoform 3
           [Zea mays] gi|414872078|tpg|DAA50635.1| TPA: dehydrin 13
           isoform 4 [Zea mays]
          Length = 201

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
 Frame = +3

Query: 30  KSLKMAGIMNKIGDALHIGG---NKEEQKHGEAQKHDQQLKPGGEPHKKQG-EQKEGFLE 197
           +++ M+GI++KI + LH+GG   NKEE+ H +A++H +  K  GE HKK G E KEG +E
Sbjct: 98  RAVAMSGIIHKIEEKLHMGGDHKNKEEEHHKKAEEHHK--KEEGEHHKKDGGEHKEGIVE 155

Query: 198 KIKDKVS 218
           KIKDK++
Sbjct: 156 KIKDKIT 162


>gb|AFK45980.1| unknown [Medicago truncatula]
          Length = 100

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
 Frame = +3

Query: 42  MAGIMNKIGDALHI-GGNKEEQKHGEAQKHDQQLKPGGEPH--KKQGEQKEGFLEKIKDK 212
           MAGI+NKIG+ALH+ GG+K+E +H   + HD + K G + H  K +GE KEG ++KIKDK
Sbjct: 1   MAGIINKIGEALHVGGGHKKEDEHKGEKSHDDEHK-GEKSHDDKHKGEHKEGIVDKIKDK 59

Query: 213 V 215
           +
Sbjct: 60  I 60


>gb|ACG26595.1| dehydrin 13 [Zea mays] gi|195611230|gb|ACG27445.1| dehydrin 13 [Zea
           mays]
          Length = 103

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
 Frame = +3

Query: 42  MAGIMNKIGDALHIGG---NKEEQKHGEAQKHDQQLKPGGEPHKKQG-EQKEGFLEKIKD 209
           M+GI++KI + LH+GG   NKEE+ H +A++H +  K  GE HKK G E KEG +EKIKD
Sbjct: 1   MSGIIHKIEEKLHMGGDHKNKEEEHHKKAEEHHK--KEEGEHHKKDGGEHKEGIVEKIKD 58

Query: 210 KVS 218
           K++
Sbjct: 59  KIT 61


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