BLASTX nr result

ID: Coptis24_contig00000302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000302
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]            560   e-157
gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]             559   e-157
ref|XP_002528028.1| elongation factor 1-alpha, putative [Ricinus...   556   e-156
ref|XP_002528020.1| elongation factor 1-alpha, putative [Ricinus...   556   e-156
ref|XP_003558459.1| PREDICTED: elongation factor 1-alpha-like is...   556   e-156

>gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]
          Length = 447

 Score =  560 bits (1444), Expect = e-157
 Identities = 272/282 (96%), Positives = 281/282 (99%)
 Frame = +2

Query: 2   DSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYEEIVKEVSS 181
           DSTTGGFEAGISKDGQTREHALLAFTLGV+QMICCCNKMDATTPKYSKARY+EIVKEVSS
Sbjct: 117 DSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSS 176

Query: 182 YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPTDKPLRL 361
           YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQINEPKRP+DKPLRL
Sbjct: 177 YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRL 236

Query: 362 PLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNV 541
           PLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGPTGLTTEVKSVEMHHEAL EALPGDNV
Sbjct: 237 PLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALLEALPGDNV 296

Query: 542 GFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHI 721
           GFNVKNVAVKDLKRGFVASNSK+DPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHI
Sbjct: 297 GFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 356

Query: 722 AVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKPM 847
           AVKFGEILTKIDRRSGKE+EKEPKFLKNGDAG+VKMLPTKPM
Sbjct: 357 AVKFGEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKPM 398


>gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]
          Length = 447

 Score =  559 bits (1440), Expect = e-157
 Identities = 270/282 (95%), Positives = 281/282 (99%)
 Frame = +2

Query: 2   DSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYEEIVKEVSS 181
           DSTTGGFEAGISKDGQTREHALLAFTLGV+QMICCCNKMDATTPKYSKARY+EIVKEVSS
Sbjct: 117 DSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSS 176

Query: 182 YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPTDKPLRL 361
           YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRP+DKPLRL
Sbjct: 177 YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRL 236

Query: 362 PLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNV 541
           PLQDVYKIGGIGTVPVGRVETG++KPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNV
Sbjct: 237 PLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNV 296

Query: 542 GFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHI 721
           GFNVKNVAVKDLKRGFVASNSK+DPA+EAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHI
Sbjct: 297 GFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 356

Query: 722 AVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKPM 847
           AVKFGEILTKIDRRSGKE+EKEPKFLKNGDAG+VKMLPTKPM
Sbjct: 357 AVKFGEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKPM 398


>ref|XP_002528028.1| elongation factor 1-alpha, putative [Ricinus communis]
           gi|223532558|gb|EEF34346.1| elongation factor 1-alpha,
           putative [Ricinus communis]
          Length = 449

 Score =  556 bits (1433), Expect = e-156
 Identities = 270/282 (95%), Positives = 279/282 (98%)
 Frame = +2

Query: 2   DSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYEEIVKEVSS 181
           DSTTGGFEAGISKDGQTREHALLAFTLGV+QMICCCNKMDATTPKYSKARY+EIVKEVSS
Sbjct: 117 DSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSS 176

Query: 182 YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPTDKPLRL 361
           YLKKVGYNPDKI FVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQINEPKRPTDKPLRL
Sbjct: 177 YLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRL 236

Query: 362 PLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNV 541
           PLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGP+GLTTEVKSVEMHHEALQEALPGDNV
Sbjct: 237 PLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 296

Query: 542 GFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHI 721
           GFNVKNVAVKDLKRGFVASNSK+DPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHI
Sbjct: 297 GFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 356

Query: 722 AVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKPM 847
           AVKF EILTKIDRRSGKE+EKEPKFLKNGDAG VKM+PTKPM
Sbjct: 357 AVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPM 398


>ref|XP_002528020.1| elongation factor 1-alpha, putative [Ricinus communis]
           gi|223532550|gb|EEF34338.1| elongation factor 1-alpha,
           putative [Ricinus communis]
          Length = 348

 Score =  556 bits (1433), Expect = e-156
 Identities = 270/282 (95%), Positives = 279/282 (98%)
 Frame = +2

Query: 2   DSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYEEIVKEVSS 181
           DSTTGGFEAGISKDGQTREHALLAFTLGV+QMICCCNKMDATTPKYSKARY+EIVKEVSS
Sbjct: 16  DSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSS 75

Query: 182 YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPTDKPLRL 361
           YLKKVGYNPDKI FVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQINEPKRPTDKPLRL
Sbjct: 76  YLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRL 135

Query: 362 PLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNV 541
           PLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGP+GLTTEVKSVEMHHEALQEALPGDNV
Sbjct: 136 PLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 195

Query: 542 GFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHI 721
           GFNVKNVAVKDLKRGFVASNSK+DPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHI
Sbjct: 196 GFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 255

Query: 722 AVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKPM 847
           AVKF EILTKIDRRSGKE+EKEPKFLKNGDAG VKM+PTKPM
Sbjct: 256 AVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPM 297


>ref|XP_003558459.1| PREDICTED: elongation factor 1-alpha-like isoform 1 [Brachypodium
           distachyon] gi|357113338|ref|XP_003558460.1| PREDICTED:
           elongation factor 1-alpha-like isoform 2 [Brachypodium
           distachyon] gi|357113340|ref|XP_003558461.1| PREDICTED:
           elongation factor 1-alpha-like isoform 3 [Brachypodium
           distachyon] gi|357113342|ref|XP_003558462.1| PREDICTED:
           elongation factor 1-alpha-like isoform 4 [Brachypodium
           distachyon] gi|357113344|ref|XP_003558463.1| PREDICTED:
           elongation factor 1-alpha-like isoform 5 [Brachypodium
           distachyon] gi|357113346|ref|XP_003558464.1| PREDICTED:
           elongation factor 1-alpha-like isoform 6 [Brachypodium
           distachyon] gi|357156020|ref|XP_003577316.1| PREDICTED:
           elongation factor 1-alpha-like isoform 1 [Brachypodium
           distachyon] gi|357156023|ref|XP_003577317.1| PREDICTED:
           elongation factor 1-alpha-like isoform 2 [Brachypodium
           distachyon] gi|357156026|ref|XP_003577318.1| PREDICTED:
           elongation factor 1-alpha-like isoform 3 [Brachypodium
           distachyon] gi|357156029|ref|XP_003577319.1| PREDICTED:
           elongation factor 1-alpha-like isoform 4 [Brachypodium
           distachyon] gi|357156032|ref|XP_003577320.1| PREDICTED:
           elongation factor 1-alpha-like isoform 5 [Brachypodium
           distachyon] gi|357156035|ref|XP_003577321.1| PREDICTED:
           elongation factor 1-alpha-like isoform 6 [Brachypodium
           distachyon] gi|357168525|ref|XP_003581689.1| PREDICTED:
           elongation factor 1-alpha-like [Brachypodium distachyon]
          Length = 447

 Score =  556 bits (1432), Expect = e-156
 Identities = 267/282 (94%), Positives = 280/282 (99%)
 Frame = +2

Query: 2   DSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYEEIVKEVSS 181
           DSTTGGFEAGISKDGQTREHALLAFTLGV+QMICCCNKMDATTPKYSKARY+EIVKEVSS
Sbjct: 117 DSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSS 176

Query: 182 YLKKVGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPTDKPLRL 361
           YLKKVGYNPDK+ FVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQINEPKRP+DKPLRL
Sbjct: 177 YLKKVGYNPDKVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRL 236

Query: 362 PLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNV 541
           PLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNV
Sbjct: 237 PLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFGPTGLTTEVKSVEMHHEALQEALPGDNV 296

Query: 542 GFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHI 721
           GFNVKNVAVKDLKRGFVASNSK+DPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHI
Sbjct: 297 GFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 356

Query: 722 AVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKPM 847
           AVKF E++TKIDRRSGKE+EKEPKFLKNGDAGIVKM+PTKPM
Sbjct: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGIVKMIPTKPM 398


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